EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000001462 (Gene tree)
Gene ID: 102777118
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2 subunit C-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5561 bases
Position: chrJH422275.1:2547157-2552717
Accession: 102777118
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001796	RNase_H2_suC	PF08615.11	9.9e-20	1	1
ENSNBRP00000001811	RNase_H2_suC	PF08615.11	9.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001887	-	411	XM_006781308	ENSNBRP00000001811	136 (aa)	XP_006781371	UPI0003AF3D02
ENSNBRT00000001872	-	3110	-	ENSNBRP00000001796	136 (aa)	-	UPI0003AF3D02

Gene Model

Click here to download ENSNBRG00000001462's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001462	rnaseh2c	100	88.971	ENSAPOG00000012901	rnaseh2c	99	88.971	Acanthochromis_polyacanthus
ENSNBRG00000001462	rnaseh2c	100	88.971	ENSACIG00000022433	rnaseh2c	100	88.971	Amphilophus_citrinellus
ENSNBRG00000001462	rnaseh2c	100	88.235	ENSAOCG00000016855	rnaseh2c	100	88.235	Amphiprion_ocellaris
ENSNBRG00000001462	rnaseh2c	100	88.971	ENSAPEG00000009850	rnaseh2c	100	88.971	Amphiprion_percula
ENSNBRG00000001462	rnaseh2c	100	84.559	ENSATEG00000014395	rnaseh2c	100	84.559	Anabas_testudineus
ENSNBRG00000001462	rnaseh2c	100	97.794	ENSACLG00000016950	rnaseh2c	100	97.794	Astatotilapia_calliptera
ENSNBRG00000001462	rnaseh2c	99	64.444	ENSAMXG00000001210	rnaseh2c	100	64.444	Astyanax_mexicanus
ENSNBRG00000001462	rnaseh2c	99	56.716	ENSCPBG00000023408	-	96	56.716	Chrysemys_picta_bellii
ENSNBRG00000001462	rnaseh2c	100	81.618	ENSCSEG00000005808	rnaseh2c	99	81.618	Cynoglossus_semilaevis
ENSNBRG00000001462	rnaseh2c	100	79.412	ENSCVAG00000006337	rnaseh2c	100	79.412	Cyprinodon_variegatus
ENSNBRG00000001462	rnaseh2c	100	63.971	ENSDARG00000089637	rnaseh2c	99	63.971	Danio_rerio
ENSNBRG00000001462	rnaseh2c	86	48.333	ENSEBUG00000014939	rnaseh2c	77	46.667	Eptatretus_burgeri
ENSNBRG00000001462	rnaseh2c	99	68.889	ENSELUG00000007345	rnaseh2c	97	68.889	Esox_lucius
ENSNBRG00000001462	rnaseh2c	96	79.231	ENSFHEG00000002419	rnaseh2c	95	79.231	Fundulus_heteroclitus
ENSNBRG00000001462	rnaseh2c	65	74.157	ENSGMOG00000008727	rnaseh2c	99	74.157	Gadus_morhua
ENSNBRG00000001462	rnaseh2c	100	80.147	ENSGAFG00000016755	rnaseh2c	83	80.147	Gambusia_affinis
ENSNBRG00000001462	rnaseh2c	99	56.716	ENSGAGG00000008193	-	96	56.716	Gopherus_agassizii
ENSNBRG00000001462	rnaseh2c	100	100.000	ENSHBUG00000012806	rnaseh2c	100	100.000	Haplochromis_burtoni
ENSNBRG00000001462	rnaseh2c	100	75.000	ENSHCOG00000007177	rnaseh2c	100	75.000	Hippocampus_comes
ENSNBRG00000001462	rnaseh2c	100	64.706	ENSIPUG00000018044	rnaseh2c	100	64.706	Ictalurus_punctatus
ENSNBRG00000001462	rnaseh2c	100	79.412	ENSKMAG00000004184	rnaseh2c	100	79.412	Kryptolebias_marmoratus
