EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000000828 (Gene tree)
Gene ID: 102786442
Gene Symbol: upf3a
Alias: -
Full Name: regulator of nonsense transcripts 3A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4101 bases
Position: chrJH422286.1:804116-808216
Accession: 102786442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000000983	Smg4_UPF3	PF03467.15	4e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001034	-	1392	XM_006788147	ENSNBRP00000000983	463 (aa)	XP_006788210	UPI0003EBD4F8

Gene Model

Click here to download ENSNBRG00000000828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000828	upf3a	88	56.813	ENSG00000169062	UPF3A	95	55.361	Homo_sapiens
ENSNBRG00000000828	upf3a	100	96.328	ENSAPOG00000013484	upf3a	100	96.328	Acanthochromis_polyacanthus
ENSNBRG00000000828	upf3a	98	93.277	ENSACIG00000020468	upf3a	99	93.277	Amphilophus_citrinellus
ENSNBRG00000000828	upf3a	100	96.760	ENSAOCG00000020784	upf3a	100	96.760	Amphiprion_ocellaris
ENSNBRG00000000828	upf3a	60	62.034	ENSAOCG00000000706	upf3b	93	50.345	Amphiprion_ocellaris
ENSNBRG00000000828	upf3a	100	96.760	ENSAPEG00000003519	upf3a	100	96.760	Amphiprion_percula
ENSNBRG00000000828	upf3a	100	94.384	ENSATEG00000005843	upf3a	100	94.384	Anabas_testudineus
ENSNBRG00000000828	upf3a	82	66.835	ENSACAG00000001540	UPF3A	99	64.354	Anolis_carolinensis
ENSNBRG00000000828	upf3a	92	52.778	ENSANAG00000021713	UPF3A	99	52.500	Aotus_nancymaae
ENSNBRG00000000828	upf3a	83	45.301	ENSANAG00000025598	-	72	66.667	Aotus_nancymaae
ENSNBRG00000000828	upf3a	100	95.842	ENSACLG00000026274	upf3a	100	95.842	Astatotilapia_calliptera
ENSNBRG00000000828	upf3a	98	83.260	ENSAMXG00000002608	upf3a	99	83.077	Astyanax_mexicanus
ENSNBRG00000000828	upf3a	93	54.585	ENSCJAG00000019102	UPF3A	95	54.803	Callithrix_jacchus
ENSNBRG00000000828	upf3a	82	51.095	ENSCJAG00000004975	UPF3B	77	69.697	Callithrix_jacchus
ENSNBRG00000000828	upf3a	84	45.783	ENSCAFG00020004074	UPF3B	69	66.279	Canis_lupus_dingo
ENSNBRG00000000828	upf3a	83	56.566	ENSCHIG00000008682	UPF3A	85	54.503	Capra_hircus
ENSNBRG00000000828	upf3a	75	54.424	ENSTSYG00000001918	UPF3A	99	54.400	Carlito_syrichta
ENSNBRG00000000828	upf3a	82	51.699	ENSTSYG00000014690	UPF3B	76	65.294	Carlito_syrichta
ENSNBRG00000000828	upf3a	95	53.975	ENSCCAG00000018406	UPF3A	99	54.184	Cebus_capucinus
ENSNBRG00000000828	upf3a	81	39.740	ENSCCAG00000029813	-	52	60.127	Cebus_capucinus
ENSNBRG00000000828	upf3a	93	56.473	ENSCATG00000029733	UPF3A	95	56.696	Cercocebus_atys
ENSNBRG00000000828	upf3a	93	56.087	ENSCSAG00000017388	UPF3A	95	56.739	Chlorocebus_sabaeus
ENSNBRG00000000828	upf3a	81	59.211	ENSCGRG00001017387	Upf3a	89	57.632	Cricetulus_griseus_chok1gshd
