EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000000972 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 1466 bases
Position: chrAFNY01114618.1:22-1487
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001139	RVT_1	PF00078.27	9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001193	-	1209	-	ENSNBRP00000001139	403 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000000972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000000972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000000972	-	63	36.863	ENSNBRG00000013792	-	74	36.863
ENSNBRG00000000972	-	90	44.687	ENSNBRG00000012595	-	83	44.536
ENSNBRG00000000972	-	69	32.624	ENSNBRG00000022130	-	67	32.624
ENSNBRG00000000972	-	52	32.420	ENSNBRG00000007566	-	56	32.420
ENSNBRG00000000972	-	79	30.625	ENSNBRG00000001934	-	68	30.625

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000000972	-	72	37.329	ENSAPOG00000014771	-	72	37.329	Acanthochromis_polyacanthus
ENSNBRG00000000972	-	71	37.500	ENSAPOG00000001366	-	77	38.214	Acanthochromis_polyacanthus
ENSNBRG00000000972	-	75	45.307	ENSAPOG00000015742	-	97	45.307	Acanthochromis_polyacanthus
ENSNBRG00000000972	-	84	36.257	ENSACIG00000010538	-	89	36.257	Amphilophus_citrinellus
ENSNBRG00000000972	-	64	31.852	ENSACIG00000020849	-	71	31.852	Amphilophus_citrinellus
ENSNBRG00000000972	-	83	47.321	ENSAOCG00000000894	-	100	47.321	Amphiprion_ocellaris
ENSNBRG00000000972	-	91	33.607	ENSAOCG00000006855	-	82	33.607	Amphiprion_ocellaris
ENSNBRG00000000972	-	92	32.086	ENSAOCG00000012592	-	80	32.086	Amphiprion_ocellaris
ENSNBRG00000000972	-	93	40.267	ENSAOCG00000014605	-	74	40.267	Amphiprion_ocellaris
ENSNBRG00000000972	-	85	45.507	ENSAOCG00000019069	-	94	45.507	Amphiprion_ocellaris
ENSNBRG00000000972	-	80	32.326	ENSATEG00000019721	-	84	32.424	Anabas_testudineus
ENSNBRG00000000972	-	74	34.323	ENSACAG00000010816	-	85	34.323	Anolis_carolinensis
ENSNBRG00000000972	-	79	45.768	ENSACLG00000012857	-	87	45.768	Astatotilapia_calliptera
ENSNBRG00000000972	-	80	33.233	ENSACLG00000011319	-	85	33.233	Astatotilapia_calliptera
ENSNBRG00000000972	-	66	46.992	ENSACLG00000010837	-	65	46.816	Astatotilapia_calliptera
ENSNBRG00000000972	-	87	45.480	ENSACLG00000013571	-	87	45.480	Astatotilapia_calliptera
ENSNBRG00000000972	-	75	45.724	ENSAMXG00000040763	-	77	45.574	Astyanax_mexicanus
ENSNBRG00000000972	-	65	49.430	ENSAMXG00000041014	-	99	49.430	Astyanax_mexicanus
ENSNBRG00000000972	-	50	39.512	ENSCPBG00000017828	-	55	39.512	Chrysemys_picta_bellii
ENSNBRG00000000972	-	93	39.578	ENSCVAG00000020933	-	85	39.578	Cyprinodon_variegatus
ENSNBRG00000000972	-	84	44.543	ENSCVAG00000018360	-	82	44.543	Cyprinodon_variegatus
ENSNBRG00000000972	-	98	33.831	ENSCVAG00000007707	-	55	35.185	Cyprinodon_variegatus
ENSNBRG00000000972	-	98	32.500	ENSELUG00000014378	-	87	34.247	Esox_lucius
ENSNBRG00000000972	-	85	31.909	ENSGAGG00000013921	-	92	31.909	Gopherus_agassizii
