EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001531 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 1843 bases
Position: chrJH422377.1:1716635-1718477
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001851	XRN_N	PF03159.18	3.6e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001928	-	852	-	ENSNBRP00000001851	104 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000001531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001531	-	100	55.769	ENSNBRG00000008062	xrn2	97	55.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001531	-	100	95.192	ENSG00000114127	XRN1	97	95.192	Homo_sapiens
ENSNBRG00000001531	-	99	97.087	ENSAMXG00000019370	xrn1	95	97.087	Astyanax_mexicanus
ENSNBRG00000001531	-	99	95.146	ENSCPOG00000035199	-	100	95.146	Cavia_porcellus
ENSNBRG00000001531	-	99	99.029	ENSCSEG00000021285	xrn1	93	99.029	Cynoglossus_semilaevis
ENSNBRG00000001531	-	99	94.175	ENSDNOG00000034202	-	100	94.175	Dasypus_novemcinctus
ENSNBRG00000001531	-	99	98.058	ENSFHEG00000017255	-	100	98.058	Fundulus_heteroclitus
ENSNBRG00000001531	-	99	97.087	ENSGAFG00000006293	-	100	97.087	Gambusia_affinis
ENSNBRG00000001531	-	99	99.029	ENSHCOG00000013992	-	90	99.029	Hippocampus_comes
ENSNBRG00000001531	-	100	98.077	ENSLBEG00000018656	xrn1	98	98.077	Labrus_bergylta
ENSNBRG00000001531	-	99	95.146	ENSMAUG00000014268	-	97	95.146	Mesocricetus_auratus
ENSNBRG00000001531	-	100	95.192	ENSMICG00000048948	XRN1	97	95.192	Microcebus_murinus
ENSNBRG00000001531	-	99	95.146	MGP_CAROLIEiJ_G0032535	Xrn1	53	100.000	Mus_caroli
ENSNBRG00000001531	-	99	95.146	ENSMUSG00000032410	Xrn1	53	100.000	Mus_musculus
ENSNBRG00000001531	-	99	95.146	MGP_PahariEiJ_G0015404	Xrn1	53	100.000	Mus_pahari
ENSNBRG00000001531	-	99	95.146	MGP_SPRETEiJ_G0033678	Xrn1	53	100.000	Mus_spretus
ENSNBRG00000001531	-	99	95.146	ENSODEG00000008804	-	100	95.146	Octodon_degus
ENSNBRG00000001531	-	99	99.029	ENSPKIG00000011903	-	79	99.029	Paramormyrops_kingsleyae
ENSNBRG00000001531	-	99	95.146	ENSRROG00000033764	-	100	95.146	Rhinopithecus_roxellana
ENSNBRG00000001531	-	99	95.146	ENSSPUG00000010754	-	100	95.146	Sphenodon_punctatus