EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000001049 (Gene tree)
Gene ID: 102799994
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: nucleolar pre-ribosomal-associated protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 16698 bases
Position: chrJH422318.1:2031244-2047941
Accession: 102799994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001350	Npa1	PF11707.8	1.9e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001410	-	5397	XM_006796707	ENSNBRP00000001350	1798 (aa)	XP_006796770	-

Gene Model

Click here to download ENSNBRG00000001049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001049's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001049	urb1	98	46.229	ENSG00000142207	URB1	82	45.942	Homo_sapiens
ENSNBRG00000001049	urb1	99	72.047	ENSAPOG00000020308	urb1	84	72.390	Acanthochromis_polyacanthus
ENSNBRG00000001049	urb1	99	44.835	ENSAMEG00000011998	URB1	82	44.946	Ailuropoda_melanoleuca
ENSNBRG00000001049	urb1	96	81.977	ENSACIG00000003248	urb1	80	81.977	Amphilophus_citrinellus
ENSNBRG00000001049	urb1	99	69.722	ENSAOCG00000010364	urb1	85	70.069	Amphiprion_ocellaris
ENSNBRG00000001049	urb1	99	69.854	ENSAPEG00000010758	urb1	83	70.201	Amphiprion_percula
ENSNBRG00000001049	urb1	99	70.588	ENSATEG00000011790	urb1	82	70.588	Anabas_testudineus
ENSNBRG00000001049	urb1	96	46.917	ENSAPLG00000012791	URB1	81	46.917	Anas_platyrhynchos
ENSNBRG00000001049	urb1	99	45.529	ENSACAG00000002817	URB1	81	45.905	Anolis_carolinensis
ENSNBRG00000001049	urb1	99	45.982	ENSANAG00000024617	URB1	82	45.699	Aotus_nancymaae
ENSNBRG00000001049	urb1	99	91.580	ENSACLG00000024865	urb1	83	91.580	Astatotilapia_calliptera
ENSNBRG00000001049	urb1	99	48.681	ENSAMXG00000012306	urb1	81	48.681	Astyanax_mexicanus
ENSNBRG00000001049	urb1	99	44.658	ENSBTAG00000012412	URB1	82	44.832	Bos_taurus
ENSNBRG00000001049	urb1	98	45.626	ENSCJAG00000009118	URB1	82	45.348	Callithrix_jacchus
ENSNBRG00000001049	urb1	99	44.483	ENSCAFG00000008892	URB1	82	44.483	Canis_familiaris
ENSNBRG00000001049	urb1	99	44.421	ENSCAFG00020025987	-	82	44.421	Canis_lupus_dingo
ENSNBRG00000001049	urb1	99	44.697	ENSCAFG00020025994	-	83	44.697	Canis_lupus_dingo
ENSNBRG00000001049	urb1	99	44.497	ENSCHIG00000015645	URB1	83	44.497	Capra_hircus
ENSNBRG00000001049	urb1	99	45.010	ENSTSYG00000013286	URB1	82	45.079	Carlito_syrichta
ENSNBRG00000001049	urb1	97	43.795	ENSCAPG00000015589	URB1	81	43.826	Cavia_aperea
ENSNBRG00000001049	urb1	99	44.672	ENSCPOG00000006748	URB1	83	44.733	Cavia_porcellus
ENSNBRG00000001049	urb1	98	45.848	ENSCCAG00000021299	URB1	82	45.567	Cebus_capucinus
ENSNBRG00000001049	urb1	99	45.879	ENSCATG00000042630	URB1	82	46.054	Cercocebus_atys
ENSNBRG00000001049	urb1	99	45.554	ENSCLAG00000005262	URB1	82	45.517	Chinchilla_lanigera
ENSNBRG00000001049	urb1	99	44.945	ENSCSAG00000009584	URB1	82	45.119	Chlorocebus_sabaeus
ENSNBRG00000001049	urb1	99	47.948	ENSCPBG00000006454	URB1	82	48.016	Chrysemys_picta_bellii
ENSNBRG00000001049	urb1	99	45.773	ENSCANG00000031088	URB1	82	45.948	Colobus_angolensis_palliatus
