EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000000619 (Gene tree)
Gene ID: 102782273
Gene Symbol: naa38
Alias: Mak31|fj33f12|lsmd1|si:ch211-30g3.3|wu:fj33f12
Full Name: LSM domain-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5154 bases
Position: chrJH422355.1:383008-388161
Accession: 102782273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000679	LSM	PF01423.22	4.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000725	-	2352	XM_006801698	ENSNBRP00000000679	112 (aa)	XP_006801761	UPI00022AFBE0

Gene Model

Click here to download ENSNBRG00000000619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000619	naa38	79	76.136	ENSG00000183011	NAA38	92	83.582	Homo_sapiens
ENSNBRG00000000619	naa38	100	98.214	ENSAPOG00000005647	naa38	100	98.214	Acanthochromis_polyacanthus
ENSNBRG00000000619	naa38	69	100.000	ENSACIG00000019730	naa38	100	100.000	Amphilophus_citrinellus
ENSNBRG00000000619	naa38	100	98.214	ENSAOCG00000023811	naa38	100	98.214	Amphiprion_ocellaris
ENSNBRG00000000619	naa38	100	97.321	ENSAPEG00000006441	naa38	100	97.321	Amphiprion_percula
ENSNBRG00000000619	naa38	100	92.857	ENSATEG00000001072	naa38	100	91.071	Anabas_testudineus
ENSNBRG00000000619	naa38	75	78.571	ENSACAG00000004477	NAA38	67	79.518	Anolis_carolinensis
ENSNBRG00000000619	naa38	79	76.136	ENSANAG00000027273	NAA38	66	73.034	Aotus_nancymaae
ENSNBRG00000000619	naa38	100	100.000	ENSACLG00000009549	naa38	100	100.000	Astatotilapia_calliptera
ENSNBRG00000000619	naa38	93	78.505	ENSAMXG00000037469	naa38	81	88.235	Astyanax_mexicanus
ENSNBRG00000000619	naa38	79	76.404	ENSBTAG00000014695	NAA38	63	82.278	Bos_taurus
ENSNBRG00000000619	naa38	75	34.524	WBGene00021682	Y48G1C.9	73	35.065	Caenorhabditis_elegans
ENSNBRG00000000619	naa38	79	76.136	ENSCJAG00000014843	NAA38	66	73.034	Callithrix_jacchus
ENSNBRG00000000619	naa38	76	53.125	ENSCAFG00000032682	-	51	56.322	Canis_familiaris
ENSNBRG00000000619	naa38	76	53.125	ENSCAFG00020007495	-	51	56.322	Canis_lupus_dingo
ENSNBRG00000000619	naa38	79	76.404	ENSCHIG00000023618	NAA38	63	82.278	Capra_hircus
ENSNBRG00000000619	naa38	79	76.136	ENSTSYG00000033326	NAA38	63	82.278	Carlito_syrichta
ENSNBRG00000000619	naa38	79	76.136	ENSCPOG00000032412	NAA38	63	82.278	Cavia_porcellus
ENSNBRG00000000619	naa38	79	76.136	ENSCCAG00000021358	NAA38	66	73.034	Cebus_capucinus
ENSNBRG00000000619	naa38	79	76.136	ENSCATG00000032806	NAA38	80	82.278	Cercocebus_atys
ENSNBRG00000000619	naa38	77	77.907	ENSCLAG00000015879	NAA38	63	82.278	Chinchilla_lanigera
ENSNBRG00000000619	naa38	79	76.136	ENSCSAG00000011136	NAA38	63	82.278	Chlorocebus_sabaeus
ENSNBRG00000000619	naa38	79	76.136	ENSCHOG00000009659	NAA38	64	82.278	Choloepus_hoffmanni
