EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000452 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 14930 bases
Position: chrJH422284.1:8485832-8500761
Accession: 102786646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000606	Ago_hook	PF10427.9	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000648	-	4527	XM_006787443	ENSNBRP00000000606	1508 (aa)	XP_006787506	-

Gene Model

Click here to download ENSNBRG00000000452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000452	tnrc6c2	100	52.339	ENSNBRG00000005344	tnrc6c1	94	52.952

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000452	tnrc6c2	100	88.355	ENSATEG00000003656	tnrc6c2	100	89.020	Anabas_testudineus
ENSNBRG00000000452	tnrc6c2	57	95.022	ENSACLG00000006469	tnrc6c2	84	99.230	Astatotilapia_calliptera
ENSNBRG00000000452	tnrc6c2	100	57.839	ENSAMXG00000009579	tnrc6c2	99	56.780	Astyanax_mexicanus
ENSNBRG00000000452	tnrc6c2	100	58.784	ENSDARG00000103851	tnrc6c2	100	55.788	Danio_rerio
ENSNBRG00000000452	tnrc6c2	100	60.454	ENSELUG00000007206	tnrc6c2	99	61.239	Esox_lucius
ENSNBRG00000000452	tnrc6c2	95	55.918	ENSELUG00000008149	-	84	67.929	Esox_lucius
ENSNBRG00000000452	tnrc6c2	57	85.951	ENSFHEG00000003901	tnrc6c2	96	87.047	Fundulus_heteroclitus
ENSNBRG00000000452	tnrc6c2	100	76.069	ENSGACG00000019401	tnrc6c2	90	75.449	Gasterosteus_aculeatus
ENSNBRG00000000452	tnrc6c2	57	95.022	ENSHBUG00000018310	tnrc6c2	83	99.230	Haplochromis_burtoni
ENSNBRG00000000452	tnrc6c2	57	85.011	ENSHCOG00000017802	tnrc6c2	83	85.120	Hippocampus_comes
ENSNBRG00000000452	tnrc6c2	100	53.127	ENSIPUG00000022767	tnrc6c2	99	51.325	Ictalurus_punctatus
ENSNBRG00000000452	tnrc6c2	57	88.877	ENSMAMG00000001718	tnrc6c2	95	88.987	Mastacembelus_armatus
ENSNBRG00000000452	tnrc6c2	57	95.022	ENSMZEG00005023905	tnrc6c2	84	99.384	Maylandia_zebra
ENSNBRG00000000452	tnrc6c2	57	88.634	ENSMALG00000020932	tnrc6c2	95	88.197	Monopterus_albus
ENSNBRG00000000452	tnrc6c2	97	92.436	ENSONIG00000018123	tnrc6c2	100	92.308	Oreochromis_niloticus
ENSNBRG00000000452	tnrc6c2	57	86.364	ENSORLG00000003327	tnrc6c2	83	86.031	Oryzias_latipes
ENSNBRG00000000452	tnrc6c2	57	86.253	ENSORLG00020010730	tnrc6c2	87	77.356	Oryzias_latipes_hni
ENSNBRG00000000452	tnrc6c2	57	86.475	ENSORLG00015009232	tnrc6c2	83	86.142	Oryzias_latipes_hsok
ENSNBRG00000000452	tnrc6c2	57	87.583	ENSOMEG00000017952	tnrc6c2	83	87.361	Oryzias_melastigma
ENSNBRG00000000452	tnrc6c2	99	75.639	ENSPFOG00000011590	tnrc6c2	90	75.833	Poecilia_formosa
ENSNBRG00000000452	tnrc6c2	100	78.266	ENSPLAG00000006992	tnrc6c2	100	78.487	Poecilia_latipinna
ENSNBRG00000000452	tnrc6c2	100	77.461	ENSPMEG00000012946	tnrc6c2	100	77.805	Poecilia_mexicana
ENSNBRG00000000452	tnrc6c2	100	79.436	ENSPREG00000015823	tnrc6c2	100	79.310	Poecilia_reticulata
ENSNBRG00000000452	tnrc6c2	57	94.912	ENSPNYG00000002582	tnrc6c2	95	96.779	Pundamilia_nyererei
ENSNBRG00000000452	tnrc6c2	57	73.046	ENSPNAG00000026838	tnrc6c2	57	72.469	Pygocentrus_nattereri
ENSNBRG00000000452	tnrc6c2	57	86.909	ENSSMAG00000015145	tnrc6c2	95	86.909	Scophthalmus_maximus
ENSNBRG00000000452	tnrc6c2	57	90.749	ENSSDUG00000020741	tnrc6c2	95	90.639	Seriola_dumerili
ENSNBRG00000000452	tnrc6c2	57	90.529	ENSSLDG00000002077	tnrc6c2	95	90.419	Seriola_lalandi_dorsalis
ENSNBRG00000000452	tnrc6c2	57	90.659	ENSSPAG00000013052	tnrc6c2	83	91.429	Stegastes_partitus
ENSNBRG00000000452	tnrc6c2	100	73.971	ENSTNIG00000004178	tnrc6c2	95	74.694	Tetraodon_nigroviridis
ENSNBRG00000000452	tnrc6c2	100	76.994	ENSXCOG00000013252	tnrc6c2	100	77.730	Xiphophorus_couchianus
ENSNBRG00000000452	tnrc6c2	100	74.367	ENSXMAG00000006739	tnrc6c2	96	86.842	Xiphophorus_maculatus