EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000000940 (Gene tree)
Gene ID: 102797698
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: uncharacterized LOC102797698
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 10979 bases
Position: chrJH422424.1:1193823-1204801
Accession: 102797698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001149	PARP	PF00644.20	3.1e-30	1	1
ENSNBRP00000001138	PARP	PF00644.20	7e-30	1	1
ENSNBRP00000001144	PARP	PF00644.20	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001198	-	4778	-	ENSNBRP00000001144	1102 (aa)	-	-
ENSNBRT00000001192	-	2799	-	ENSNBRP00000001138	932 (aa)	-	-
ENSNBRT00000001208	-	4705	XM_006806060	ENSNBRP00000001149	1108 (aa)	XP_006806123	-

Gene Model

Click here to download ENSNBRG00000000940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000940's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000940	si:ch1073-296d18.1	86	92.079	ENSAPOG00000016910	si:ch1073-296d18.1	85	91.176	Acanthochromis_polyacanthus
ENSNBRG00000000940	si:ch1073-296d18.1	68	92.611	ENSAOCG00000007023	-	99	92.611	Amphiprion_ocellaris
ENSNBRG00000000940	si:ch1073-296d18.1	54	94.444	ENSAPEG00000005731	si:ch1073-296d18.1	84	93.970	Amphiprion_percula
ENSNBRG00000000940	si:ch1073-296d18.1	88	81.651	ENSATEG00000011078	si:ch1073-296d18.1	87	81.651	Anabas_testudineus
ENSNBRG00000000940	si:ch1073-296d18.1	55	32.653	ENSANAG00000037218	PARP10	67	33.162	Aotus_nancymaae
ENSNBRG00000000940	si:ch1073-296d18.1	62	98.913	ENSACLG00000012196	-	100	98.913	Astatotilapia_calliptera
ENSNBRG00000000940	si:ch1073-296d18.1	91	71.859	ENSAMXG00000039891	si:ch1073-296d18.1	85	71.859	Astyanax_mexicanus
ENSNBRG00000000940	si:ch1073-296d18.1	60	42.000	ENSCHIG00000008072	PARP10	72	32.762	Capra_hircus
ENSNBRG00000000940	si:ch1073-296d18.1	54	31.443	ENSTSYG00000005439	PARP10	58	32.069	Carlito_syrichta
ENSNBRG00000000940	si:ch1073-296d18.1	61	55.191	ENSCPOG00000014235	PARP10	66	55.191	Cavia_porcellus
ENSNBRG00000000940	si:ch1073-296d18.1	54	32.995	ENSCCAG00000024610	PARP10	55	52.973	Cebus_capucinus
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.677	ENSCATG00000025822	PARP10	53	48.315	Cercocebus_atys
ENSNBRG00000000940	si:ch1073-296d18.1	69	55.738	ENSCLAG00000013744	PARP10	74	55.738	Chinchilla_lanigera
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.675	ENSCSAG00000008843	PARP10	66	33.675	Chlorocebus_sabaeus
ENSNBRG00000000940	si:ch1073-296d18.1	86	61.202	ENSCPBG00000004075	PARP10	77	61.202	Chrysemys_picta_bellii
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.793	ENSCANG00000043564	PARP10	64	50.481	Colobus_angolensis_palliatus
ENSNBRG00000000940	si:ch1073-296d18.1	64	82.870	ENSCVAG00000014098	-	99	82.870	Cyprinodon_variegatus
ENSNBRG00000000940	si:ch1073-296d18.1	97	71.429	ENSDARG00000087145	si:ch1073-296d18.1	86	71.429	Danio_rerio
ENSNBRG00000000940	si:ch1073-296d18.1	54	32.807	ENSDNOG00000046110	PARP10	62	50.000	Dasypus_novemcinctus