ENSNBRG00000000828	upf3a	81	59.211	ENSCGRG00000001468	Upf3a	89	57.632	Cricetulus_griseus_crigri
ENSNBRG00000000828	upf3a	99	90.260	ENSCSEG00000005106	upf3a	99	90.260	Cynoglossus_semilaevis
ENSNBRG00000000828	upf3a	100	88.362	ENSCVAG00000022333	upf3a	100	88.362	Cyprinodon_variegatus
ENSNBRG00000000828	upf3a	98	81.538	ENSDARG00000069297	upf3a	99	81.360	Danio_rerio
ENSNBRG00000000828	upf3a	84	59.854	ENSDNOG00000034391	UPF3A	93	59.854	Dasypus_novemcinctus
ENSNBRG00000000828	upf3a	92	52.586	ENSETEG00000010110	UPF3A	96	52.586	Echinops_telfairi
ENSNBRG00000000828	upf3a	82	48.267	ENSEASG00005012919	UPF3B	62	69.565	Equus_asinus_asinus
ENSNBRG00000000828	upf3a	90	56.541	ENSEASG00005021884	UPF3A	93	55.756	Equus_asinus_asinus
ENSNBRG00000000828	upf3a	82	48.267	ENSECAG00000016947	UPF3B	62	62.857	Equus_caballus
ENSNBRG00000000828	upf3a	98	83.948	ENSELUG00000011050	upf3a	99	83.766	Esox_lucius
ENSNBRG00000000828	upf3a	90	57.658	ENSFCAG00000014602	UPF3A	92	57.658	Felis_catus
ENSNBRG00000000828	upf3a	100	89.440	ENSGAFG00000021170	upf3a	100	89.440	Gambusia_affinis
ENSNBRG00000000828	upf3a	69	84.062	ENSGACG00000001972	upf3a	100	84.062	Gasterosteus_aculeatus
ENSNBRG00000000828	upf3a	51	67.480	ENSGACG00000017435	upf3b	60	71.341	Gasterosteus_aculeatus
ENSNBRG00000000828	upf3a	88	57.311	ENSGGOG00000015428	UPF3A	91	57.044	Gorilla_gorilla
ENSNBRG00000000828	upf3a	80	48.936	ENSGGOG00000041219	-	85	47.273	Gorilla_gorilla
ENSNBRG00000000828	upf3a	89	46.172	ENSGGOG00000043074	-	86	45.985	Gorilla_gorilla
ENSNBRG00000000828	upf3a	100	99.352	ENSHBUG00000011325	upf3a	100	99.352	Haplochromis_burtoni
ENSNBRG00000000828	upf3a	76	56.749	ENSHGLG00000001544	UPF3A	50	66.825	Heterocephalus_glaber_female
ENSNBRG00000000828	upf3a	76	56.749	ENSHGLG00100013244	UPF3A	50	66.825	Heterocephalus_glaber_male
ENSNBRG00000000828	upf3a	94	81.136	ENSHCOG00000013985	upf3a	94	81.591	Hippocampus_comes
ENSNBRG00000000828	upf3a	98	80.879	ENSIPUG00000023450	upf3a	99	80.702	Ictalurus_punctatus
ENSNBRG00000000828	upf3a	100	93.534	ENSKMAG00000004381	upf3a	100	93.534	Kryptolebias_marmoratus
ENSNBRG00000000828	upf3a	98	88.352	ENSLBEG00000021570	upf3a	100	88.403	Labrus_bergylta
ENSNBRG00000000828	upf3a	60	43.109	ENSLACG00000006645	UPF3A	66	87.500	Latimeria_chalumnae
ENSNBRG00000000828	upf3a	97	76.368	ENSLOCG00000002665	upf3a	98	76.368	Lepisosteus_oculatus
ENSNBRG00000000828	upf3a	93	55.605	ENSMFAG00000045016	UPF3A	95	55.381	Macaca_fascicularis
ENSNBRG00000000828	upf3a	87	58.293	ENSMMUG00000007449	UPF3A	95	56.948	Macaca_mulatta
ENSNBRG00000000828	upf3a	85	59.500	ENSMNEG00000036402	UPF3A	83	59.500	Macaca_nemestrina
ENSNBRG00000000828	upf3a	85	59.000	ENSMLEG00000014726	UPF3A	94	59.000	Mandrillus_leucophaeus
