EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000708 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 13293 bases
Position: chrJH422284.1:9059274-9072566
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000824	zf-C2H2	PF00096.26	9.5e-40	1	4
ENSNBRP00000000824	zf-C2H2	PF00096.26	9.5e-40	2	4
ENSNBRP00000000824	zf-C2H2	PF00096.26	9.5e-40	3	4
ENSNBRP00000000824	zf-C2H2	PF00096.26	9.5e-40	4	4
ENSNBRP00000000824	zf-met	PF12874.7	2e-07	1	2
ENSNBRP00000000824	zf-met	PF12874.7	2e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000871	-	1287	-	ENSNBRP00000000824	428 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000000708's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000708's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000708	-	88	44.571	ENSNBRG00000024046	-	58	44.340
ENSNBRG00000000708	-	88	46.575	ENSNBRG00000024048	-	82	46.575
ENSNBRG00000000708	-	88	37.870	ENSNBRG00000021237	-	88	37.870
ENSNBRG00000000708	-	95	35.965	ENSNBRG00000009279	-	90	35.333
ENSNBRG00000000708	-	91	39.024	ENSNBRG00000014882	-	58	39.024
ENSNBRG00000000708	-	88	39.080	ENSNBRG00000004723	-	92	39.080
ENSNBRG00000000708	-	88	43.182	ENSNBRG00000010987	-	76	43.182
ENSNBRG00000000708	-	83	43.077	ENSNBRG00000023960	-	64	43.077
ENSNBRG00000000708	-	88	39.362	ENSNBRG00000016582	-	92	39.362
ENSNBRG00000000708	-	94	40.698	ENSNBRG00000022241	-	86	41.880
ENSNBRG00000000708	-	98	35.484	ENSNBRG00000008106	-	94	35.484
ENSNBRG00000000708	-	88	37.634	ENSNBRG00000006411	-	86	37.634
ENSNBRG00000000708	-	87	45.455	ENSNBRG00000016219	-	85	45.455
ENSNBRG00000000708	-	93	37.991	ENSNBRG00000001641	-	86	37.991
ENSNBRG00000000708	-	84	51.471	ENSNBRG00000004381	-	87	51.471
ENSNBRG00000000708	-	87	41.837	ENSNBRG00000013501	-	96	41.837
ENSNBRG00000000708	-	95	44.167	ENSNBRG00000006757	-	94	44.167
ENSNBRG00000000708	-	93	37.383	ENSNBRG00000016550	-	88	37.731
ENSNBRG00000000708	-	92	44.840	ENSNBRG00000024019	-	91	44.915
ENSNBRG00000000708	-	95	41.600	ENSNBRG00000024014	-	76	41.600
ENSNBRG00000000708	-	96	37.192	ENSNBRG00000004523	-	94	37.192
ENSNBRG00000000708	-	87	44.554	ENSNBRG00000013583	-	97	45.946
ENSNBRG00000000708	-	88	42.672	ENSNBRG00000024354	-	94	42.529
ENSNBRG00000000708	-	95	40.779	ENSNBRG00000019481	-	91	40.779
ENSNBRG00000000708	-	87	39.189	ENSNBRG00000024294	-	79	39.189
ENSNBRG00000000708	-	90	33.684	ENSNBRG00000005175	zbtb41	69	33.684
ENSNBRG00000000708	-	89	44.000	ENSNBRG00000009128	-	54	44.000
ENSNBRG00000000708	-	89	44.444	ENSNBRG00000019770	-	90	46.847
ENSNBRG00000000708	-	87	41.667	ENSNBRG00000021960	zbtb17	50	41.667