ENSNBRG00000000619	naa38	79	76.136	ENSCANG00000038998	NAA38	80	82.278	Colobus_angolensis_palliatus
ENSNBRG00000000619	naa38	79	76.136	ENSCGRG00001016403	Naa38	63	82.278	Cricetulus_griseus_chok1gshd
ENSNBRG00000000619	naa38	86	89.583	ENSCSEG00000004480	naa38	87	91.011	Cynoglossus_semilaevis
ENSNBRG00000000619	naa38	97	90.826	ENSCVAG00000007301	naa38	100	90.826	Cyprinodon_variegatus
ENSNBRG00000000619	naa38	94	77.570	ENSDARG00000099122	naa38	96	74.286	Danio_rerio
ENSNBRG00000000619	naa38	75	78.571	ENSDNOG00000040664	-	88	82.278	Dasypus_novemcinctus
ENSNBRG00000000619	naa38	87	67.593	ENSDORG00000010169	Naa38	63	82.278	Dipodomys_ordii
ENSNBRG00000000619	naa38	84	41.489	FBgn0051950	CG31950	57	45.946	Drosophila_melanogaster
ENSNBRG00000000619	naa38	75	63.095	ENSEBUG00000002518	naa38	70	69.333	Eptatretus_burgeri
ENSNBRG00000000619	naa38	79	73.333	ENSECAG00000037837	NAA38	64	79.012	Equus_caballus
ENSNBRG00000000619	naa38	100	84.348	ENSELUG00000019427	naa38	100	81.739	Esox_lucius
ENSNBRG00000000619	naa38	79	76.136	ENSFCAG00000026713	NAA38	80	82.278	Felis_catus
ENSNBRG00000000619	naa38	77	79.070	ENSFDAG00000012656	NAA38	63	83.544	Fukomys_damarensis
ENSNBRG00000000619	naa38	97	93.578	ENSFHEG00000017032	naa38	100	88.991	Fundulus_heteroclitus
ENSNBRG00000000619	naa38	84	86.170	ENSGMOG00000013571	naa38	90	89.412	Gadus_morhua
ENSNBRG00000000619	naa38	68	72.368	ENSGALG00000054037	-	77	72.368	Gallus_gallus
ENSNBRG00000000619	naa38	68	72.368	ENSGALG00000052672	-	79	72.368	Gallus_gallus
ENSNBRG00000000619	naa38	97	93.578	ENSGAFG00000004021	naa38	100	93.578	Gambusia_affinis
ENSNBRG00000000619	naa38	96	89.815	ENSGACG00000019273	naa38	100	89.815	Gasterosteus_aculeatus
ENSNBRG00000000619	naa38	63	69.620	ENSGAGG00000002550	NAA38	98	69.620	Gopherus_agassizii
ENSNBRG00000000619	naa38	79	76.136	ENSGGOG00000015317	-	80	82.278	Gorilla_gorilla
ENSNBRG00000000619	naa38	100	100.000	ENSHBUG00000019918	naa38	100	100.000	Haplochromis_burtoni
ENSNBRG00000000619	naa38	77	79.070	ENSHGLG00000014324	NAA38	63	83.544	Heterocephalus_glaber_female
ENSNBRG00000000619	naa38	77	79.070	ENSHGLG00100013112	NAA38	63	83.544	Heterocephalus_glaber_male
ENSNBRG00000000619	naa38	100	81.250	ENSHCOG00000010193	naa38	86	81.250	Hippocampus_comes
ENSNBRG00000000619	naa38	93	74.038	ENSIPUG00000021657	naa38	100	74.038	Ictalurus_punctatus
ENSNBRG00000000619	naa38	79	76.136	ENSSTOG00000025950	NAA38	63	82.278	Ictidomys_tridecemlineatus
ENSNBRG00000000619	naa38	60	82.090	ENSJJAG00000013236	Naa38	92	82.090	Jaculus_jaculus
ENSNBRG00000000619	naa38	100	84.553	ENSKMAG00000019461	naa38	95	82.114	Kryptolebias_marmoratus
ENSNBRG00000000619	naa38	96	94.444	ENSLBEG00000028489	naa38	100	94.444	Labrus_bergylta
