EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 41778 bases
Position: chrJH422327.1:617972-659749
Accession: 102784177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000001907	Fox-1_C	PF12414.8	2.2e-26	1	1
ENSNBRP00000001920	Fox-1_C	PF12414.8	2.2e-26	1	1
ENSNBRP00000001907	RRM_1	PF00076.22	1.8e-18	1	1
ENSNBRP00000001920	RRM_1	PF00076.22	2.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000001999	-	2073	XM_006798066	ENSNBRP00000001920	434 (aa)	XP_006798129	-
ENSNBRT00000001985	-	1821	-	ENSNBRP00000001907	385 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000001568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001568	-	74	57.292	ENSNBRG00000010102	rbfox3b	68	57.621
ENSNBRG00000001568	-	68	56.767	ENSNBRG00000022885	-	77	54.874
ENSNBRG00000001568	-	90	73.282	ENSNBRG00000018155	rbfox2	85	73.028

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001568	-	83	54.000	ENSG00000100320	RBFOX2	93	56.842	Homo_sapiens
ENSNBRG00000001568	-	90	94.615	ENSAPOG00000021561	-	84	94.615	Acanthochromis_polyacanthus
ENSNBRG00000001568	-	90	74.046	ENSAPOG00000004877	rbfox2	85	74.046	Acanthochromis_polyacanthus
ENSNBRG00000001568	-	55	65.992	ENSAMEG00000007228	RBFOX2	71	69.163	Ailuropoda_melanoleuca
ENSNBRG00000001568	-	54	97.619	ENSACIG00000022922	-	100	97.619	Amphilophus_citrinellus
ENSNBRG00000001568	-	89	94.087	ENSAOCG00000015358	-	84	93.590	Amphiprion_ocellaris
ENSNBRG00000001568	-	90	73.791	ENSAOCG00000013752	rbfox2	85	74.046	Amphiprion_ocellaris
ENSNBRG00000001568	-	89	94.087	ENSAPEG00000013905	-	84	93.590	Amphiprion_percula
ENSNBRG00000001568	-	90	74.365	ENSAPEG00000022359	rbfox2	93	69.248	Amphiprion_percula
ENSNBRG00000001568	-	89	93.299	ENSATEG00000009959	-	84	93.316	Anabas_testudineus
ENSNBRG00000001568	-	90	74.300	ENSATEG00000021951	rbfox2	85	74.555	Anabas_testudineus
ENSNBRG00000001568	-	68	59.184	ENSAPLG00000007609	RBFOX2	64	62.642	Anas_platyrhynchos
ENSNBRG00000001568	-	81	54.639	ENSACAG00000016535	RBFOX2	80	54.381	Anolis_carolinensis
ENSNBRG00000001568	-	57	65.476	ENSANAG00000015245	RBFOX2	77	65.060	Aotus_nancymaae
ENSNBRG00000001568	-	90	72.589	ENSACLG00000009744	rbfox2	85	72.081	Astatotilapia_calliptera
ENSNBRG00000001568	-	90	99.743	ENSACLG00000017380	-	84	99.743	Astatotilapia_calliptera
ENSNBRG00000001568	-	90	73.350	ENSAMXG00000011451	rbfox2	84	72.704	Astyanax_mexicanus
ENSNBRG00000001568	-	81	54.592	ENSBTAG00000020125	RBFOX2	81	53.964	Bos_taurus
ENSNBRG00000001568	-	68	59.661	ENSCJAG00000038886	-	71	59.184	Callithrix_jacchus
ENSNBRG00000001568	-	80	55.270	ENSCJAG00000019456	-	81	54.731	Callithrix_jacchus
ENSNBRG00000001568	-	68	59.864	ENSCAFG00000001701	RBFOX2	73	59.184	Canis_familiaris
ENSNBRG00000001568	-	68	51.183	ENSCAFG00020004541	RBFOX2	63	54.392	Canis_lupus_dingo
ENSNBRG00000001568	-	81	54.897	ENSCHIG00000014027	RBFOX2	96	51.979	Capra_hircus
