EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000636 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 49805 bases
Position: chrJH422355.1:399136-448940
Accession: 102782566
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000812	ResIII	PF04851.15	4.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000866	-	3161	-	ENSNBRP00000000819	296 (aa)	-	-
ENSNBRT00000000859	-	4947	XM_006801699	ENSNBRP00000000812	1648 (aa)	XP_006801762	-

Gene Model

Click here to download ENSNBRG00000000636's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000636's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000636	chd3	98	67.458	ENSNBRG00000021576	-	91	67.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000636	chd3	98	76.016	ENSG00000170004	CHD3	85	75.396	Homo_sapiens
ENSNBRG00000000636	chd3	97	91.071	ENSAPOG00000005614	chd3	97	90.640	Acanthochromis_polyacanthus
ENSNBRG00000000636	chd3	72	77.626	ENSAMEG00000003025	-	91	76.709	Ailuropoda_melanoleuca
ENSNBRG00000000636	chd3	97	91.256	ENSACIG00000019671	chd3	100	91.256	Amphilophus_citrinellus
ENSNBRG00000000636	chd3	98	90.013	ENSAOCG00000023784	chd3	99	89.242	Amphiprion_ocellaris
ENSNBRG00000000636	chd3	98	89.946	ENSAPEG00000006341	chd3	84	89.204	Amphiprion_percula
ENSNBRG00000000636	chd3	98	89.481	ENSATEG00000000848	chd3	99	86.520	Anabas_testudineus
ENSNBRG00000000636	chd3	98	75.756	ENSACAG00000004276	CHD3	83	75.969	Anolis_carolinensis
ENSNBRG00000000636	chd3	98	74.564	ENSANAG00000034323	CHD3	92	73.427	Aotus_nancymaae
ENSNBRG00000000636	chd3	97	93.284	ENSACLG00000009222	chd3	87	93.284	Astatotilapia_calliptera
ENSNBRG00000000636	chd3	97	75.955	ENSBTAG00000014377	CHD3	86	75.264	Bos_taurus
ENSNBRG00000000636	chd3	98	76.016	ENSCJAG00000014766	CHD3	85	75.396	Callithrix_jacchus
ENSNBRG00000000636	chd3	97	75.676	ENSCAFG00000016859	CHD3	85	75.337	Canis_familiaris
ENSNBRG00000000636	chd3	98	76.078	ENSCAFG00020007422	CHD3	93	75.395	Canis_lupus_dingo
ENSNBRG00000000636	chd3	97	75.894	ENSCHIG00000016737	CHD3	86	75.411	Capra_hircus
ENSNBRG00000000636	chd3	98	75.897	ENSTSYG00000035658	CHD3	92	72.998	Carlito_syrichta
ENSNBRG00000000636	chd3	97	72.770	ENSCAPG00000014864	CHD3	84	72.183	Cavia_aperea
ENSNBRG00000000636	chd3	97	75.587	ENSCPOG00000022653	CHD3	85	75.000	Cavia_porcellus
ENSNBRG00000000636	chd3	97	76.758	ENSCCAG00000034792	CHD3	85	75.396	Cebus_capucinus
ENSNBRG00000000636	chd3	98	75.899	ENSCATG00000041717	CHD3	84	76.464	Cercocebus_atys
ENSNBRG00000000636	chd3	98	75.573	ENSCLAG00000010523	CHD3	86	75.653	Chinchilla_lanigera
ENSNBRG00000000636	chd3	97	75.927	ENSCSAG00000011122	CHD3	86	75.574	Chlorocebus_sabaeus
ENSNBRG00000000636	chd3	97	78.928	ENSCPBG00000011966	CHD3	99	77.824	Chrysemys_picta_bellii
ENSNBRG00000000636	chd3	98	75.899	ENSCANG00000037641	CHD3	92	72.945	Colobus_angolensis_palliatus