ENSNBRG00000001049	urb1	98	45.754	ENSCGRG00001010616	Urb1	82	45.592	Cricetulus_griseus_chok1gshd
ENSNBRG00000001049	urb1	97	46.017	ENSCGRG00000015840	Urb1	82	46.094	Cricetulus_griseus_crigri
ENSNBRG00000001049	urb1	99	65.614	ENSCSEG00000012616	urb1	81	65.614	Cynoglossus_semilaevis
ENSNBRG00000001049	urb1	95	67.308	ENSCVAG00000009076	urb1	87	65.035	Cyprinodon_variegatus
ENSNBRG00000001049	urb1	99	52.868	ENSDARG00000060308	urb1	82	52.868	Danio_rerio
ENSNBRG00000001049	urb1	77	45.730	ENSDNOG00000015586	URB1	74	45.730	Dasypus_novemcinctus
ENSNBRG00000001049	urb1	99	45.286	ENSDORG00000006735	Urb1	82	45.461	Dipodomys_ordii
ENSNBRG00000001049	urb1	81	51.648	ENSETEG00000009080	URB1	67	51.648	Echinops_telfairi
ENSNBRG00000001049	urb1	99	43.375	ENSEASG00005007711	URB1	89	42.022	Equus_asinus_asinus
ENSNBRG00000001049	urb1	99	45.361	ENSECAG00000013206	URB1	82	45.323	Equus_caballus
ENSNBRG00000001049	urb1	99	57.013	ENSELUG00000020516	urb1	83	57.153	Esox_lucius
ENSNBRG00000001049	urb1	99	45.041	ENSFCAG00000002177	URB1	82	45.110	Felis_catus
ENSNBRG00000001049	urb1	97	44.806	ENSFALG00000004636	URB1	81	45.138	Ficedula_albicollis
ENSNBRG00000001049	urb1	98	46.025	ENSFDAG00000007288	URB1	78	45.622	Fukomys_damarensis
ENSNBRG00000001049	urb1	99	63.280	ENSFHEG00000000202	urb1	81	63.350	Fundulus_heteroclitus
ENSNBRG00000001049	urb1	92	56.866	ENSGMOG00000001838	urb1	76	56.954	Gadus_morhua
ENSNBRG00000001049	urb1	98	46.890	ENSGALG00000015887	URB1	80	47.027	Gallus_gallus
ENSNBRG00000001049	urb1	99	66.575	ENSGAFG00000020694	urb1	81	66.575	Gambusia_affinis
ENSNBRG00000001049	urb1	99	68.636	ENSGACG00000011703	urb1	82	68.636	Gasterosteus_aculeatus
ENSNBRG00000001049	urb1	99	47.577	ENSGAGG00000022544	URB1	82	47.577	Gopherus_agassizii
ENSNBRG00000001049	urb1	99	46.229	ENSGGOG00000000285	URB1	82	45.942	Gorilla_gorilla
ENSNBRG00000001049	urb1	99	91.301	ENSHBUG00000001904	urb1	83	91.301	Haplochromis_burtoni
ENSNBRG00000001049	urb1	99	44.594	ENSHGLG00000004907	URB1	82	44.527	Heterocephalus_glaber_female
ENSNBRG00000001049	urb1	99	45.511	ENSHGLG00100010749	URB1	82	45.442	Heterocephalus_glaber_male
ENSNBRG00000001049	urb1	66	62.901	ENSHCOG00000018683	urb1	71	62.901	Hippocampus_comes
ENSNBRG00000001049	urb1	99	46.617	ENSIPUG00000014721	urb1	82	46.892	Ictalurus_punctatus
ENSNBRG00000001049	urb1	98	45.168	ENSSTOG00000004539	URB1	82	44.654	Ictidomys_tridecemlineatus
ENSNBRG00000001049	urb1	99	67.535	ENSKMAG00000006001	urb1	79	72.618	Kryptolebias_marmoratus
ENSNBRG00000001049	urb1	95	68.529	ENSLBEG00000027208	urb1	81	68.529	Labrus_bergylta
ENSNBRG00000001049	urb1	95	44.724	ENSLACG00000017059	URB1	79	44.966	Latimeria_chalumnae
ENSNBRG00000001049	urb1	99	55.201	ENSLOCG00000009190	urb1	81	55.201	Lepisosteus_oculatus
ENSNBRG00000001049	urb1	98	44.945	ENSLAFG00000010407	URB1	80	44.875	Loxodonta_africana
ENSNBRG00000001049	urb1	99	45.704	ENSMFAG00000034391	URB1	79	45.879	Macaca_fascicularis
ENSNBRG00000001049	urb1	99	45.461	ENSMMUG00000010295	URB1	82	45.636	Macaca_mulatta
ENSNBRG00000001049	urb1	99	44.567	ENSMNEG00000032981	URB1	82	44.742	Macaca_nemestrina