ENSNBRG00000001568	-	75	59.062	ENSTSYG00000014123	RBFOX2	83	56.598	Carlito_syrichta
ENSNBRG00000001568	-	68	60.073	ENSCAPG00000014308	RBFOX2	67	59.707	Cavia_aperea
ENSNBRG00000001568	-	68	59.184	ENSCPOG00000022180	RBFOX2	79	55.758	Cavia_porcellus
ENSNBRG00000001568	-	81	55.102	ENSCCAG00000036584	RBFOX2	81	54.847	Cebus_capucinus
ENSNBRG00000001568	-	79	53.067	ENSCATG00000038655	RBFOX2	77	58.689	Cercocebus_atys
ENSNBRG00000001568	-	72	55.491	ENSCLAG00000017106	RBFOX2	81	56.270	Chinchilla_lanigera
ENSNBRG00000001568	-	76	56.486	ENSCSAG00000008110	RBFOX2	96	55.946	Chlorocebus_sabaeus
ENSNBRG00000001568	-	70	59.477	ENSCHOG00000002887	RBFOX2	100	55.917	Choloepus_hoffmanni
ENSNBRG00000001568	-	65	65.217	ENSCPBG00000023144	RBFOX2	77	59.184	Chrysemys_picta_bellii
ENSNBRG00000001568	-	70	59.477	ENSCANG00000035832	RBFOX2	83	57.771	Colobus_angolensis_palliatus
ENSNBRG00000001568	-	81	54.264	ENSCGRG00001017727	Rbfox2	81	54.381	Cricetulus_griseus_chok1gshd
ENSNBRG00000001568	-	68	59.060	ENSCGRG00000014237	Rbfox2	82	55.963	Cricetulus_griseus_crigri
ENSNBRG00000001568	-	90	67.619	ENSCSEG00000007748	rbfox2	86	69.194	Cynoglossus_semilaevis
ENSNBRG00000001568	-	90	92.583	ENSCSEG00000007360	-	83	92.839	Cynoglossus_semilaevis
ENSNBRG00000001568	-	70	79.496	ENSCVAG00000016503	-	74	79.570	Cyprinodon_variegatus
ENSNBRG00000001568	-	68	59.524	ENSDNOG00000004372	RBFOX2	70	59.524	Dasypus_novemcinctus
ENSNBRG00000001568	-	68	60.000	ENSDORG00000015003	Rbfox2	85	52.681	Dipodomys_ordii
ENSNBRG00000001568	-	59	77.612	ENSETEG00000005638	RBFOX2	65	74.627	Echinops_telfairi
ENSNBRG00000001568	-	81	54.897	ENSEASG00005018920	RBFOX2	81	54.639	Equus_asinus_asinus
ENSNBRG00000001568	-	88	51.905	ENSECAG00000018923	RBFOX2	85	54.639	Equus_caballus
ENSNBRG00000001568	-	70	52.493	ENSEEUG00000004549	RBFOX2	86	51.613	Erinaceus_europaeus
ENSNBRG00000001568	-	89	80.256	ENSELUG00000009404	-	80	80.051	Esox_lucius
ENSNBRG00000001568	-	52	78.818	ENSELUG00000000102	rbfox2	75	84.337	Esox_lucius
ENSNBRG00000001568	-	81	53.827	ENSFCAG00000010061	RBFOX2	77	58.224	Felis_catus
ENSNBRG00000001568	-	68	59.524	ENSFALG00000013111	RBFOX2	72	59.184	Ficedula_albicollis
ENSNBRG00000001568	-	65	51.943	ENSFDAG00000006204	RBFOX2	57	66.010	Fukomys_damarensis
ENSNBRG00000001568	-	90	73.924	ENSFHEG00000010546	rbfox2	86	73.924	Fundulus_heteroclitus
ENSNBRG00000001568	-	74	57.878	ENSGMOG00000005278	rbfox2	77	58.199	Gadus_morhua
ENSNBRG00000001568	-	65	57.394	ENSGALG00000012540	RBFOX2	72	57.042	Gallus_gallus
ENSNBRG00000001568	-	57	76.923	ENSGAFG00000017428	-	95	78.543	Gambusia_affinis
ENSNBRG00000001568	-	76	60.303	ENSGACG00000015968	rbfox2	98	63.813	Gasterosteus_aculeatus
ENSNBRG00000001568	-	75	68.167	ENSGACG00000007174	-	81	70.833	Gasterosteus_aculeatus
ENSNBRG00000001568	-	76	61.824	ENSGAGG00000025884	RBFOX2	73	61.486	Gopherus_agassizii