ENSNBRG00000000940	si:ch1073-296d18.1	62	34.409	ENSEASG00005009729	PARP10	65	54.098	Equus_asinus_asinus
ENSNBRG00000000940	si:ch1073-296d18.1	55	41.833	ENSEEUG00000005507	PARP10	60	41.833	Erinaceus_europaeus
ENSNBRG00000000940	si:ch1073-296d18.1	97	77.273	ENSELUG00000001455	si:ch1073-296d18.1	88	77.273	Esox_lucius
ENSNBRG00000000940	si:ch1073-296d18.1	53	33.986	ENSFDAG00000015949	PARP10	58	34.698	Fukomys_damarensis
ENSNBRG00000000940	si:ch1073-296d18.1	61	65.347	ENSFHEG00000016698	-	99	65.347	Fundulus_heteroclitus
ENSNBRG00000000940	si:ch1073-296d18.1	70	71.707	ENSGMOG00000000853	si:ch1073-296d18.1	78	71.707	Gadus_morhua
ENSNBRG00000000940	si:ch1073-296d18.1	78	82.407	ENSGACG00000008798	si:ch1073-296d18.1	81	82.407	Gasterosteus_aculeatus
ENSNBRG00000000940	si:ch1073-296d18.1	54	32.069	ENSGGOG00000001802	PARP10	65	32.979	Gorilla_gorilla
ENSNBRG00000000940	si:ch1073-296d18.1	61	55.191	ENSHGLG00000010423	PARP10	63	48.325	Heterocephalus_glaber_female
ENSNBRG00000000940	si:ch1073-296d18.1	96	60.000	ENSIPUG00000011187	parp10	86	60.000	Ictalurus_punctatus
ENSNBRG00000000940	si:ch1073-296d18.1	50	53.005	ENSJJAG00000017801	Parp10	55	53.005	Jaculus_jaculus
ENSNBRG00000000940	si:ch1073-296d18.1	97	88.945	ENSKMAG00000002066	si:ch1073-296d18.1	85	88.945	Kryptolebias_marmoratus
ENSNBRG00000000940	si:ch1073-296d18.1	59	91.457	ENSLBEG00000003798	si:ch1073-296d18.1	97	93.085	Labrus_bergylta
ENSNBRG00000000940	si:ch1073-296d18.1	78	46.000	ENSLACG00000008645	PARP10	82	46.000	Latimeria_chalumnae
ENSNBRG00000000940	si:ch1073-296d18.1	97	42.691	ENSLOCG00000008505	si:ch1073-296d18.1	79	60.000	Lepisosteus_oculatus
ENSNBRG00000000940	si:ch1073-296d18.1	53	34.446	ENSLAFG00000004191	PARP10	51	53.714	Loxodonta_africana
ENSNBRG00000000940	si:ch1073-296d18.1	54	34.024	ENSMFAG00000044942	PARP10	65	34.024	Macaca_fascicularis
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.851	ENSMMUG00000000449	PARP10	64	33.851	Macaca_mulatta
ENSNBRG00000000940	si:ch1073-296d18.1	54	34.305	ENSMNEG00000034827	PARP10	65	34.305	Macaca_nemestrina
ENSNBRG00000000940	si:ch1073-296d18.1	88	92.462	ENSMAMG00000003770	si:ch1073-296d18.1	90	92.462	Mastacembelus_armatus
ENSNBRG00000000940	si:ch1073-296d18.1	54	35.192	ENSMICG00000016227	PARP10	66	50.725	Microcebus_murinus
ENSNBRG00000000940	si:ch1073-296d18.1	51	51.872	ENSMOCG00000000179	Parp10	53	51.872	Microtus_ochrogaster
ENSNBRG00000000940	si:ch1073-296d18.1	63	33.333	ENSMODG00000010393	-	69	33.333	Monodelphis_domestica
ENSNBRG00000000940	si:ch1073-296d18.1	63	34.513	MGP_CAROLIEiJ_G0019914	Parp10	97	59.813	Mus_caroli
ENSNBRG00000000940	si:ch1073-296d18.1	63	34.555	ENSMUSG00000063268	Parp10	96	59.813	Mus_musculus
ENSNBRG00000000940	si:ch1073-296d18.1	53	33.161	MGP_PahariEiJ_G0019924	Parp10	97	57.009	Mus_pahari
ENSNBRG00000000940	si:ch1073-296d18.1	63	34.615	MGP_SPRETEiJ_G0020817	Parp10	97	59.813	Mus_spretus