ENSNBRG00000000636	chd3	98	75.561	ENSCGRG00001011306	Chd3	86	76.088	Cricetulus_griseus_chok1gshd
ENSNBRG00000000636	chd3	87	73.776	ENSCGRG00000007878	Chd3	79	75.261	Cricetulus_griseus_crigri
ENSNBRG00000000636	chd3	98	87.523	ENSCSEG00000004489	chd3	91	87.219	Cynoglossus_semilaevis
ENSNBRG00000000636	chd3	98	84.434	ENSCVAG00000007293	chd3	92	83.412	Cyprinodon_variegatus
ENSNBRG00000000636	chd3	98	82.609	ENSDARG00000021405	chd3	93	81.874	Danio_rerio
ENSNBRG00000000636	chd3	85	76.721	ENSDNOG00000047846	CHD3	77	76.268	Dasypus_novemcinctus
ENSNBRG00000000636	chd3	98	76.081	ENSDORG00000010713	Chd3	86	76.139	Dipodomys_ordii
ENSNBRG00000000636	chd3	97	70.985	ENSETEG00000017733	CHD3	88	70.657	Echinops_telfairi
ENSNBRG00000000636	chd3	64	74.524	ENSEBUG00000008310	chd3	72	74.433	Eptatretus_burgeri
ENSNBRG00000000636	chd3	97	75.704	ENSEASG00005019360	CHD3	93	74.985	Equus_asinus_asinus
ENSNBRG00000000636	chd3	97	75.763	ENSECAG00000010051	CHD3	93	74.985	Equus_caballus
ENSNBRG00000000636	chd3	90	92.784	ENSEEUG00000015205	CHD3	76	92.784	Erinaceus_europaeus
ENSNBRG00000000636	chd3	91	95.333	ENSELUG00000019499	chd3	99	95.333	Esox_lucius
ENSNBRG00000000636	chd3	97	75.720	ENSFCAG00000009629	CHD3	82	75.367	Felis_catus
ENSNBRG00000000636	chd3	98	75.261	ENSFDAG00000008220	CHD3	86	75.308	Fukomys_damarensis
ENSNBRG00000000636	chd3	94	82.212	ENSGMOG00000013599	chd3	80	89.418	Gadus_morhua
ENSNBRG00000000636	chd3	63	88.280	ENSGAFG00000004055	chd3	92	88.280	Gambusia_affinis
ENSNBRG00000000636	chd3	97	79.825	ENSGACG00000019275	chd3	87	78.744	Gasterosteus_aculeatus
ENSNBRG00000000636	chd3	82	79.709	ENSGAGG00000013164	CHD3	95	81.545	Gopherus_agassizii
ENSNBRG00000000636	chd3	98	75.958	ENSGGOG00000013496	CHD3	92	72.396	Gorilla_gorilla
ENSNBRG00000000636	chd3	97	76.250	ENSHGLG00000012017	CHD3	85	75.000	Heterocephalus_glaber_female
ENSNBRG00000000636	chd3	81	71.250	ENSHGLG00100013902	CHD3	83	71.130	Heterocephalus_glaber_male
ENSNBRG00000000636	chd3	97	82.989	ENSHCOG00000010170	chd3	86	82.471	Hippocampus_comes
ENSNBRG00000000636	chd3	97	85.139	ENSIPUG00000003271	chd3	93	85.139	Ictalurus_punctatus
ENSNBRG00000000636	chd3	98	76.286	ENSSTOG00000025907	CHD3	86	76.555	Ictidomys_tridecemlineatus
ENSNBRG00000000636	chd3	98	76.092	ENSJJAG00000017633	Chd3	86	75.713	Jaculus_jaculus
ENSNBRG00000000636	chd3	97	87.002	ENSKMAG00000019292	chd3	88	86.941	Kryptolebias_marmoratus
ENSNBRG00000000636	chd3	98	84.022	ENSLBEG00000028485	chd3	86	83.323	Labrus_bergylta
ENSNBRG00000000636	chd3	89	73.694	ENSLACG00000008031	CHD3	88	71.185	Latimeria_chalumnae
ENSNBRG00000000636	chd3	93	90.476	ENSLOCG00000013965	chd3	80	90.476	Lepisosteus_oculatus
ENSNBRG00000000636	chd3	98	74.781	ENSLAFG00000000572	CHD3	90	74.780	Loxodonta_africana
ENSNBRG00000000636	chd3	98	75.899	ENSMFAG00000020113	CHD3	92	73.604	Macaca_fascicularis
