EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000751 (Gene tree)
Gene ID: 102780921
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9713 bases
Position: chrJH422377.1:36397-46109
Accession: 102780921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000967	RRM_1	PF00076.22	1.3e-30	1	2
ENSNBRP00000000967	RRM_1	PF00076.22	1.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001017	-	963	XM_006803544	ENSNBRP00000000967	320 (aa)	XP_006803607	-

Gene Model

Click here to download ENSNBRG00000000751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000751's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000751	trnau1apb	56	30.769	ENSNBRG00000010172	-	63	30.769
ENSNBRG00000000751	trnau1apb	97	39.683	ENSNBRG00000001758	trnau1apa	94	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000751	trnau1apb	99	75.000	ENSAPOG00000010086	trnau1apb	97	75.529	Acanthochromis_polyacanthus
ENSNBRG00000000751	trnau1apb	98	93.987	ENSACIG00000001863	trnau1apb	97	93.987	Amphilophus_citrinellus
ENSNBRG00000000751	trnau1apb	99	84.384	ENSAOCG00000011891	trnau1apb	97	85.586	Amphiprion_ocellaris
ENSNBRG00000000751	trnau1apb	99	82.675	ENSAPEG00000008029	trnau1apb	97	86.626	Amphiprion_percula
ENSNBRG00000000751	trnau1apb	99	81.737	ENSATEG00000002196	trnau1apb	97	83.784	Anabas_testudineus
ENSNBRG00000000751	trnau1apb	99	97.476	ENSACLG00000003016	trnau1apb	97	97.476	Astatotilapia_calliptera
ENSNBRG00000000751	trnau1apb	99	65.517	ENSAMXG00000001805	trnau1apb	97	67.398	Astyanax_mexicanus
ENSNBRG00000000751	trnau1apb	99	80.480	ENSCSEG00000018215	trnau1apb	97	81.682	Cynoglossus_semilaevis
ENSNBRG00000000751	trnau1apb	94	73.065	ENSCVAG00000017866	trnau1apb	97	74.613	Cyprinodon_variegatus
ENSNBRG00000000751	trnau1apb	99	65.831	ENSDARG00000056475	trnau1apb	97	67.712	Danio_rerio
ENSNBRG00000000751	trnau1apb	99	63.043	ENSELUG00000016683	trnau1apb	97	66.770	Esox_lucius
ENSNBRG00000000751	trnau1apb	99	78.529	ENSFHEG00000001267	trnau1apb	97	79.056	Fundulus_heteroclitus
ENSNBRG00000000751	trnau1apb	99	72.508	ENSGMOG00000001160	trnau1apb	98	73.414	Gadus_morhua
ENSNBRG00000000751	trnau1apb	55	94.350	ENSGAFG00000006770	trnau1apb	97	74.684	Gambusia_affinis
ENSNBRG00000000751	trnau1apb	99	79.385	ENSGACG00000014944	trnau1apb	97	79.938	Gasterosteus_aculeatus
ENSNBRG00000000751	trnau1apb	69	40.807	ENSGAGG00000022384	-	75	40.807	Gopherus_agassizii
ENSNBRG00000000751	trnau1apb	99	89.759	ENSHBUG00000018944	trnau1apb	97	89.759	Haplochromis_burtoni
ENSNBRG00000000751	trnau1apb	72	82.969	ENSHCOG00000011350	trnau1apb	75	81.702	Hippocampus_comes
ENSNBRG00000000751	trnau1apb	98	63.438	ENSIPUG00000008843	tsp1l	98	67.391	Ictalurus_punctatus
ENSNBRG00000000751	trnau1apb	69	90.991	ENSKMAG00000010082	trnau1apb	97	81.493	Kryptolebias_marmoratus
ENSNBRG00000000751	trnau1apb	99	80.909	ENSLBEG00000020480	trnau1apb	97	82.675	Labrus_bergylta