ENSNBRG00000001568	-	81	54.639	ENSGGOG00000037332	RBFOX2	81	54.847	Gorilla_gorilla
ENSNBRG00000001568	-	90	99.743	ENSHBUG00000000856	-	84	99.743	Haplochromis_burtoni
ENSNBRG00000001568	-	90	72.589	ENSHBUG00000004356	rbfox2	85	72.081	Haplochromis_burtoni
ENSNBRG00000001568	-	81	52.030	ENSHGLG00000012907	RBFOX2	82	58.160	Heterocephalus_glaber_female
ENSNBRG00000001568	-	68	59.060	ENSHGLG00100009986	RBFOX2	82	56.575	Heterocephalus_glaber_male
ENSNBRG00000001568	-	90	72.335	ENSHCOG00000016102	rbfox2	85	71.827	Hippocampus_comes
ENSNBRG00000001568	-	90	84.399	ENSHCOG00000005662	-	83	84.910	Hippocampus_comes
ENSNBRG00000001568	-	88	68.895	ENSIPUG00000016896	rbfox2	98	72.607	Ictalurus_punctatus
ENSNBRG00000001568	-	68	56.269	ENSSTOG00000014841	RBFOX2	82	55.963	Ictidomys_tridecemlineatus
ENSNBRG00000001568	-	80	52.713	ENSJJAG00000014885	Rbfox2	83	52.332	Jaculus_jaculus
ENSNBRG00000001568	-	89	89.899	ENSKMAG00000013354	-	82	95.092	Kryptolebias_marmoratus
ENSNBRG00000001568	-	90	71.827	ENSKMAG00000021880	-	85	71.574	Kryptolebias_marmoratus
ENSNBRG00000001568	-	58	57.519	ENSLACG00000003339	RBFOX2	66	57.519	Latimeria_chalumnae
ENSNBRG00000001568	-	78	53.476	ENSLAFG00000027140	RBFOX2	84	53.209	Loxodonta_africana
ENSNBRG00000001568	-	79	53.067	ENSMFAG00000031994	RBFOX2	79	58.160	Macaca_fascicularis
ENSNBRG00000001568	-	70	59.477	ENSMMUG00000014010	RBFOX2	77	59.864	Macaca_mulatta
ENSNBRG00000001568	-	79	52.770	ENSMNEG00000034388	RBFOX2	77	58.689	Macaca_nemestrina
ENSNBRG00000001568	-	70	59.477	ENSMLEG00000005854	RBFOX2	83	57.771	Mandrillus_leucophaeus
ENSNBRG00000001568	-	90	73.671	ENSMAMG00000004293	rbfox2	85	73.924	Mastacembelus_armatus
ENSNBRG00000001568	-	89	86.667	ENSMAMG00000008980	-	84	88.747	Mastacembelus_armatus
ENSNBRG00000001568	-	88	99.211	ENSMZEG00005004959	-	82	99.211	Maylandia_zebra
ENSNBRG00000001568	-	88	71.875	ENSMZEG00005023838	rbfox2	83	71.354	Maylandia_zebra
ENSNBRG00000001568	-	72	56.913	ENSMAUG00000018816	Rbfox2	71	57.193	Mesocricetus_auratus
ENSNBRG00000001568	-	72	47.419	ENSMICG00000046341	-	70	47.183	Microcebus_murinus
ENSNBRG00000001568	-	81	54.592	ENSMICG00000035417	RBFOX2	77	58.361	Microcebus_murinus
ENSNBRG00000001568	-	78	52.785	ENSMOCG00000009327	Rbfox2	81	52.520	Microtus_ochrogaster
ENSNBRG00000001568	-	62	56.835	ENSMMOG00000008287	rbfox2	79	85.366	Mola_mola
ENSNBRG00000001568	-	68	57.792	ENSMODG00000001122	RBFOX2	76	56.678	Monodelphis_domestica
ENSNBRG00000001568	-	81	54.124	MGP_CAROLIEiJ_G0019957	Rbfox2	81	53.866	Mus_caroli
ENSNBRG00000001568	-	81	53.827	ENSMUSG00000033565	Rbfox2	98	54.313	Mus_musculus
ENSNBRG00000001568	-	80	54.286	MGP_PahariEiJ_G0019967	Rbfox2	94	57.396	Mus_pahari
ENSNBRG00000001568	-	81	54.124	MGP_SPRETEiJ_G0020860	Rbfox2	81	53.866	Mus_spretus
ENSNBRG00000001568	-	70	57.771	ENSMPUG00000012555	RBFOX2	80	57.185	Mustela_putorius_furo