ENSNBRG00000000636	chd3	98	73.504	ENSMMUG00000022221	CHD3	85	74.351	Macaca_mulatta
ENSNBRG00000000636	chd3	98	75.958	ENSMNEG00000001728	CHD3	92	74.838	Macaca_nemestrina
ENSNBRG00000000636	chd3	98	75.899	ENSMLEG00000032249	CHD3	84	76.464	Mandrillus_leucophaeus
ENSNBRG00000000636	chd3	97	88.767	ENSMAMG00000000564	chd3	99	88.767	Mastacembelus_armatus
ENSNBRG00000000636	chd3	97	75.969	ENSMAUG00000013873	Chd3	92	73.595	Mesocricetus_auratus
ENSNBRG00000000636	chd3	97	75.998	ENSMICG00000008741	CHD3	85	72.733	Microcebus_murinus
ENSNBRG00000000636	chd3	98	75.384	ENSMOCG00000004848	Chd3	86	75.981	Microtus_ochrogaster
ENSNBRG00000000636	chd3	98	86.252	ENSMMOG00000012699	chd3	91	84.749	Mola_mola
ENSNBRG00000000636	chd3	97	76.789	ENSMODG00000007509	CHD3	92	76.789	Monodelphis_domestica
ENSNBRG00000000636	chd3	97	76.509	MGP_CAROLIEiJ_G0016564	Chd3	88	75.850	Mus_caroli
ENSNBRG00000000636	chd3	97	76.850	ENSMUSG00000018474	Chd3	88	76.313	Mus_musculus
ENSNBRG00000000636	chd3	97	76.657	MGP_PahariEiJ_G0017695	Chd3	88	76.074	Mus_pahari
ENSNBRG00000000636	chd3	98	76.106	MGP_SPRETEiJ_G0017400	Chd3	88	76.313	Mus_spretus
ENSNBRG00000000636	chd3	88	79.521	ENSMPUG00000008861	CHD3	88	79.189	Mustela_putorius_furo
ENSNBRG00000000636	chd3	97	75.381	ENSMLUG00000014643	-	85	75.117	Myotis_lucifugus
ENSNBRG00000000636	chd3	97	75.718	ENSNGAG00000000773	Chd3	84	75.176	Nannospalax_galili
ENSNBRG00000000636	chd3	98	74.131	ENSNLEG00000009770	CHD3	88	73.656	Nomascus_leucogenys
ENSNBRG00000000636	chd3	82	88.372	ENSMEUG00000005852	CHD3	73	88.372	Notamacropus_eugenii
ENSNBRG00000000636	chd3	98	74.550	ENSOPRG00000011069	CHD3	91	74.677	Ochotona_princeps
ENSNBRG00000000636	chd3	97	75.587	ENSODEG00000017785	CHD3	85	75.117	Octodon_degus
ENSNBRG00000000636	chd3	98	90.687	ENSONIG00000009292	chd3	90	90.570	Oreochromis_niloticus
ENSNBRG00000000636	chd3	95	72.252	ENSOCUG00000029299	CHD3	85	72.169	Oryctolagus_cuniculus
ENSNBRG00000000636	chd3	88	86.505	ENSORLG00000007107	chd3	88	85.493	Oryzias_latipes
ENSNBRG00000000636	chd3	59	88.187	ENSORLG00020008387	chd3	86	89.195	Oryzias_latipes_hni
ENSNBRG00000000636	chd3	97	89.866	ENSOMEG00000013691	chd3	99	89.621	Oryzias_melastigma
ENSNBRG00000000636	chd3	97	76.056	ENSOGAG00000003216	CHD3	86	75.587	Otolemur_garnettii
ENSNBRG00000000636	chd3	97	74.955	ENSOARG00000017855	CHD3	84	74.762	Ovis_aries
ENSNBRG00000000636	chd3	98	74.244	ENSPPAG00000032886	CHD3	92	72.506	Pan_paniscus
ENSNBRG00000000636	chd3	98	76.140	ENSPPRG00000000626	CHD3	85	76.148	Panthera_pardus
ENSNBRG00000000636	chd3	98	76.016	ENSPTRG00000008714	CHD3	92	72.680	Pan_troglodytes
ENSNBRG00000000636	chd3	97	75.807	ENSPANG00000023938	CHD3	92	73.604	Papio_anubis
ENSNBRG00000000636	chd3	93	86.863	ENSPKIG00000006305	chd3	82	92.553	Paramormyrops_kingsleyae