ENSNBRG00000000708	-	89	35.185	ENSNBRG00000021967	-	67	35.185
ENSNBRG00000000708	-	86	36.957	ENSNBRG00000003394	-	65	36.957
ENSNBRG00000000708	-	87	46.043	ENSNBRG00000023229	-	80	46.043
ENSNBRG00000000708	-	91	44.203	ENSNBRG00000024066	-	87	39.163
ENSNBRG00000000708	-	87	43.902	ENSNBRG00000007276	-	57	43.902
ENSNBRG00000000708	-	93	35.374	ENSNBRG00000012391	gfi1b	70	35.374
ENSNBRG00000000708	-	95	36.431	ENSNBRG00000008123	-	80	35.990
ENSNBRG00000000708	-	87	49.425	ENSNBRG00000013604	-	70	49.425
ENSNBRG00000000708	-	90	42.381	ENSNBRG00000016234	-	69	42.381
ENSNBRG00000000708	-	92	40.657	ENSNBRG00000002902	-	99	42.373
ENSNBRG00000000708	-	91	42.804	ENSNBRG00000001163	-	94	42.157
ENSNBRG00000000708	-	88	45.732	ENSNBRG00000019004	-	66	45.732
ENSNBRG00000000708	-	87	39.113	ENSNBRG00000005849	-	90	40.984
ENSNBRG00000000708	-	87	47.368	ENSNBRG00000016577	si:dkey-182i3.9	90	37.624
ENSNBRG00000000708	-	93	42.308	ENSNBRG00000016282	-	93	48.276
ENSNBRG00000000708	-	98	41.489	ENSNBRG00000008223	-	89	36.100
ENSNBRG00000000708	-	87	54.795	ENSNBRG00000010405	-	83	54.795
ENSNBRG00000000708	-	87	44.966	ENSNBRG00000007384	-	52	44.966
ENSNBRG00000000708	-	86	45.455	ENSNBRG00000023956	-	54	45.455
ENSNBRG00000000708	-	85	37.895	ENSNBRG00000007221	scrt2	52	37.895
ENSNBRG00000000708	-	87	40.711	ENSNBRG00000024179	-	63	40.066
ENSNBRG00000000708	-	90	42.905	ENSNBRG00000004822	-	53	42.905
ENSNBRG00000000708	-	87	34.896	ENSNBRG00000018449	PRDM15	50	30.275
ENSNBRG00000000708	-	87	40.741	ENSNBRG00000024086	-	58	40.741
ENSNBRG00000000708	-	95	35.417	ENSNBRG00000019987	GZF1	52	35.417
ENSNBRG00000000708	-	87	47.727	ENSNBRG00000000577	-	75	47.727
ENSNBRG00000000708	-	84	45.714	ENSNBRG00000003000	-	81	45.714
ENSNBRG00000000708	-	88	39.086	ENSNBRG00000009811	-	85	39.086
ENSNBRG00000000708	-	93	35.535	ENSNBRG00000009815	-	92	35.535
ENSNBRG00000000708	-	91	35.165	ENSNBRG00000012376	-	98	35.165
ENSNBRG00000000708	-	86	42.609	ENSNBRG00000021998	-	55	42.609
ENSNBRG00000000708	-	92	50.000	ENSNBRG00000009307	sall1a	64	50.000
ENSNBRG00000000708	-	87	36.224	ENSNBRG00000004976	prdm5	72	36.224
ENSNBRG00000000708	-	88	44.792	ENSNBRG00000006125	-	93	44.792
ENSNBRG00000000708	-	89	38.043	ENSNBRG00000011785	snai2	70	38.043
ENSNBRG00000000708	-	87	45.144	ENSNBRG00000000523	-	65	45.144
ENSNBRG00000000708	-	89	45.868	ENSNBRG00000007602	-	83	45.868
ENSNBRG00000000708	-	94	35.780	ENSNBRG00000001608	-	95	35.780
ENSNBRG00000000708	-	94	37.668	ENSNBRG00000008827	znf319b	95	37.668
ENSNBRG00000000708	-	89	49.351	ENSNBRG00000004792	-	53	49.351