ENSNBRG00000000940	si:ch1073-296d18.1	53	34.397	ENSNGAG00000023968	Parp10	58	35.461	Nannospalax_galili
ENSNBRG00000000940	si:ch1073-296d18.1	50	33.145	ENSOPRG00000015616	-	52	33.209	Ochotona_princeps
ENSNBRG00000000940	si:ch1073-296d18.1	53	34.588	ENSODEG00000014276	PARP10	64	53.552	Octodon_degus
ENSNBRG00000000940	si:ch1073-296d18.1	77	95.477	ENSONIG00000007669	si:ch1073-296d18.1	87	95.000	Oreochromis_niloticus
ENSNBRG00000000940	si:ch1073-296d18.1	73	39.362	ENSOANG00000013123	-	86	39.362	Ornithorhynchus_anatinus
ENSNBRG00000000940	si:ch1073-296d18.1	93	83.838	ENSORLG00015010006	si:ch1073-296d18.1	87	83.838	Oryzias_latipes_hsok
ENSNBRG00000000940	si:ch1073-296d18.1	86	78.431	ENSOMEG00000011731	si:ch1073-296d18.1	83	78.431	Oryzias_melastigma
ENSNBRG00000000940	si:ch1073-296d18.1	53	34.192	ENSOGAG00000033747	PARP10	66	34.423	Otolemur_garnettii
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.849	ENSPANG00000023348	PARP10	76	32.657	Papio_anubis
ENSNBRG00000000940	si:ch1073-296d18.1	97	86.432	ENSPFOG00000013067	si:ch1073-296d18.1	90	86.139	Poecilia_formosa
ENSNBRG00000000940	si:ch1073-296d18.1	62	87.000	ENSPLAG00000022710	-	99	87.000	Poecilia_latipinna
ENSNBRG00000000940	si:ch1073-296d18.1	62	87.000	ENSPMEG00000019504	-	99	87.000	Poecilia_mexicana
ENSNBRG00000000940	si:ch1073-296d18.1	64	33.217	ENSPCAG00000001115	PARP10	80	34.261	Procavia_capensis
ENSNBRG00000000940	si:ch1073-296d18.1	54	34.583	ENSPCOG00000028616	PARP10	67	51.471	Propithecus_coquereli
ENSNBRG00000000940	si:ch1073-296d18.1	54	30.986	ENSPVAG00000006369	PARP10	55	53.552	Pteropus_vampyrus
ENSNBRG00000000940	si:ch1073-296d18.1	62	89.674	ENSPNYG00000005086	-	100	89.674	Pundamilia_nyererei
ENSNBRG00000000940	si:ch1073-296d18.1	97	70.854	ENSPNAG00000024484	si:ch1073-296d18.1	88	70.854	Pygocentrus_nattereri
ENSNBRG00000000940	si:ch1073-296d18.1	53	35.009	ENSRNOG00000004361	Parp10	57	34.507	Rattus_norvegicus
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.391	ENSRBIG00000040506	PARP10	65	33.391	Rhinopithecus_bieti
ENSNBRG00000000940	si:ch1073-296d18.1	54	33.219	ENSRROG00000039086	PARP10	64	33.219	Rhinopithecus_roxellana
ENSNBRG00000000940	si:ch1073-296d18.1	65	34.211	ENSSHAG00000002568	-	72	34.211	Sarcophilus_harrisii
ENSNBRG00000000940	si:ch1073-296d18.1	53	70.067	ENSSMAG00000020545	-	99	70.067	Scophthalmus_maximus
ENSNBRG00000000940	si:ch1073-296d18.1	61	94.500	ENSSLDG00000003545	-	100	94.500	Seriola_lalandi_dorsalis
ENSNBRG00000000940	si:ch1073-296d18.1	62	90.099	ENSSPAG00000005439	-	99	90.099	Stegastes_partitus
ENSNBRG00000000940	si:ch1073-296d18.1	91	46.047	ENSTNIG00000014023	si:ch1073-296d18.1	88	49.479	Tetraodon_nigroviridis
ENSNBRG00000000940	si:ch1073-296d18.1	53	50.267	ENSTTRG00000006314	PARP10	69	50.267	Tursiops_truncatus
ENSNBRG00000000940	si:ch1073-296d18.1	62	86.500	ENSXCOG00000003615	-	98	86.500	Xiphophorus_couchianus
ENSNBRG00000000940	si:ch1073-296d18.1	62	86.500	ENSXMAG00000025112	-	98	86.500	Xiphophorus_maculatus