ENSNBRG00000000636	chd3	60	85.185	ENSPSIG00000010177	CHD3	89	84.985	Pelodiscus_sinensis
ENSNBRG00000000636	chd3	97	75.587	ENSPEMG00000014262	Chd3	86	75.528	Peromyscus_maniculatus_bairdii
ENSNBRG00000000636	chd3	96	79.531	ENSPCIG00000005442	CHD3	85	91.892	Phascolarctos_cinereus
ENSNBRG00000000636	chd3	98	87.517	ENSPFOG00000012464	chd3	81	86.644	Poecilia_formosa
ENSNBRG00000000636	chd3	98	82.910	ENSPLAG00000002887	chd3	90	82.857	Poecilia_latipinna
ENSNBRG00000000636	chd3	59	88.139	ENSPMEG00000016725	chd3	83	88.241	Poecilia_mexicana
ENSNBRG00000000636	chd3	98	87.925	ENSPREG00000011044	chd3	87	87.629	Poecilia_reticulata
ENSNBRG00000000636	chd3	97	73.224	ENSPPYG00000007940	CHD3	86	72.754	Pongo_abelii
ENSNBRG00000000636	chd3	92	79.837	ENSPCAG00000004350	CHD3	83	79.673	Procavia_capensis
ENSNBRG00000000636	chd3	97	76.635	ENSPCOG00000020952	CHD3	85	75.543	Propithecus_coquereli
ENSNBRG00000000636	chd3	82	73.838	ENSPVAG00000016344	CHD3	73	73.889	Pteropus_vampyrus
ENSNBRG00000000636	chd3	95	85.907	ENSPNAG00000020393	chd3	94	82.719	Pygocentrus_nattereri
ENSNBRG00000000636	chd3	97	75.646	ENSRNOG00000009722	Chd3	92	75.059	Rattus_norvegicus
ENSNBRG00000000636	chd3	98	73.804	ENSRBIG00000033562	CHD3	87	78.034	Rhinopithecus_bieti
ENSNBRG00000000636	chd3	98	75.899	ENSRROG00000029554	CHD3	92	73.911	Rhinopithecus_roxellana
ENSNBRG00000000636	chd3	98	76.075	ENSSBOG00000020719	CHD3	92	74.956	Saimiri_boliviensis_boliviensis
ENSNBRG00000000636	chd3	97	76.905	ENSSHAG00000014412	CHD3	86	76.545	Sarcophilus_harrisii
ENSNBRG00000000636	chd3	94	83.916	ENSSFOG00015023123	chd3	90	85.567	Scleropages_formosus
ENSNBRG00000000636	chd3	98	89.887	ENSSMAG00000006451	chd3	99	88.221	Scophthalmus_maximus
ENSNBRG00000000636	chd3	58	89.386	ENSSDUG00000005792	chd3	88	89.386	Seriola_dumerili
ENSNBRG00000000636	chd3	97	88.821	ENSSPAG00000013694	chd3	99	88.759	Stegastes_partitus
ENSNBRG00000000636	chd3	97	76.762	ENSSSCG00000021363	CHD3	99	75.660	Sus_scrofa
ENSNBRG00000000636	chd3	83	88.062	ENSTRUG00000014990	chd3	83	89.363	Takifugu_rubripes
ENSNBRG00000000636	chd3	98	85.664	ENSTNIG00000012998	chd3	87	85.401	Tetraodon_nigroviridis
ENSNBRG00000000636	chd3	70	86.408	ENSTBEG00000011454	-	63	92.784	Tupaia_belangeri
ENSNBRG00000000636	chd3	98	77.952	ENSTTRG00000010295	CHD3	81	78.700	Tursiops_truncatus
ENSNBRG00000000636	chd3	97	75.787	ENSUAMG00000005475	CHD3	92	74.007	Ursus_americanus
ENSNBRG00000000636	chd3	56	89.474	ENSVPAG00000010794	-	53	89.474	Vicugna_pacos
ENSNBRG00000000636	chd3	97	76.822	ENSVVUG00000028011	CHD3	89	75.395	Vulpes_vulpes
ENSNBRG00000000636	chd3	98	67.572	ENSXETG00000012991	chd3	83	68.334	Xenopus_tropicalis
ENSNBRG00000000636	chd3	63	85.659	ENSXCOG00000000809	chd3	88	85.756	Xiphophorus_couchianus
ENSNBRG00000000636	chd3	94	90.323	ENSXMAG00000016035	chd3	99	83.498	Xiphophorus_maculatus