EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000771 (Gene tree)
Gene ID: 102780532
Gene Symbol: srsf5a
Alias: fb49e01|im:6906390|sfrs5|sfrs5a|wu:fb49e01|wu:fj09b12
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6019 bases
Position: chrJH422330.1:165466-171484
Accession: 102780532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000893	RRM_1	PF00076.22	3e-33	1	2
ENSNBRP00000000893	RRM_1	PF00076.22	3e-33	2	2
ENSNBRP00000000893	RRM_3	PF08777.11	1.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000000943	-	2141	XM_006798576	ENSNBRP00000000893	294 (aa)	XP_006798639	UPI00025FC840

Gene Model

Click here to download ENSNBRG00000000771's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000771's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000771	srsf5a	61	41.622	ENSNBRG00000003888	srsf9	68	42.703
ENSNBRG00000000771	srsf5a	90	59.353	ENSNBRG00000001285	srsf5b	63	71.277
ENSNBRG00000000771	srsf5a	72	36.937	ENSNBRG00000008134	-	76	37.788
ENSNBRG00000000771	srsf5a	63	63.441	ENSNBRG00000001846	-	50	63.784
ENSNBRG00000000771	srsf5a	60	37.017	ENSNBRG00000008041	srsf1b	66	36.464
ENSNBRG00000000771	srsf5a	60	41.758	ENSNBRG00000019981	-	66	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000771	srsf5a	100	88.372	ENSAPOG00000017395	srsf5a	78	92.827	Acanthochromis_polyacanthus
ENSNBRG00000000771	srsf5a	81	92.017	ENSACIG00000011892	srsf5a	96	95.588	Amphilophus_citrinellus
ENSNBRG00000000771	srsf5a	81	87.552	ENSAOCG00000014967	srsf5a	80	91.286	Amphiprion_ocellaris
ENSNBRG00000000771	srsf5a	81	87.552	ENSAPEG00000009297	srsf5a	80	91.286	Amphiprion_percula
ENSNBRG00000000771	srsf5a	91	92.135	ENSATEG00000000198	srsf5a	82	94.515	Anabas_testudineus
ENSNBRG00000000771	srsf5a	64	74.346	ENSAPLG00000002469	-	70	73.298	Anas_platyrhynchos
ENSNBRG00000000771	srsf5a	64	75.661	ENSACAG00000029015	-	68	74.211	Anolis_carolinensis
ENSNBRG00000000771	srsf5a	100	99.324	ENSACLG00000027166	srsf5a	100	99.324	Astatotilapia_calliptera
ENSNBRG00000000771	srsf5a	64	85.128	ENSAMXG00000030476	srsf5a	67	84.127	Astyanax_mexicanus
ENSNBRG00000000771	srsf5a	64	77.368	ENSCPBG00000021518	-	70	76.316	Chrysemys_picta_bellii
ENSNBRG00000000771	srsf5a	64	57.653	ENSCSAVG00000011376	-	78	57.653	Ciona_savignyi
ENSNBRG00000000771	srsf5a	81	93.004	ENSCSEG00000008109	srsf5a	77	92.946	Cynoglossus_semilaevis
ENSNBRG00000000771	srsf5a	80	83.951	ENSCVAG00000016982	srsf5a	96	83.459	Cyprinodon_variegatus
ENSNBRG00000000771	srsf5a	84	71.984	ENSDARG00000029818	srsf5a	100	81.159	Danio_rerio
ENSNBRG00000000771	srsf5a	64	76.355	ENSELUG00000020439	srsf5a	62	81.538	Esox_lucius
ENSNBRG00000000771	srsf5a	64	74.074	ENSFALG00000005098	-	64	73.545	Ficedula_albicollis
ENSNBRG00000000771	srsf5a	82	81.395	ENSFHEG00000003955	srsf5a	97	79.310	Fundulus_heteroclitus
ENSNBRG00000000771	srsf5a	64	85.185	ENSGMOG00000000869	srsf5a	94	85.185	Gadus_morhua
ENSNBRG00000000771	srsf5a	64	73.545	ENSGALG00000033259	SRSF5A	63	72.487	Gallus_gallus
ENSNBRG00000000771	srsf5a	82	72.691	ENSGAFG00000018237	srsf5a	78	61.776	Gambusia_affinis
ENSNBRG00000000771	srsf5a	64	77.368	ENSGAGG00000007312	-	70	76.316	Gopherus_agassizii
ENSNBRG00000000771	srsf5a	100	99.322	ENSHBUG00000014048	srsf5a	100	99.322	Haplochromis_burtoni
ENSNBRG00000000771	srsf5a	64	88.889	ENSHCOG00000017557	srsf5a	62	88.360	Hippocampus_comes