ENSNBRG00000001462	rnaseh2c	100	81.752	ENSLBEG00000005742	rnaseh2c	100	81.752	Labrus_bergylta
ENSNBRG00000001462	rnaseh2c	95	58.140	ENSLACG00000010120	-	93	58.333	Latimeria_chalumnae
ENSNBRG00000001462	rnaseh2c	100	80.882	ENSMAMG00000021610	rnaseh2c	100	80.882	Mastacembelus_armatus
ENSNBRG00000001462	rnaseh2c	100	98.529	ENSMZEG00005004796	rnaseh2c	100	98.529	Maylandia_zebra
ENSNBRG00000001462	rnaseh2c	100	83.088	ENSMMOG00000002869	rnaseh2c	100	83.088	Mola_mola
ENSNBRG00000001462	rnaseh2c	100	82.482	ENSMALG00000012198	rnaseh2c	100	82.482	Monopterus_albus
ENSNBRG00000001462	rnaseh2c	100	99.265	ENSONIG00000005338	rnaseh2c	99	99.265	Oreochromis_niloticus
ENSNBRG00000001462	rnaseh2c	100	76.471	ENSORLG00000023473	rnaseh2c	100	76.471	Oryzias_latipes
ENSNBRG00000001462	rnaseh2c	100	76.471	ENSORLG00020019053	rnaseh2c	91	76.471	Oryzias_latipes_hni
ENSNBRG00000001462	rnaseh2c	100	76.471	ENSORLG00015017067	rnaseh2c	91	76.471	Oryzias_latipes_hsok
ENSNBRG00000001462	rnaseh2c	100	75.735	ENSOMEG00000018607	rnaseh2c	100	75.735	Oryzias_melastigma
ENSNBRG00000001462	rnaseh2c	100	59.559	ENSPKIG00000019331	rnaseh2c	100	59.559	Paramormyrops_kingsleyae
ENSNBRG00000001462	rnaseh2c	100	76.471	ENSPFOG00000009415	rnaseh2c	100	76.471	Poecilia_formosa
ENSNBRG00000001462	rnaseh2c	100	77.206	ENSPLAG00000023330	rnaseh2c	100	77.206	Poecilia_latipinna
ENSNBRG00000001462	rnaseh2c	100	77.206	ENSPMEG00000003696	rnaseh2c	100	77.206	Poecilia_mexicana
ENSNBRG00000001462	rnaseh2c	100	72.109	ENSPREG00000015384	rnaseh2c	73	72.109	Poecilia_reticulata
ENSNBRG00000001462	rnaseh2c	100	100.000	ENSPNYG00000014766	rnaseh2c	100	100.000	Pundamilia_nyererei
ENSNBRG00000001462	rnaseh2c	99	62.963	ENSPNAG00000019111	rnaseh2c	99	62.963	Pygocentrus_nattereri
ENSNBRG00000001462	rnaseh2c	99	68.148	ENSSFOG00015005760	rnaseh2c	99	68.148	Scleropages_formosus
ENSNBRG00000001462	rnaseh2c	100	85.294	ENSSMAG00000017738	rnaseh2c	100	85.294	Scophthalmus_maximus
ENSNBRG00000001462	rnaseh2c	100	85.294	ENSSDUG00000017285	rnaseh2c	100	85.294	Seriola_dumerili
ENSNBRG00000001462	rnaseh2c	100	86.765	ENSSLDG00000016030	rnaseh2c	100	86.765	Seriola_lalandi_dorsalis
ENSNBRG00000001462	rnaseh2c	94	52.672	ENSSPUG00000000842	-	87	52.273	Sphenodon_punctatus
ENSNBRG00000001462	rnaseh2c	100	86.765	ENSSPAG00000007536	rnaseh2c	100	86.765	Stegastes_partitus
ENSNBRG00000001462	rnaseh2c	100	75.000	ENSTRUG00000021845	rnaseh2c	100	75.000	Takifugu_rubripes
ENSNBRG00000001462	rnaseh2c	100	79.412	ENSTNIG00000000431	rnaseh2c	100	79.412	Tetraodon_nigroviridis
ENSNBRG00000001462	rnaseh2c	99	51.493	ENSXETG00000032466	-	98	51.493	Xenopus_tropicalis
ENSNBRG00000001462	rnaseh2c	100	77.206	ENSXCOG00000001611	rnaseh2c	100	77.206	Xiphophorus_couchianus
ENSNBRG00000001462	rnaseh2c	100	79.412	ENSXMAG00000003147	rnaseh2c	83	79.412	Xiphophorus_maculatus