ENSNBRG00000000708	-	96	40.833	ENSNBRG00000005823	-	84	40.833
ENSNBRG00000000708	-	94	43.750	ENSNBRG00000024051	-	50	43.750
ENSNBRG00000000708	-	84	41.404	ENSNBRG00000024054	-	58	41.304
ENSNBRG00000000708	-	93	42.350	ENSNBRG00000014088	-	97	51.190
ENSNBRG00000000708	-	92	48.529	ENSNBRG00000016666	-	95	53.191
ENSNBRG00000000708	-	84	41.667	ENSNBRG00000001834	-	100	41.667
ENSNBRG00000000708	-	90	35.860	ENSNBRG00000004557	-	95	35.860
ENSNBRG00000000708	-	91	42.735	ENSNBRG00000000321	-	99	39.766
ENSNBRG00000000708	-	95	51.376	ENSNBRG00000000492	-	70	45.596
ENSNBRG00000000708	-	87	43.989	ENSNBRG00000016169	-	67	43.989
ENSNBRG00000000708	-	87	40.373	ENSNBRG00000018718	zbtb47b	80	43.548
ENSNBRG00000000708	-	88	39.103	ENSNBRG00000024293	-	86	39.103
ENSNBRG00000000708	-	95	41.791	ENSNBRG00000021355	-	87	38.739
ENSNBRG00000000708	-	87	49.462	ENSNBRG00000000793	-	99	49.462
ENSNBRG00000000708	-	92	41.053	ENSNBRG00000002542	-	87	41.053
ENSNBRG00000000708	-	97	36.119	ENSNBRG00000016564	-	82	36.119
ENSNBRG00000000708	-	88	40.341	ENSNBRG00000024020	-	55	40.341
ENSNBRG00000000708	-	87	40.580	ENSNBRG00000003250	-	97	37.273
ENSNBRG00000000708	-	85	37.566	ENSNBRG00000015442	ZNF319	88	37.566
ENSNBRG00000000708	-	86	36.893	ENSNBRG00000023091	snai1a	57	36.559
ENSNBRG00000000708	-	94	41.228	ENSNBRG00000015873	-	93	43.939
ENSNBRG00000000708	-	89	50.893	ENSNBRG00000024344	-	73	50.893
ENSNBRG00000000708	-	95	42.949	ENSNBRG00000024345	-	88	42.949
ENSNBRG00000000708	-	89	35.417	ENSNBRG00000013983	scrt1b	63	35.417
ENSNBRG00000000708	-	84	42.105	ENSNBRG00000010351	-	94	42.105
ENSNBRG00000000708	-	89	41.436	ENSNBRG00000002946	-	52	41.436
ENSNBRG00000000708	-	90	47.134	ENSNBRG00000000960	-	97	47.899
ENSNBRG00000000708	-	96	36.842	ENSNBRG00000005796	-	96	36.842
ENSNBRG00000000708	-	94	39.041	ENSNBRG00000009075	znf236	89	39.583
ENSNBRG00000000708	-	96	37.366	ENSNBRG00000005805	-	95	40.351
ENSNBRG00000000708	-	92	46.000	ENSNBRG00000015652	-	87	42.000
ENSNBRG00000000708	-	96	36.129	ENSNBRG00000020159	znf526	86	33.503
ENSNBRG00000000708	-	85	36.842	ENSNBRG00000014403	-	66	36.842
ENSNBRG00000000708	-	95	43.671	ENSNBRG00000003124	-	96	42.202
ENSNBRG00000000708	-	88	41.327	ENSNBRG00000010194	-	67	43.939
ENSNBRG00000000708	-	95	37.398	ENSNBRG00000016603	-	90	37.398
ENSNBRG00000000708	-	92	42.857	ENSNBRG00000000305	-	81	37.879
ENSNBRG00000000708	-	88	43.038	ENSNBRG00000007311	-	80	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000708	-	88	44.958	ENSACAG00000008664	-	66	44.958	Anolis_carolinensis
ENSNBRG00000000708	-	88	38.790	ENSACAG00000024898	-	99	38.790	Anolis_carolinensis