ENSNBRG00000000828	upf3a	100	92.067	ENSMAMG00000018364	upf3a	100	92.067	Mastacembelus_armatus
ENSNBRG00000000828	upf3a	100	95.842	ENSMZEG00005021571	upf3a	100	95.842	Maylandia_zebra
ENSNBRG00000000828	upf3a	85	64.059	ENSMGAG00000014837	UPF3A	99	64.059	Meleagris_gallopavo
ENSNBRG00000000828	upf3a	58	67.870	ENSMOCG00000000550	Upf3a	57	69.802	Microtus_ochrogaster
ENSNBRG00000000828	upf3a	100	88.750	ENSMMOG00000019751	upf3a	100	88.750	Mola_mola
ENSNBRG00000000828	upf3a	83	66.917	ENSMODG00000003159	UPF3A	98	65.485	Monodelphis_domestica
ENSNBRG00000000828	upf3a	81	61.097	MGP_PahariEiJ_G0021311	Upf3a	87	59.574	Mus_pahari
ENSNBRG00000000828	upf3a	91	55.459	ENSMPUG00000009139	UPF3A	94	55.459	Mustela_putorius_furo
ENSNBRG00000000828	upf3a	80	60.358	ENSMLUG00000015905	UPF3A	92	60.358	Myotis_lucifugus
ENSNBRG00000000828	upf3a	88	56.941	ENSNLEG00000007563	UPF3A	91	57.373	Nomascus_leucogenys
ENSNBRG00000000828	upf3a	100	98.283	ENSONIG00000006817	upf3a	100	98.283	Oreochromis_niloticus
ENSNBRG00000000828	upf3a	76	56.793	ENSOANG00000006985	-	95	57.337	Ornithorhynchus_anatinus
ENSNBRG00000000828	upf3a	100	86.510	ENSORLG00000010911	upf3a	100	86.510	Oryzias_latipes
ENSNBRG00000000828	upf3a	82	43.204	ENSORLG00020003758	upf3b	51	69.595	Oryzias_latipes_hni
ENSNBRG00000000828	upf3a	100	85.745	ENSORLG00020014317	upf3a	100	85.745	Oryzias_latipes_hni
ENSNBRG00000000828	upf3a	100	86.609	ENSORLG00015017339	upf3a	58	86.609	Oryzias_latipes_hsok
ENSNBRG00000000828	upf3a	100	88.769	ENSOMEG00000014425	upf3a	100	88.769	Oryzias_melastigma
ENSNBRG00000000828	upf3a	73	61.143	ENSOGAG00000004788	UPF3A	84	61.318	Otolemur_garnettii
ENSNBRG00000000828	upf3a	84	57.606	ENSOARG00000009004	UPF3A	84	58.065	Ovis_aries
ENSNBRG00000000828	upf3a	88	56.120	ENSPPAG00000042267	UPF3A	96	55.142	Pan_paniscus
ENSNBRG00000000828	upf3a	90	57.432	ENSPPRG00000025062	UPF3A	92	57.432	Panthera_pardus
ENSNBRG00000000828	upf3a	80	48.312	ENSPTRG00000041187	-	85	44.935	Pan_troglodytes
ENSNBRG00000000828	upf3a	80	44.675	ENSPTRG00000051640	-	85	42.857	Pan_troglodytes
ENSNBRG00000000828	upf3a	88	56.120	ENSPTRG00000006073	UPF3A	95	55.142	Pan_troglodytes
ENSNBRG00000000828	upf3a	93	57.047	ENSPANG00000004346	UPF3A	95	57.047	Papio_anubis
ENSNBRG00000000828	upf3a	97	71.369	ENSPKIG00000004422	upf3a	100	70.612	Paramormyrops_kingsleyae
ENSNBRG00000000828	upf3a	94	49.153	ENSPKIG00000019226	upf3b	88	67.361	Paramormyrops_kingsleyae
ENSNBRG00000000828	upf3a	83	67.677	ENSPSIG00000007468	UPF3A	96	67.677	Pelodiscus_sinensis
ENSNBRG00000000828	upf3a	100	83.093	ENSPMGG00000012696	upf3a	100	83.093	Periophthalmus_magnuspinnatus
ENSNBRG00000000828	upf3a	73	70.485	ENSPCIG00000019590	-	90	69.565	Phascolarctos_cinereus