ENSNBRG00000000619	naa38	71	83.750	ENSLACG00000007757	NAA38	75	83.544	Latimeria_chalumnae
ENSNBRG00000000619	naa38	96	78.704	ENSLOCG00000013981	naa38	94	78.704	Lepisosteus_oculatus
ENSNBRG00000000619	naa38	79	77.273	ENSLAFG00000009169	NAA38	63	83.544	Loxodonta_africana
ENSNBRG00000000619	naa38	79	76.136	ENSMFAG00000037580	NAA38	80	82.278	Macaca_fascicularis
ENSNBRG00000000619	naa38	79	76.136	ENSMMUG00000008178	NAA38	80	82.278	Macaca_mulatta
ENSNBRG00000000619	naa38	79	76.136	ENSMNEG00000031597	NAA38	80	82.278	Macaca_nemestrina
ENSNBRG00000000619	naa38	79	76.136	ENSMLEG00000037461	NAA38	80	82.278	Mandrillus_leucophaeus
ENSNBRG00000000619	naa38	100	91.228	ENSMAMG00000000538	naa38	100	90.351	Mastacembelus_armatus
ENSNBRG00000000619	naa38	100	100.000	ENSMZEG00005021265	naa38	100	100.000	Maylandia_zebra
ENSNBRG00000000619	naa38	67	73.333	ENSMGAG00000017259	NAA38	93	73.333	Meleagris_gallopavo
ENSNBRG00000000619	naa38	79	76.136	ENSMAUG00000020052	Naa38	63	82.278	Mesocricetus_auratus
ENSNBRG00000000619	naa38	79	76.136	ENSMICG00000015147	NAA38	80	82.278	Microcebus_murinus
ENSNBRG00000000619	naa38	79	76.136	ENSMOCG00000002129	Naa38	63	82.278	Microtus_ochrogaster
ENSNBRG00000000619	naa38	100	88.496	ENSMMOG00000012705	naa38	100	88.496	Mola_mola
ENSNBRG00000000619	naa38	67	85.333	ENSMODG00000007434	NAA38	63	83.544	Monodelphis_domestica
ENSNBRG00000000619	naa38	100	89.286	ENSMALG00000001438	naa38	100	89.286	Monopterus_albus
ENSNBRG00000000619	naa38	79	76.136	MGP_CAROLIEiJ_G0016568	Naa38	63	82.278	Mus_caroli
ENSNBRG00000000619	naa38	79	76.136	ENSMUSG00000059278	Naa38	63	82.278	Mus_musculus
ENSNBRG00000000619	naa38	79	76.136	MGP_PahariEiJ_G0017699	Naa38	63	82.278	Mus_pahari
ENSNBRG00000000619	naa38	80	74.444	MGP_SPRETEiJ_G0017404	Naa38	65	80.247	Mus_spretus
ENSNBRG00000000619	naa38	79	76.136	ENSMPUG00000008886	NAA38	63	82.278	Mustela_putorius_furo
ENSNBRG00000000619	naa38	79	76.136	ENSNGAG00000019042	Naa38	63	82.278	Nannospalax_galili
ENSNBRG00000000619	naa38	79	75.000	ENSNLEG00000027601	NAA38	80	81.013	Nomascus_leucogenys
ENSNBRG00000000619	naa38	79	76.136	ENSODEG00000017702	NAA38	63	82.278	Octodon_degus
ENSNBRG00000000619	naa38	100	100.000	ENSONIG00000009306	naa38	100	100.000	Oreochromis_niloticus
ENSNBRG00000000619	naa38	79	76.136	ENSOCUG00000017284	NAA38	63	82.278	Oryctolagus_cuniculus
ENSNBRG00000000619	naa38	98	90.000	ENSORLG00000007119	naa38	82	90.000	Oryzias_latipes
ENSNBRG00000000619	naa38	98	90.909	ENSORLG00020008335	naa38	82	90.909	Oryzias_latipes_hni
ENSNBRG00000000619	naa38	89	89.000	ENSORLG00015005138	naa38	78	95.402	Oryzias_latipes_hsok
ENSNBRG00000000619	naa38	98	90.909	ENSOMEG00000013718	naa38	98	90.909	Oryzias_melastigma