ENSNBRG00000001049	urb1	99	45.942	ENSMLEG00000041435	URB1	82	46.117	Mandrillus_leucophaeus
ENSNBRG00000001049	urb1	99	67.448	ENSMAMG00000011238	urb1	83	67.448	Mastacembelus_armatus
ENSNBRG00000001049	urb1	99	83.369	ENSMZEG00005011862	urb1	83	83.369	Maylandia_zebra
ENSNBRG00000001049	urb1	97	47.187	ENSMGAG00000014512	URB1	81	47.468	Meleagris_gallopavo
ENSNBRG00000001049	urb1	89	53.707	ENSMAUG00000010516	Urb1	79	52.959	Mesocricetus_auratus
ENSNBRG00000001049	urb1	99	45.003	ENSMICG00000016424	URB1	82	45.072	Microcebus_murinus
ENSNBRG00000001049	urb1	97	45.052	ENSMOCG00000012613	Urb1	80	45.059	Microtus_ochrogaster
ENSNBRG00000001049	urb1	98	44.966	ENSMODG00000021076	URB1	81	44.966	Monodelphis_domestica
ENSNBRG00000001049	urb1	99	70.121	ENSMALG00000017411	urb1	82	69.858	Monopterus_albus
ENSNBRG00000001049	urb1	98	44.890	MGP_CAROLIEiJ_G0020948	Urb1	80	45.028	Mus_caroli
ENSNBRG00000001049	urb1	99	44.720	ENSMUSG00000039929	Urb1	81	44.621	Mus_musculus
ENSNBRG00000001049	urb1	98	45.103	MGP_PahariEiJ_G0016653	Urb1	80	45.248	Mus_pahari
ENSNBRG00000001049	urb1	98	45.283	MGP_SPRETEiJ_G0021854	Urb1	81	44.773	Mus_spretus
ENSNBRG00000001049	urb1	99	45.117	ENSMPUG00000001123	URB1	81	45.210	Mustela_putorius_furo
ENSNBRG00000001049	urb1	99	44.899	ENSNGAG00000001905	Urb1	81	44.906	Nannospalax_galili
ENSNBRG00000001049	urb1	98	44.064	ENSNLEG00000026872	URB1	82	43.810	Nomascus_leucogenys
ENSNBRG00000001049	urb1	90	55.114	ENSMEUG00000010828	URB1	79	41.205	Notamacropus_eugenii
ENSNBRG00000001049	urb1	98	44.062	ENSOPRG00000013482	URB1	80	44.070	Ochotona_princeps
ENSNBRG00000001049	urb1	99	44.997	ENSODEG00000002587	URB1	81	44.997	Octodon_degus
ENSNBRG00000001049	urb1	99	89.569	ENSONIG00000005599	urb1	83	89.569	Oreochromis_niloticus
ENSNBRG00000001049	urb1	98	46.048	ENSOCUG00000009381	URB1	80	46.048	Oryctolagus_cuniculus
ENSNBRG00000001049	urb1	99	65.811	ENSORLG00000003429	urb1	82	65.994	Oryzias_latipes
ENSNBRG00000001049	urb1	99	65.510	ENSORLG00020013785	urb1	82	65.510	Oryzias_latipes_hni
ENSNBRG00000001049	urb1	99	63.924	ENSORLG00015019421	urb1	82	63.924	Oryzias_latipes_hsok
ENSNBRG00000001049	urb1	73	69.855	ENSOMEG00000002094	urb1	74	69.855	Oryzias_melastigma
ENSNBRG00000001049	urb1	99	46.345	ENSOGAG00000017140	URB1	82	46.308	Otolemur_garnettii
ENSNBRG00000001049	urb1	94	47.660	ENSOARG00000013679	URB1	81	47.039	Ovis_aries
ENSNBRG00000001049	urb1	99	46.229	ENSPPAG00000003423	URB1	82	45.942	Pan_paniscus
ENSNBRG00000001049	urb1	99	45.217	ENSPPRG00000023131	URB1	82	45.286	Panthera_pardus
ENSNBRG00000001049	urb1	84	44.223	ENSPTIG00000016125	URB1	73	44.294	Panthera_tigris_altaica
ENSNBRG00000001049	urb1	99	46.089	ENSPTRG00000013852	URB1	82	45.805	Pan_troglodytes
ENSNBRG00000001049	urb1	99	45.873	ENSPANG00000021964	URB1	82	46.085	Papio_anubis
ENSNBRG00000001049	urb1	99	53.002	ENSPKIG00000003683	urb1	81	53.002	Paramormyrops_kingsleyae
ENSNBRG00000001049	urb1	98	45.423	ENSPEMG00000021205	Urb1	80	45.423	Peromyscus_maniculatus_bairdii