ENSNBRG00000000972	-	61	30.894	ENSHBUG00000003796	-	57	30.894	Haplochromis_burtoni
ENSNBRG00000000972	-	73	32.997	ENSHBUG00000011715	-	75	32.997	Haplochromis_burtoni
ENSNBRG00000000972	-	86	41.379	ENSHBUG00000007736	-	84	41.379	Haplochromis_burtoni
ENSNBRG00000000972	-	61	32.400	ENSIPUG00000010242	-	66	32.400	Ictalurus_punctatus
ENSNBRG00000000972	-	83	45.401	ENSKMAG00000014393	-	79	45.401	Kryptolebias_marmoratus
ENSNBRG00000000972	-	79	42.633	ENSLBEG00000004148	-	67	42.633	Labrus_bergylta
ENSNBRG00000000972	-	82	41.867	ENSLBEG00000023714	-	89	41.867	Labrus_bergylta
ENSNBRG00000000972	-	87	36.080	ENSLBEG00000020242	-	93	36.471	Labrus_bergylta
ENSNBRG00000000972	-	93	40.000	ENSLBEG00000015758	-	55	40.000	Labrus_bergylta
ENSNBRG00000000972	-	92	44.920	ENSMZEG00005011529	-	70	44.920	Maylandia_zebra
ENSNBRG00000000972	-	80	32.931	ENSMZEG00005025877	-	76	32.931	Maylandia_zebra
ENSNBRG00000000972	-	69	45.520	ENSMZEG00005016362	-	98	45.520	Maylandia_zebra
ENSNBRG00000000972	-	80	32.931	ENSMZEG00005008304	-	76	32.931	Maylandia_zebra
ENSNBRG00000000972	-	92	44.920	ENSMZEG00005017030	-	71	44.920	Maylandia_zebra
ENSNBRG00000000972	-	63	49.027	ENSMZEG00005006211	-	62	49.027	Maylandia_zebra
ENSNBRG00000000972	-	87	45.014	ENSORLG00000024236	-	92	45.014	Oryzias_latipes
ENSNBRG00000000972	-	95	39.075	ENSORLG00000024464	-	61	39.623	Oryzias_latipes
ENSNBRG00000000972	-	66	50.000	ENSORLG00000028976	-	70	50.000	Oryzias_latipes
ENSNBRG00000000972	-	93	43.236	ENSORLG00000023713	-	96	43.236	Oryzias_latipes
ENSNBRG00000000972	-	77	44.409	ENSORLG00000028454	-	98	44.516	Oryzias_latipes
ENSNBRG00000000972	-	75	46.865	ENSORLG00000028706	-	61	46.711	Oryzias_latipes
ENSNBRG00000000972	-	75	46.205	ENSORLG00020018629	-	79	46.205	Oryzias_latipes_hni
ENSNBRG00000000972	-	59	51.452	ENSORLG00020007002	-	95	51.452	Oryzias_latipes_hni
ENSNBRG00000000972	-	75	46.865	ENSORLG00020007779	-	80	46.865	Oryzias_latipes_hni
ENSNBRG00000000972	-	91	44.986	ENSORLG00020014626	-	68	44.986	Oryzias_latipes_hni
ENSNBRG00000000972	-	75	47.195	ENSORLG00020010425	-	52	47.195	Oryzias_latipes_hni
ENSNBRG00000000972	-	78	45.714	ENSORLG00020014149	-	98	45.714	Oryzias_latipes_hni
ENSNBRG00000000972	-	70	30.249	ENSORLG00020004063	-	80	30.249	Oryzias_latipes_hni
ENSNBRG00000000972	-	65	46.947	ENSORLG00020016429	-	51	46.947	Oryzias_latipes_hni
ENSNBRG00000000972	-	68	43.321	ENSORLG00020022004	-	95	43.321	Oryzias_latipes_hni
ENSNBRG00000000972	-	82	39.640	ENSORLG00015020895	-	89	39.640	Oryzias_latipes_hsok
ENSNBRG00000000972	-	59	47.479	ENSORLG00015007976	-	63	47.479	Oryzias_latipes_hsok
ENSNBRG00000000972	-	64	34.231	ENSORLG00015021848	-	85	34.231	Oryzias_latipes_hsok
ENSNBRG00000000972	-	61	37.500	ENSORLG00015008227	-	69	37.500	Oryzias_latipes_hsok
ENSNBRG00000000972	-	75	46.535	ENSORLG00015007703	-	77	46.382	Oryzias_latipes_hsok