ENSNBRG00000000619	naa38	79	76.136	ENSPPAG00000026097	NAA38	80	82.278	Pan_paniscus
ENSNBRG00000000619	naa38	79	76.136	ENSPTRG00000008712	NAA38	80	82.278	Pan_troglodytes
ENSNBRG00000000619	naa38	79	76.136	ENSPANG00000023935	NAA38	80	82.278	Papio_anubis
ENSNBRG00000000619	naa38	100	91.071	ENSPMGG00000008216	naa38	100	91.071	Periophthalmus_magnuspinnatus
ENSNBRG00000000619	naa38	79	76.136	ENSPEMG00000015014	Naa38	63	82.278	Peromyscus_maniculatus_bairdii
ENSNBRG00000000619	naa38	70	71.795	ENSPMAG00000006001	naa38	78	71.795	Petromyzon_marinus
ENSNBRG00000000619	naa38	97	93.578	ENSPFOG00000012670	naa38	100	93.578	Poecilia_formosa
ENSNBRG00000000619	naa38	97	93.578	ENSPLAG00000002707	naa38	100	93.578	Poecilia_latipinna
ENSNBRG00000000619	naa38	100	89.474	ENSPMEG00000016652	naa38	98	91.071	Poecilia_mexicana
ENSNBRG00000000619	naa38	86	91.667	ENSPREG00000011017	naa38	60	93.258	Poecilia_reticulata
ENSNBRG00000000619	naa38	79	76.136	ENSPCOG00000020844	NAA38	80	82.278	Propithecus_coquereli
ENSNBRG00000000619	naa38	100	100.000	ENSPNYG00000021415	naa38	100	100.000	Pundamilia_nyererei
ENSNBRG00000000619	naa38	92	78.641	ENSPNAG00000020828	naa38	100	74.074	Pygocentrus_nattereri
ENSNBRG00000000619	naa38	79	76.136	ENSRNOG00000009823	Naa38	63	82.278	Rattus_norvegicus
ENSNBRG00000000619	naa38	79	76.136	ENSRBIG00000039054	NAA38	80	82.278	Rhinopithecus_bieti
ENSNBRG00000000619	naa38	79	76.136	ENSRROG00000037370	NAA38	80	82.278	Rhinopithecus_roxellana
ENSNBRG00000000619	naa38	91	73.832	ENSSFOG00015023111	naa38	97	72.897	Scleropages_formosus
ENSNBRG00000000619	naa38	69	94.805	ENSSMAG00000006429	naa38	100	94.805	Scophthalmus_maximus
ENSNBRG00000000619	naa38	100	97.321	ENSSDUG00000005842	naa38	100	97.321	Seriola_dumerili
ENSNBRG00000000619	naa38	100	97.321	ENSSLDG00000003013	naa38	100	97.321	Seriola_lalandi_dorsalis
ENSNBRG00000000619	naa38	74	81.928	ENSSPUG00000014761	NAA38	85	81.928	Sphenodon_punctatus
ENSNBRG00000000619	naa38	100	98.214	ENSSPAG00000013671	naa38	100	98.214	Stegastes_partitus
ENSNBRG00000000619	naa38	79	77.273	ENSSSCG00000017971	NAA38	63	82.278	Sus_scrofa
ENSNBRG00000000619	naa38	100	90.179	ENSTRUG00000021566	naa38	100	90.179	Takifugu_rubripes
ENSNBRG00000000619	naa38	65	94.521	ENSTNIG00000012999	naa38	100	94.521	Tetraodon_nigroviridis
ENSNBRG00000000619	naa38	79	76.136	ENSUAMG00000005463	NAA38	63	82.278	Ursus_americanus
ENSNBRG00000000619	naa38	79	76.136	ENSVVUG00000028004	NAA38	63	82.278	Vulpes_vulpes
ENSNBRG00000000619	naa38	95	61.261	ENSXETG00000015633	naa38	92	60.909	Xenopus_tropicalis
ENSNBRG00000000619	naa38	89	86.000	ENSXCOG00000000768	naa38	66	96.154	Xiphophorus_couchianus
ENSNBRG00000000619	naa38	97	92.661	ENSXMAG00000028369	naa38	100	92.661	Xiphophorus_maculatus