ENSNBRG00000001568	-	69	56.765	ENSMLUG00000002676	RBFOX2	81	56.686	Myotis_lucifugus
ENSNBRG00000001568	-	78	52.406	ENSNGAG00000020528	Rbfox2	81	51.958	Nannospalax_galili
ENSNBRG00000001568	-	74	56.267	ENSNLEG00000034979	RBFOX2	83	56.111	Nomascus_leucogenys
ENSNBRG00000001568	-	70	54.252	ENSMEUG00000001547	RBFOX2	83	53.666	Notamacropus_eugenii
ENSNBRG00000001568	-	67	55.369	ENSOPRG00000014878	RBFOX2	62	54.027	Ochotona_princeps
ENSNBRG00000001568	-	81	54.337	ENSODEG00000009937	RBFOX2	81	54.082	Octodon_degus
ENSNBRG00000001568	-	74	82.390	ENSONIG00000008341	-	81	80.422	Oreochromis_niloticus
ENSNBRG00000001568	-	75	64.110	ENSONIG00000017998	rbfox2	83	61.919	Oreochromis_niloticus
ENSNBRG00000001568	-	68	59.596	ENSOANG00000007489	RBFOX2	89	59.259	Ornithorhynchus_anatinus
ENSNBRG00000001568	-	70	51.320	ENSOCUG00000001349	RBFOX2	79	50.733	Oryctolagus_cuniculus
ENSNBRG00000001568	-	90	73.791	ENSORLG00000028082	rbfox2	85	73.282	Oryzias_latipes
ENSNBRG00000001568	-	90	89.514	ENSORLG00000014948	-	84	89.770	Oryzias_latipes
ENSNBRG00000001568	-	90	73.537	ENSORLG00020008976	rbfox2	85	73.028	Oryzias_latipes_hni
ENSNBRG00000001568	-	90	90.026	ENSORLG00020005676	-	84	90.281	Oryzias_latipes_hni
ENSNBRG00000001568	-	90	73.537	ENSORLG00015007027	rbfox2	85	73.028	Oryzias_latipes_hsok
ENSNBRG00000001568	-	90	89.514	ENSORLG00015000797	-	84	89.770	Oryzias_latipes_hsok
ENSNBRG00000001568	-	90	73.537	ENSOMEG00000015966	rbfox2	85	73.028	Oryzias_melastigma
ENSNBRG00000001568	-	90	91.049	ENSOMEG00000007909	-	84	92.583	Oryzias_melastigma
ENSNBRG00000001568	-	68	59.396	ENSOGAG00000033250	RBFOX2	74	58.725	Otolemur_garnettii
ENSNBRG00000001568	-	68	58.923	ENSOARG00000018669	RBFOX2	73	58.249	Ovis_aries
ENSNBRG00000001568	-	70	59.477	ENSPPAG00000035653	RBFOX2	81	57.558	Pan_paniscus
ENSNBRG00000001568	-	81	54.082	ENSPPRG00000015635	RBFOX2	77	58.844	Panthera_pardus
ENSNBRG00000001568	-	70	58.689	ENSPTIG00000019147	RBFOX2	77	58.224	Panthera_tigris_altaica
ENSNBRG00000001568	-	81	54.639	ENSPTRG00000014305	RBFOX2	86	54.870	Pan_troglodytes
ENSNBRG00000001568	-	81	54.897	ENSPANG00000007030	RBFOX2	81	55.102	Papio_anubis
ENSNBRG00000001568	-	90	72.959	ENSPKIG00000006854	-	83	64.031	Paramormyrops_kingsleyae
ENSNBRG00000001568	-	71	58.065	ENSPSIG00000017828	RBFOX2	80	56.213	Pelodiscus_sinensis
ENSNBRG00000001568	-	77	83.612	ENSPMGG00000016969	-	90	83.775	Periophthalmus_magnuspinnatus
ENSNBRG00000001568	-	65	57.544	ENSPEMG00000012542	Rbfox2	71	57.193	Peromyscus_maniculatus_bairdii
ENSNBRG00000001568	-	71	57.478	ENSPCIG00000021550	RBFOX2	77	58.983	Phascolarctos_cinereus
ENSNBRG00000001568	-	64	91.566	ENSPFOG00000001869	-	93	90.000	Poecilia_formosa
ENSNBRG00000001568	-	90	73.350	ENSPFOG00000014209	rbfox2	85	73.096	Poecilia_formosa
ENSNBRG00000001568	-	81	54.639	ENSPPYG00000011766	RBFOX2	81	54.847	Pongo_abelii