ENSNBRG00000000972	-	92	39.142	ENSORLG00015021206	-	71	39.142	Oryzias_latipes_hsok
ENSNBRG00000000972	-	72	45.205	ENSORLG00015022393	-	97	45.205	Oryzias_latipes_hsok
ENSNBRG00000000972	-	69	43.617	ENSORLG00015000419	-	80	43.617	Oryzias_latipes_hsok
ENSNBRG00000000972	-	91	32.973	ENSOMEG00000013211	-	83	33.611	Oryzias_melastigma
ENSNBRG00000000972	-	68	47.826	ENSPKIG00000013511	-	95	47.826	Paramormyrops_kingsleyae
ENSNBRG00000000972	-	61	46.154	ENSPKIG00000024018	-	87	46.154	Paramormyrops_kingsleyae
ENSNBRG00000000972	-	73	35.374	ENSPMGG00000014421	-	68	35.374	Periophthalmus_magnuspinnatus
ENSNBRG00000000972	-	86	34.085	ENSPLAG00000015080	-	83	34.085	Poecilia_latipinna
ENSNBRG00000000972	-	58	34.298	ENSPMEG00000004673	-	60	34.298	Poecilia_mexicana
ENSNBRG00000000972	-	90	42.975	ENSPREG00000006501	-	64	42.975	Poecilia_reticulata
ENSNBRG00000000972	-	85	35.043	ENSPREG00000004933	-	87	35.043	Poecilia_reticulata
ENSNBRG00000000972	-	82	35.030	ENSPREG00000001352	-	93	35.030	Poecilia_reticulata
ENSNBRG00000000972	-	84	36.735	ENSPREG00000010319	-	81	36.735	Poecilia_reticulata
ENSNBRG00000000972	-	86	31.124	ENSPREG00000021355	-	86	30.792	Poecilia_reticulata
ENSNBRG00000000972	-	73	41.611	ENSPNYG00000002466	-	99	41.611	Pundamilia_nyererei
ENSNBRG00000000972	-	74	34.884	ENSPNYG00000023697	-	70	34.884	Pundamilia_nyererei
ENSNBRG00000000972	-	61	39.823	ENSPNAG00000010780	-	64	39.823	Pygocentrus_nattereri
ENSNBRG00000000972	-	74	41.751	ENSPNAG00000010342	-	96	41.751	Pygocentrus_nattereri
ENSNBRG00000000972	-	98	41.604	ENSPNAG00000002786	-	97	41.604	Pygocentrus_nattereri
ENSNBRG00000000972	-	74	47.000	ENSPNAG00000014375	-	73	47.000	Pygocentrus_nattereri
ENSNBRG00000000972	-	86	32.571	ENSPNAG00000024211	-	73	32.471	Pygocentrus_nattereri
ENSNBRG00000000972	-	93	32.626	ENSPNAG00000024749	-	88	32.626	Pygocentrus_nattereri
ENSNBRG00000000972	-	82	40.541	ENSSMAG00000014015	-	73	40.541	Scophthalmus_maximus
ENSNBRG00000000972	-	62	34.127	ENSSDUG00000017945	-	70	34.127	Seriola_dumerili
ENSNBRG00000000972	-	73	45.819	ENSSDUG00000021791	-	99	45.819	Seriola_dumerili
ENSNBRG00000000972	-	73	33.557	ENSSDUG00000015364	-	64	33.557	Seriola_dumerili
ENSNBRG00000000972	-	93	36.193	ENSSLDG00000006955	-	90	36.193	Seriola_lalandi_dorsalis
ENSNBRG00000000972	-	94	40.933	ENSSPUG00000015446	-	81	42.149	Sphenodon_punctatus
ENSNBRG00000000972	-	90	43.288	ENSSPAG00000000151	-	80	43.288	Stegastes_partitus
ENSNBRG00000000972	-	79	33.229	ENSSPAG00000012089	-	87	33.229	Stegastes_partitus
ENSNBRG00000000972	-	88	32.584	ENSSPAG00000009351	-	58	32.584	Stegastes_partitus
ENSNBRG00000000972	-	93	36.815	ENSXETG00000034134	-	51	36.815	Xenopus_tropicalis
ENSNBRG00000000972	-	79	36.050	ENSXCOG00000016894	-	93	36.050	Xiphophorus_couchianus
ENSNBRG00000000972	-	87	32.486	ENSXMAG00000023211	-	75	32.941	Xiphophorus_maculatus
ENSNBRG00000000972	-	72	46.599	ENSXMAG00000026184	-	98	46.599	Xiphophorus_maculatus