ENSNBRG00000000771	srsf5a	64	86.842	ENSIPUG00000003439	srsf5a	69	86.842	Ictalurus_punctatus
ENSNBRG00000000771	srsf5a	86	77.736	ENSKMAG00000014937	srsf5a	71	82.845	Kryptolebias_marmoratus
ENSNBRG00000000771	srsf5a	64	91.795	ENSLBEG00000017153	srsf5a	74	92.308	Labrus_bergylta
ENSNBRG00000000771	srsf5a	64	81.481	ENSLACG00000017874	-	70	79.894	Latimeria_chalumnae
ENSNBRG00000000771	srsf5a	64	82.051	ENSLOCG00000014075	srsf5a	61	83.598	Lepisosteus_oculatus
ENSNBRG00000000771	srsf5a	100	87.075	ENSMAMG00000000192	srsf5a	82	87.764	Mastacembelus_armatus
ENSNBRG00000000771	srsf5a	100	99.661	ENSMZEG00005010485	srsf5a	100	99.661	Maylandia_zebra
ENSNBRG00000000771	srsf5a	73	71.296	ENSMGAG00000011888	-	96	72.515	Meleagris_gallopavo
ENSNBRG00000000771	srsf5a	100	88.119	ENSMMOG00000009793	srsf5a	78	91.561	Mola_mola
ENSNBRG00000000771	srsf5a	100	81.293	ENSMALG00000021194	srsf5a	79	81.013	Monopterus_albus
ENSNBRG00000000771	srsf5a	100	100.000	ENSONIG00000019583	srsf5a	100	100.000	Oreochromis_niloticus
ENSNBRG00000000771	srsf5a	80	86.920	ENSORLG00000009268	srsf5a	83	85.232	Oryzias_latipes
ENSNBRG00000000771	srsf5a	80	86.920	ENSORLG00020003281	srsf5	83	85.232	Oryzias_latipes_hni
ENSNBRG00000000771	srsf5a	80	86.920	ENSORLG00015023075	srsf5	83	85.232	Oryzias_latipes_hsok
ENSNBRG00000000771	srsf5a	80	86.017	ENSOMEG00000000628	srsf5a	83	85.232	Oryzias_melastigma
ENSNBRG00000000771	srsf5a	64	82.653	ENSPKIG00000002054	srsf5a	68	84.127	Paramormyrops_kingsleyae
ENSNBRG00000000771	srsf5a	64	76.842	ENSPSIG00000008238	-	69	73.684	Pelodiscus_sinensis
ENSNBRG00000000771	srsf5a	82	66.932	ENSPMGG00000020125	srsf5a	55	80.423	Periophthalmus_magnuspinnatus
ENSNBRG00000000771	srsf5a	82	82.745	ENSPFOG00000022993	srsf5a	78	82.329	Poecilia_formosa
ENSNBRG00000000771	srsf5a	82	82.677	ENSPLAG00000005508	srsf5a	77	82.258	Poecilia_latipinna
ENSNBRG00000000771	srsf5a	82	83.137	ENSPMEG00000016339	srsf5a	78	82.731	Poecilia_mexicana
ENSNBRG00000000771	srsf5a	82	82.812	ENSPREG00000018091	srsf5a	79	82.400	Poecilia_reticulata
ENSNBRG00000000771	srsf5a	100	99.661	ENSPNYG00000021245	srsf5a	100	99.661	Pundamilia_nyererei
ENSNBRG00000000771	srsf5a	94	63.481	ENSPNAG00000021333	srsf5a	66	84.127	Pygocentrus_nattereri
ENSNBRG00000000771	srsf5a	64	82.143	ENSSFOG00015008377	srsf5	66	84.656	Scleropages_formosus
ENSNBRG00000000771	srsf5a	100	82.258	ENSSMAG00000010899	srsf5a	83	87.747	Scophthalmus_maximus
ENSNBRG00000000771	srsf5a	91	88.476	ENSSDUG00000006103	srsf5a	80	91.561	Seriola_dumerili
ENSNBRG00000000771	srsf5a	100	88.552	ENSSLDG00000004146	srsf5a	79	91.983	Seriola_lalandi_dorsalis
ENSNBRG00000000771	srsf5a	64	73.158	ENSSPUG00000002052	-	68	72.105	Sphenodon_punctatus
ENSNBRG00000000771	srsf5a	81	91.561	ENSSPAG00000002821	srsf5a	80	91.983	Stegastes_partitus
ENSNBRG00000000771	srsf5a	64	74.603	ENSTGUG00000011492	-	68	71.958	Taeniopygia_guttata
ENSNBRG00000000771	srsf5a	100	90.909	ENSTRUG00000022908	srsf5a	81	92.500	Takifugu_rubripes
ENSNBRG00000000771	srsf5a	99	62.290	ENSXETG00000017937	srsf5a	72	79.474	Xenopus_tropicalis
ENSNBRG00000000771	srsf5a	82	82.072	ENSXCOG00000015338	srsf5a	78	82.857	Xiphophorus_couchianus
ENSNBRG00000000771	srsf5a	82	83.137	ENSXMAG00000012823	srsf5a	61	88.083	Xiphophorus_maculatus