ENSNBRG00000000751	trnau1apb	99	56.386	ENSLOCG00000013175	trnau1apb	96	56.075	Lepisosteus_oculatus
ENSNBRG00000000751	trnau1apb	99	84.084	ENSMAMG00000012192	trnau1apb	97	85.498	Mastacembelus_armatus
ENSNBRG00000000751	trnau1apb	99	89.759	ENSMZEG00005014852	trnau1apb	97	89.759	Maylandia_zebra
ENSNBRG00000000751	trnau1apb	69	38.667	ENSMGAG00000003234	-	95	40.359	Meleagris_gallopavo
ENSNBRG00000000751	trnau1apb	98	70.605	ENSMMOG00000021521	trnau1apb	100	72.174	Mola_mola
ENSNBRG00000000751	trnau1apb	55	98.305	ENSMALG00000003772	trnau1apb	97	77.215	Monopterus_albus
ENSNBRG00000000751	trnau1apb	98	84.665	ENSONIG00000016639	trnau1apb	97	83.387	Oreochromis_niloticus
ENSNBRG00000000751	trnau1apb	70	89.286	ENSORLG00000013265	trnau1apb	97	78.171	Oryzias_latipes
ENSNBRG00000000751	trnau1apb	99	75.371	ENSORLG00020004464	trnau1apb	97	78.635	Oryzias_latipes_hni
ENSNBRG00000000751	trnau1apb	99	75.224	ENSORLG00015021098	trnau1apb	97	78.507	Oryzias_latipes_hsok
ENSNBRG00000000751	trnau1apb	70	88.839	ENSOMEG00000016531	trnau1apb	97	79.525	Oryzias_melastigma
ENSNBRG00000000751	trnau1apb	99	59.385	ENSPKIG00000007995	trnau1apb	97	59.940	Paramormyrops_kingsleyae
ENSNBRG00000000751	trnau1apb	69	42.152	ENSPSIG00000004189	-	75	42.152	Pelodiscus_sinensis
ENSNBRG00000000751	trnau1apb	99	65.964	ENSPMGG00000018509	trnau1apb	97	65.964	Periophthalmus_magnuspinnatus
ENSNBRG00000000751	trnau1apb	99	81.388	ENSPFOG00000003938	trnau1apb	97	81.388	Poecilia_formosa
ENSNBRG00000000751	trnau1apb	99	77.286	ENSPLAG00000015480	trnau1apb	97	77.581	Poecilia_latipinna
ENSNBRG00000000751	trnau1apb	99	77.286	ENSPMEG00000012743	trnau1apb	97	77.581	Poecilia_mexicana
ENSNBRG00000000751	trnau1apb	99	75.516	ENSPREG00000015035	trnau1apb	97	76.696	Poecilia_reticulata
ENSNBRG00000000751	trnau1apb	99	94.637	ENSPNYG00000012127	trnau1apb	97	94.637	Pundamilia_nyererei
ENSNBRG00000000751	trnau1apb	99	62.006	ENSPNAG00000019138	trnau1apb	97	66.871	Pygocentrus_nattereri
ENSNBRG00000000751	trnau1apb	99	59.692	ENSSFOG00015014158	trnau1apb	97	63.526	Scleropages_formosus
ENSNBRG00000000751	trnau1apb	99	79.518	ENSSMAG00000001745	trnau1apb	98	81.571	Scophthalmus_maximus
ENSNBRG00000000751	trnau1apb	99	82.335	ENSSDUG00000011109	trnau1apb	97	84.985	Seriola_dumerili
ENSNBRG00000000751	trnau1apb	99	82.036	ENSSLDG00000012947	trnau1apb	97	84.685	Seriola_lalandi_dorsalis
ENSNBRG00000000751	trnau1apb	68	32.661	ENSSPUG00000016701	-	80	34.413	Sphenodon_punctatus
ENSNBRG00000000751	trnau1apb	99	87.188	ENSSPAG00000006917	trnau1apb	97	87.539	Stegastes_partitus
ENSNBRG00000000751	trnau1apb	99	76.647	ENSTRUG00000008608	trnau1apb	97	77.844	Takifugu_rubripes
ENSNBRG00000000751	trnau1apb	98	72.611	ENSTNIG00000000916	trnau1apb	97	70.755	Tetraodon_nigroviridis
ENSNBRG00000000751	trnau1apb	93	68.652	ENSXCOG00000007974	trnau1apb	91	69.592	Xiphophorus_couchianus
ENSNBRG00000000751	trnau1apb	99	77.286	ENSXMAG00000029918	trnau1apb	97	78.171	Xiphophorus_maculatus