ENSNBRG00000000708	-	87	40.314	ENSACAG00000024956	-	77	40.314	Anolis_carolinensis
ENSNBRG00000000708	-	92	42.730	ENSAMXG00000038636	-	99	41.160	Astyanax_mexicanus
ENSNBRG00000000708	-	88	46.491	ENSAMXG00000042784	-	94	46.491	Astyanax_mexicanus
ENSNBRG00000000708	-	87	43.408	ENSAMXG00000038536	-	83	43.408	Astyanax_mexicanus
ENSNBRG00000000708	-	93	43.567	ENSAMXG00000010805	-	93	42.857	Astyanax_mexicanus
ENSNBRG00000000708	-	94	42.623	ENSAMXG00000035246	-	78	42.623	Astyanax_mexicanus
ENSNBRG00000000708	-	88	45.349	ENSAMXG00000036233	-	82	45.349	Astyanax_mexicanus
ENSNBRG00000000708	-	95	43.269	ENSAMXG00000034847	-	96	43.269	Astyanax_mexicanus
ENSNBRG00000000708	-	87	43.087	ENSAMXG00000042746	-	83	43.087	Astyanax_mexicanus
ENSNBRG00000000708	-	88	44.737	ENSAMXG00000025452	-	97	43.590	Astyanax_mexicanus
ENSNBRG00000000708	-	87	41.401	ENSAMXG00000032841	-	76	41.401	Astyanax_mexicanus
ENSNBRG00000000708	-	88	46.018	ENSAMXG00000034344	-	79	46.018	Astyanax_mexicanus
ENSNBRG00000000708	-	87	42.735	ENSAMXG00000038325	-	90	42.735	Astyanax_mexicanus
ENSNBRG00000000708	-	88	40.807	ENSBTAG00000038322	-	78	40.391	Bos_taurus
ENSNBRG00000000708	-	89	42.123	ENSCPBG00000013652	-	69	42.123	Chrysemys_picta_bellii
ENSNBRG00000000708	-	91	39.912	ENSCPBG00000008580	-	79	39.600	Chrysemys_picta_bellii
ENSNBRG00000000708	-	89	42.786	ENSCPBG00000001526	-	80	43.777	Chrysemys_picta_bellii
ENSNBRG00000000708	-	92	43.151	ENSCSAVG00000010960	-	100	45.178	Ciona_savignyi
ENSNBRG00000000708	-	88	38.721	ENSDNOG00000047495	-	93	39.394	Dasypus_novemcinctus
ENSNBRG00000000708	-	88	38.525	ENSEBUG00000005264	-	77	36.512	Eptatretus_burgeri
ENSNBRG00000000708	-	95	40.181	ENSEBUG00000011694	-	98	40.385	Eptatretus_burgeri
ENSNBRG00000000708	-	93	39.674	ENSEBUG00000002075	-	75	38.507	Eptatretus_burgeri
ENSNBRG00000000708	-	90	40.074	ENSEBUG00000015837	-	79	38.206	Eptatretus_burgeri
ENSNBRG00000000708	-	94	39.946	ENSEBUG00000008306	-	89	39.946	Eptatretus_burgeri
ENSNBRG00000000708	-	89	38.686	ENSEBUG00000013875	-	87	38.686	Eptatretus_burgeri
ENSNBRG00000000708	-	95	40.653	ENSEBUG00000012919	-	81	39.050	Eptatretus_burgeri
ENSNBRG00000000708	-	96	38.507	ENSEBUG00000011435	-	81	38.507	Eptatretus_burgeri
ENSNBRG00000000708	-	87	37.978	ENSEBUG00000014717	-	73	37.978	Eptatretus_burgeri
ENSNBRG00000000708	-	87	39.731	ENSEASG00005004469	-	90	39.731	Equus_asinus_asinus
ENSNBRG00000000708	-	93	35.985	ENSGMOG00000018506	-	100	35.277	Gadus_morhua
ENSNBRG00000000708	-	88	39.542	ENSGALG00000055127	-	62	39.506	Gallus_gallus
ENSNBRG00000000708	-	93	46.281	ENSGALG00000044069	-	60	46.281	Gallus_gallus