ENSNBRG00000001568	-	68	54.762	ENSPCOG00000016273	RBFOX2	73	54.082	Propithecus_coquereli
ENSNBRG00000001568	-	90	73.350	ENSPNYG00000016161	rbfox2	85	73.096	Pundamilia_nyererei
ENSNBRG00000001568	-	95	95.422	ENSPNYG00000020595	-	84	99.487	Pundamilia_nyererei
ENSNBRG00000001568	-	90	65.482	ENSPNAG00000000168	rbfox2	83	65.736	Pygocentrus_nattereri
ENSNBRG00000001568	-	89	56.234	ENSPNAG00000014196	-	83	56.709	Pygocentrus_nattereri
ENSNBRG00000001568	-	68	59.197	ENSRNOG00000004688	Rbfox2	77	55.623	Rattus_norvegicus
ENSNBRG00000001568	-	70	59.344	ENSRBIG00000033696	RBFOX2	74	59.016	Rhinopithecus_bieti
ENSNBRG00000001568	-	81	54.639	ENSRROG00000035715	RBFOX2	81	54.847	Rhinopithecus_roxellana
ENSNBRG00000001568	-	70	59.150	ENSSBOG00000028291	RBFOX2	81	57.692	Saimiri_boliviensis_boliviensis
ENSNBRG00000001568	-	78	55.780	ENSSHAG00000006835	RBFOX2	80	57.101	Sarcophilus_harrisii
ENSNBRG00000001568	-	64	77.959	ENSSFOG00015013291	-	77	78.838	Scleropages_formosus
ENSNBRG00000001568	-	90	64.987	ENSSFOG00015010482	-	79	72.391	Scleropages_formosus
ENSNBRG00000001568	-	88	87.990	ENSSMAG00000004317	-	82	88.512	Scophthalmus_maximus
ENSNBRG00000001568	-	90	72.704	ENSSMAG00000013662	rbfox2	85	73.214	Scophthalmus_maximus
ENSNBRG00000001568	-	89	93.814	ENSSDUG00000009511	-	84	93.830	Seriola_dumerili
ENSNBRG00000001568	-	90	75.064	ENSSDUG00000004292	rbfox2	85	75.064	Seriola_dumerili
ENSNBRG00000001568	-	89	93.299	ENSSLDG00000018052	-	84	93.316	Seriola_lalandi_dorsalis
ENSNBRG00000001568	-	90	74.684	ENSSLDG00000023983	rbfox2	84	75.190	Seriola_lalandi_dorsalis
ENSNBRG00000001568	-	64	58.214	ENSSPUG00000011797	RBFOX2	74	57.857	Sphenodon_punctatus
ENSNBRG00000001568	-	90	93.590	ENSSPAG00000016272	-	84	93.590	Stegastes_partitus
ENSNBRG00000001568	-	90	74.046	ENSSPAG00000013681	rbfox2	85	74.300	Stegastes_partitus
ENSNBRG00000001568	-	80	52.051	ENSSSCG00000000152	RBFOX2	99	51.671	Sus_scrofa
ENSNBRG00000001568	-	68	59.524	ENSTGUG00000010808	RBFOX2	75	59.184	Taeniopygia_guttata
ENSNBRG00000001568	-	71	65.306	ENSTRUG00000007739	-	86	60.534	Takifugu_rubripes
ENSNBRG00000001568	-	70	57.771	ENSTTRG00000006922	RBFOX2	83	57.185	Tursiops_truncatus
ENSNBRG00000001568	-	77	55.319	ENSUAMG00000010612	RBFOX2	84	55.015	Ursus_americanus
ENSNBRG00000001568	-	68	59.322	ENSUMAG00000016785	RBFOX2	74	58.983	Ursus_maritimus
ENSNBRG00000001568	-	70	57.771	ENSVPAG00000002824	RBFOX2	83	57.185	Vicugna_pacos
ENSNBRG00000001568	-	68	62.290	ENSVVUG00000023561	RBFOX2	78	61.616	Vulpes_vulpes
ENSNBRG00000001568	-	69	56.508	ENSXETG00000000231	rbfox2	74	56.508	Xenopus_tropicalis
ENSNBRG00000001568	-	59	84.279	ENSXCOG00000015905	-	71	84.279	Xiphophorus_couchianus
ENSNBRG00000001568	-	75	73.379	ENSXMAG00000029498	rbfox2	73	73.379	Xiphophorus_maculatus
ENSNBRG00000001568	-	90	88.235	ENSXMAG00000026769	-	84	89.258	Xiphophorus_maculatus