ENSNBRG00000001049	urb1	66	31.442	ENSPMAG00000009733	URB1	72	31.567	Petromyzon_marinus
ENSNBRG00000001049	urb1	99	44.762	ENSPCIG00000016350	URB1	82	44.762	Phascolarctos_cinereus
ENSNBRG00000001049	urb1	96	68.278	ENSPLAG00000004371	urb1	83	68.278	Poecilia_latipinna
ENSNBRG00000001049	urb1	99	68.850	ENSPMEG00000006634	urb1	82	67.571	Poecilia_mexicana
ENSNBRG00000001049	urb1	99	68.058	ENSPREG00000013453	urb1	83	68.058	Poecilia_reticulata
ENSNBRG00000001049	urb1	99	45.636	ENSPPYG00000011359	URB1	82	45.636	Pongo_abelii
ENSNBRG00000001049	urb1	99	41.269	ENSPCAG00000007430	URB1	81	41.201	Procavia_capensis
ENSNBRG00000001049	urb1	99	45.667	ENSPCOG00000022695	URB1	82	45.630	Propithecus_coquereli
ENSNBRG00000001049	urb1	98	45.392	ENSPVAG00000000889	URB1	80	45.461	Pteropus_vampyrus
ENSNBRG00000001049	urb1	99	90.773	ENSPNYG00000010589	urb1	80	90.773	Pundamilia_nyererei
ENSNBRG00000001049	urb1	99	48.587	ENSPNAG00000019324	urb1	81	48.897	Pygocentrus_nattereri
ENSNBRG00000001049	urb1	98	45.079	ENSRNOG00000002080	Urb1	81	45.223	Rattus_norvegicus
ENSNBRG00000001049	urb1	99	45.498	ENSRBIG00000033122	URB1	82	45.673	Rhinopithecus_bieti
ENSNBRG00000001049	urb1	99	45.392	ENSRROG00000040237	URB1	82	45.567	Rhinopithecus_roxellana
ENSNBRG00000001049	urb1	98	45.664	ENSSBOG00000027672	URB1	82	45.386	Saimiri_boliviensis_boliviensis
ENSNBRG00000001049	urb1	99	45.185	ENSSHAG00000005140	URB1	82	45.253	Sarcophilus_harrisii
ENSNBRG00000001049	urb1	90	53.608	ENSSFOG00015000339	urb1	79	54.164	Scleropages_formosus
ENSNBRG00000001049	urb1	99	70.609	ENSSMAG00000003782	urb1	83	71.093	Scophthalmus_maximus
ENSNBRG00000001049	urb1	99	74.792	ENSSDUG00000012313	urb1	83	74.792	Seriola_dumerili
ENSNBRG00000001049	urb1	99	74.444	ENSSLDG00000023179	urb1	83	74.444	Seriola_lalandi_dorsalis
ENSNBRG00000001049	urb1	99	48.019	ENSSPUG00000012447	URB1	83	48.019	Sphenodon_punctatus
ENSNBRG00000001049	urb1	99	73.731	ENSSPAG00000006325	urb1	83	74.005	Stegastes_partitus
ENSNBRG00000001049	urb1	98	44.391	ENSSSCG00000032024	URB1	81	44.391	Sus_scrofa
ENSNBRG00000001049	urb1	72	45.928	ENSTGUG00000013442	URB1	81	45.928	Taeniopygia_guttata
ENSNBRG00000001049	urb1	99	66.690	ENSTRUG00000009372	urb1	83	66.713	Takifugu_rubripes
ENSNBRG00000001049	urb1	98	66.596	ENSTNIG00000016277	urb1	83	66.667	Tetraodon_nigroviridis
ENSNBRG00000001049	urb1	65	46.687	ENSTBEG00000010044	URB1	59	46.687	Tupaia_belangeri
ENSNBRG00000001049	urb1	88	49.896	ENSTTRG00000007712	URB1	75	49.948	Tursiops_truncatus
ENSNBRG00000001049	urb1	99	44.932	ENSUAMG00000012231	URB1	82	44.832	Ursus_americanus
ENSNBRG00000001049	urb1	84	45.389	ENSUMAG00000017419	URB1	77	45.018	Ursus_maritimus
ENSNBRG00000001049	urb1	74	59.441	ENSVPAG00000001164	URB1	60	59.441	Vicugna_pacos
ENSNBRG00000001049	urb1	99	44.859	ENSVVUG00000000551	URB1	83	43.921	Vulpes_vulpes
ENSNBRG00000001049	urb1	98	46.378	ENSXETG00000009895	urb1	82	46.378	Xenopus_tropicalis
ENSNBRG00000001049	urb1	99	67.194	ENSXCOG00000005500	urb1	85	67.194	Xiphophorus_couchianus
ENSNBRG00000001049	urb1	99	67.424	ENSXMAG00000007253	urb1	84	67.424	Xiphophorus_maculatus