ENSNBRG00000000708	-	87	42.174	ENSGALG00000049609	-	56	41.077	Gallus_gallus
ENSNBRG00000000708	-	87	39.535	ENSGALG00000053507	-	76	39.535	Gallus_gallus
ENSNBRG00000000708	-	94	43.929	ENSGALG00000046336	-	98	43.929	Gallus_gallus
ENSNBRG00000000708	-	95	41.732	ENSGALG00000054325	-	98	41.732	Gallus_gallus
ENSNBRG00000000708	-	89	41.722	ENSGACG00000006283	-	94	38.043	Gasterosteus_aculeatus
ENSNBRG00000000708	-	91	41.317	ENSGAGG00000011366	-	92	41.317	Gopherus_agassizii
ENSNBRG00000000708	-	91	40.237	ENSGAGG00000018885	-	66	42.365	Gopherus_agassizii
ENSNBRG00000000708	-	94	45.545	ENSGAGG00000011399	-	86	45.588	Gopherus_agassizii
ENSNBRG00000000708	-	88	72.083	ENSHCOG00000018201	-	83	72.083	Hippocampus_comes
ENSNBRG00000000708	-	87	42.574	ENSIPUG00000021515	-	84	42.234	Ictalurus_punctatus
ENSNBRG00000000708	-	88	44.898	ENSIPUG00000015468	-	89	41.995	Ictalurus_punctatus
ENSNBRG00000000708	-	89	37.267	ENSIPUG00000012109	ZN12	51	37.267	Ictalurus_punctatus
ENSNBRG00000000708	-	88	37.847	ENSJJAG00000023633	Zfp672	94	36.700	Jaculus_jaculus
ENSNBRG00000000708	-	90	37.615	ENSLACG00000005264	-	98	37.615	Latimeria_chalumnae
ENSNBRG00000000708	-	91	38.983	ENSLACG00000009005	-	100	41.379	Latimeria_chalumnae
ENSNBRG00000000708	-	88	40.401	ENSLACG00000022211	-	76	40.401	Latimeria_chalumnae
ENSNBRG00000000708	-	87	38.644	ENSLOCG00000017864	-	100	38.644	Lepisosteus_oculatus
ENSNBRG00000000708	-	87	42.244	ENSMGAG00000013362	-	100	42.244	Meleagris_gallopavo
ENSNBRG00000000708	-	91	37.624	ENSMAUG00000009945	Zfp672	89	37.624	Mesocricetus_auratus
ENSNBRG00000000708	-	88	45.033	ENSMMOG00000003923	-	87	45.033	Mola_mola
ENSNBRG00000000708	-	88	35.562	ENSMODG00000014052	-	100	35.562	Monodelphis_domestica
ENSNBRG00000000708	-	90	39.633	ENSMODG00000010532	-	85	39.633	Monodelphis_domestica
ENSNBRG00000000708	-	92	38.567	ENSMODG00000001880	-	79	38.567	Monodelphis_domestica
ENSNBRG00000000708	-	87	37.569	MGP_CAROLIEiJ_G0016391	Zfp672	99	38.095	Mus_caroli
ENSNBRG00000000708	-	89	41.200	MGP_CAROLIEiJ_G0030502	-	71	41.200	Mus_caroli
ENSNBRG00000000708	-	83	40.176	ENSMUSG00000030823	9130019O22Rik	67	39.617	Mus_musculus
ENSNBRG00000000708	-	88	43.062	ENSMUSG00000049755	Zfp672	99	36.905	Mus_musculus
ENSNBRG00000000708	-	90	42.000	MGP_SPRETEiJ_G0031613	-	87	42.000	Mus_spretus
ENSNBRG00000000708	-	88	43.062	MGP_SPRETEiJ_G0017233	Zfp672	99	35.714	Mus_spretus
ENSNBRG00000000708	-	92	40.104	ENSNGAG00000015777	Zim1	58	35.671	Nannospalax_galili
ENSNBRG00000000708	-	87	43.182	ENSORLG00020001922	-	89	42.466	Oryzias_latipes_hni