ENSNBRG00000000828	upf3a	100	90.065	ENSPFOG00000013222	upf3a	100	90.065	Poecilia_formosa
ENSNBRG00000000828	upf3a	98	88.840	ENSPLAG00000011960	upf3a	100	88.840	Poecilia_latipinna
ENSNBRG00000000828	upf3a	100	85.921	ENSPMEG00000000836	upf3a	100	85.921	Poecilia_mexicana
ENSNBRG00000000828	upf3a	88	56.813	ENSPPYG00000005536	UPF3A	91	57.044	Pongo_abelii
ENSNBRG00000000828	upf3a	85	45.047	ENSPCOG00000021960	UPF3B	51	70.732	Propithecus_coquereli
ENSNBRG00000000828	upf3a	82	57.789	ENSPVAG00000005656	UPF3A	82	54.745	Pteropus_vampyrus
ENSNBRG00000000828	upf3a	100	95.842	ENSPNYG00000011289	upf3a	100	95.842	Pundamilia_nyererei
ENSNBRG00000000828	upf3a	83	50.831	ENSPNAG00000021528	upf3b	58	70.115	Pygocentrus_nattereri
ENSNBRG00000000828	upf3a	99	82.035	ENSPNAG00000019532	upf3a	100	82.035	Pygocentrus_nattereri
ENSNBRG00000000828	upf3a	87	58.151	ENSRBIG00000034007	UPF3A	93	57.971	Rhinopithecus_bieti
ENSNBRG00000000828	upf3a	85	59.148	ENSRROG00000012212	UPF3A	85	59.148	Rhinopithecus_roxellana
ENSNBRG00000000828	upf3a	77	55.263	ENSSBOG00000029989	UPF3A	95	49.138	Saimiri_boliviensis_boliviensis
ENSNBRG00000000828	upf3a	82	51.220	ENSSBOG00000019740	UPF3B	78	71.166	Saimiri_boliviensis_boliviensis
ENSNBRG00000000828	upf3a	83	67.172	ENSSHAG00000009895	UPF3A	94	68.010	Sarcophilus_harrisii
ENSNBRG00000000828	upf3a	98	72.527	ENSSFOG00015021851	upf3a	99	71.491	Scleropages_formosus
ENSNBRG00000000828	upf3a	100	84.521	ENSSMAG00000003858	upf3a	100	85.743	Scophthalmus_maximus
ENSNBRG00000000828	upf3a	52	68.127	ENSSMAG00000012913	upf3b	53	73.620	Scophthalmus_maximus
ENSNBRG00000000828	upf3a	100	93.319	ENSSDUG00000009680	upf3a	100	93.319	Seriola_dumerili
ENSNBRG00000000828	upf3a	100	96.544	ENSSLDG00000009700	upf3a	100	96.544	Seriola_lalandi_dorsalis
ENSNBRG00000000828	upf3a	100	95.680	ENSSPAG00000007938	upf3a	100	95.680	Stegastes_partitus
ENSNBRG00000000828	upf3a	81	58.163	ENSSSCG00000024679	UPF3A	51	69.378	Sus_scrofa
ENSNBRG00000000828	upf3a	82	68.354	ENSTGUG00000009493	UPF3A	99	68.354	Taeniopygia_guttata
ENSNBRG00000000828	upf3a	98	87.225	ENSTRUG00000012730	upf3a	99	87.033	Takifugu_rubripes
ENSNBRG00000000828	upf3a	83	77.411	ENSTNIG00000014973	upf3a	100	76.904	Tetraodon_nigroviridis
ENSNBRG00000000828	upf3a	72	55.587	ENSTTRG00000015414	UPF3A	73	55.587	Tursiops_truncatus
ENSNBRG00000000828	upf3a	84	45.564	ENSUAMG00000024565	UPF3B	66	63.750	Ursus_americanus
ENSNBRG00000000828	upf3a	82	46.269	ENSVVUG00000011594	UPF3B	83	66.854	Vulpes_vulpes
ENSNBRG00000000828	upf3a	90	55.972	ENSXETG00000002572	upf3a	100	55.972	Xenopus_tropicalis
ENSNBRG00000000828	upf3a	82	46.633	ENSXETG00000007440	upf3b	71	71.779	Xenopus_tropicalis
ENSNBRG00000000828	upf3a	100	90.086	ENSXMAG00000013452	upf3a	100	90.086	Xiphophorus_maculatus