ENSNBRG00000000708	-	87	42.857	ENSOMEG00000001598	-	73	42.857	Oryzias_melastigma
ENSNBRG00000000708	-	86	43.607	ENSPSIG00000004502	-	59	43.607	Pelodiscus_sinensis
ENSNBRG00000000708	-	90	38.342	ENSPSIG00000006586	-	99	38.342	Pelodiscus_sinensis
ENSNBRG00000000708	-	90	41.319	ENSPSIG00000010328	-	66	39.145	Pelodiscus_sinensis
ENSNBRG00000000708	-	88	46.687	ENSPSIG00000010248	-	67	44.947	Pelodiscus_sinensis
ENSNBRG00000000708	-	89	44.290	ENSPSIG00000015459	-	73	41.732	Pelodiscus_sinensis
ENSNBRG00000000708	-	88	43.777	ENSPSIG00000000672	-	85	43.777	Pelodiscus_sinensis
ENSNBRG00000000708	-	87	45.045	ENSPSIG00000005672	-	76	45.045	Pelodiscus_sinensis
ENSNBRG00000000708	-	87	41.370	ENSPSIG00000012650	-	71	41.370	Pelodiscus_sinensis
ENSNBRG00000000708	-	90	41.582	ENSPSIG00000016380	-	71	41.582	Pelodiscus_sinensis
ENSNBRG00000000708	-	88	40.968	ENSPSIG00000003152	-	81	41.484	Pelodiscus_sinensis
ENSNBRG00000000708	-	95	42.448	ENSPSIG00000005603	-	71	41.392	Pelodiscus_sinensis
ENSNBRG00000000708	-	88	47.123	ENSPSIG00000013021	-	85	47.123	Pelodiscus_sinensis
ENSNBRG00000000708	-	86	52.128	ENSPSIG00000006790	-	91	52.128	Pelodiscus_sinensis
ENSNBRG00000000708	-	88	39.766	ENSPREG00000002642	-	96	39.766	Poecilia_reticulata
ENSNBRG00000000708	-	89	43.200	ENSPNYG00000015486	-	61	43.200	Pundamilia_nyererei
ENSNBRG00000000708	-	78	39.834	ENSPNAG00000018395	-	58	39.834	Pygocentrus_nattereri
ENSNBRG00000000708	-	88	43.617	ENSPNAG00000000088	-	95	43.617	Pygocentrus_nattereri
ENSNBRG00000000708	-	88	37.741	ENSRNOG00000002713	Zfp672	90	38.211	Rattus_norvegicus
ENSNBRG00000000708	-	95	38.356	ENSSHAG00000018106	-	75	36.269	Sarcophilus_harrisii
ENSNBRG00000000708	-	93	43.455	ENSSFOG00015019818	-	75	39.921	Scleropages_formosus
ENSNBRG00000000708	-	95	36.176	ENSSMAG00000004252	-	87	36.176	Scophthalmus_maximus
ENSNBRG00000000708	-	97	44.023	ENSSPUG00000010016	-	90	44.023	Sphenodon_punctatus
ENSNBRG00000000708	-	89	45.223	ENSSPUG00000004366	-	58	44.915	Sphenodon_punctatus
ENSNBRG00000000708	-	84	45.946	ENSSPAG00000021653	-	91	45.946	Stegastes_partitus
ENSNBRG00000000708	-	88	45.504	ENSTGUG00000015210	-	100	45.504	Taeniopygia_guttata
ENSNBRG00000000708	-	88	47.273	ENSTGUG00000018351	-	100	45.455	Taeniopygia_guttata
ENSNBRG00000000708	-	95	35.278	ENSTRUG00000022066	-	95	37.615	Takifugu_rubripes
ENSNBRG00000000708	-	87	39.259	ENSXETG00000031192	-	100	40.318	Xenopus_tropicalis
ENSNBRG00000000708	-	87	42.723	ENSXCOG00000006553	-	84	42.723	Xiphophorus_couchianus
ENSNBRG00000000708	-	96	44.094	ENSXMAG00000026680	-	92	44.094	Xiphophorus_maculatus