EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001624 (Gene tree)
Gene ID: -
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23922 bases
Position: chrJH422537.1:5882-29803
Accession: 102776950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002033	tRNA-synt_1g	PF09334.11	1.9e-05	1	1
ENSNBRP00000002033	Anticodon_1	PF08264.13	1.6e-34	1	1
ENSNBRP00000002033	tRNA-synt_1	PF00133.22	4.7e-89	1	2
ENSNBRP00000002033	tRNA-synt_1	PF00133.22	4.7e-89	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002114	-	3198	XM_006809033	ENSNBRP00000002033	1065 (aa)	XP_006809096	-

Gene Model

Click here to download ENSNBRG00000001624's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001624's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001624	vars2	61	44.780	ENSNBRG00000020520	vars	58	44.780

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001624	vars2	57	72.258	ENSAPOG00000007396	vars2	62	72.258	Acanthochromis_polyacanthus
ENSNBRG00000001624	vars2	57	51.934	ENSAMEG00000012997	VARS2	59	49.862	Ailuropoda_melanoleuca
ENSNBRG00000001624	vars2	61	78.571	ENSACIG00000004344	vars2	67	78.571	Amphilophus_citrinellus
ENSNBRG00000001624	vars2	58	69.231	ENSAOCG00000000476	vars2	63	69.231	Amphiprion_ocellaris
ENSNBRG00000001624	vars2	58	69.231	ENSAPEG00000008646	vars2	62	69.231	Amphiprion_percula
ENSNBRG00000001624	vars2	61	66.298	ENSATEG00000012291	vars2	69	66.298	Anabas_testudineus
ENSNBRG00000001624	vars2	61	51.105	ENSACAG00000022093	VARS2	65	51.105	Anolis_carolinensis
ENSNBRG00000001624	vars2	57	50.276	ENSANAG00000038018	VARS2	60	49.036	Aotus_nancymaae
ENSNBRG00000001624	vars2	63	92.857	ENSACLG00000018673	vars2	67	92.857	Astatotilapia_calliptera
ENSNBRG00000001624	vars2	57	65.374	ENSAMXG00000017773	vars2	67	65.374	Astyanax_mexicanus
ENSNBRG00000001624	vars2	58	52.617	ENSBTAG00000010698	VARS2	61	50.413	Bos_taurus
ENSNBRG00000001624	vars2	57	49.724	ENSCJAG00000019826	VARS2	61	48.485	Callithrix_jacchus
ENSNBRG00000001624	vars2	61	52.762	ENSCAFG00000000454	VARS2	69	52.486	Canis_familiaris
ENSNBRG00000001624	vars2	58	53.444	ENSCHIG00000007847	VARS2	61	51.240	Capra_hircus
ENSNBRG00000001624	vars2	57	50.829	ENSTSYG00000009904	VARS2	60	50.552	Carlito_syrichta
ENSNBRG00000001624	vars2	56	51.176	ENSCAPG00000017770	VARS2	66	51.176	Cavia_aperea
ENSNBRG00000001624	vars2	58	51.657	ENSCPOG00000021834	VARS2	60	51.657	Cavia_porcellus
ENSNBRG00000001624	vars2	57	50.276	ENSCCAG00000037907	VARS2	61	49.036	Cebus_capucinus
ENSNBRG00000001624	vars2	57	50.552	ENSCATG00000032554	VARS2	61	49.311	Cercocebus_atys
ENSNBRG00000001624	vars2	60	51.934	ENSCLAG00000002889	VARS2	64	50.000	Chinchilla_lanigera
ENSNBRG00000001624	vars2	57	50.552	ENSCSAG00000008327	VARS2	60	49.311	Chlorocebus_sabaeus
ENSNBRG00000001624	vars2	57	54.085	ENSCPBG00000021502	VARS2	63	54.085	Chrysemys_picta_bellii
ENSNBRG00000001624	vars2	58	50.689	ENSCANG00000014991	VARS2	60	49.451	Colobus_angolensis_palliatus
ENSNBRG00000001624	vars2	57	50.000	ENSCGRG00001021535	Vars2	61	48.343	Cricetulus_griseus_chok1gshd
ENSNBRG00000001624	vars2	57	50.000	ENSCGRG00000014112	Vars2	61	48.343	Cricetulus_griseus_crigri
ENSNBRG00000001624	vars2	52	62.323	ENSCSEG00000015432	vars2	64	66.087	Cynoglossus_semilaevis
ENSNBRG00000001624	vars2	61	64.088	ENSDARG00000056717	vars2	72	64.088	Danio_rerio
ENSNBRG00000001624	vars2	55	66.492	ENSETEG00000014844	VARS2	53	66.492	Echinops_telfairi
ENSNBRG00000001624	vars2	60	53.039	ENSEASG00005019997	VARS2	66	51.039	Equus_asinus_asinus
ENSNBRG00000001624	vars2	58	53.039	ENSECAG00000018202	VARS2	61	50.964	Equus_caballus
ENSNBRG00000001624	vars2	60	64.088	ENSELUG00000017824	vars2	72	64.088	Esox_lucius
ENSNBRG00000001624	vars2	58	51.657	ENSFCAG00000010531	VARS2	61	51.381	Felis_catus
ENSNBRG00000001624	vars2	61	51.240	ENSFDAG00000017216	VARS2	68	49.311	Fukomys_damarensis
ENSNBRG00000001624	vars2	58	64.088	ENSGMOG00000018960	vars2	75	64.088	Gadus_morhua
ENSNBRG00000001624	vars2	51	62.379	ENSGAFG00000004737	vars2	60	62.379	Gambusia_affinis
ENSNBRG00000001624	vars2	58	69.337	ENSGACG00000001464	vars2	67	69.337	Gasterosteus_aculeatus
ENSNBRG00000001624	vars2	60	52.342	ENSGAGG00000011652	VARS2	73	52.066	Gopherus_agassizii
ENSNBRG00000001624	vars2	57	50.552	ENSGGOG00000014587	VARS2	61	49.311	Gorilla_gorilla
ENSNBRG00000001624	vars2	64	92.857	ENSHBUG00000002448	vars2	75	92.857	Haplochromis_burtoni
ENSNBRG00000001624	vars2	59	51.515	ENSHGLG00000012886	VARS2	59	49.587	Heterocephalus_glaber_female
ENSNBRG00000001624	vars2	59	51.515	ENSHGLG00100016535	VARS2	61	49.587	Heterocephalus_glaber_male
ENSNBRG00000001624	vars2	61	65.193	ENSIPUG00000015573	Vars2	70	65.374	Ictalurus_punctatus
ENSNBRG00000001624	vars2	57	50.552	ENSSTOG00000009924	VARS2	60	48.485	Ictidomys_tridecemlineatus
ENSNBRG00000001624	vars2	57	50.000	ENSJJAG00000011144	Vars2	60	48.343	Jaculus_jaculus
ENSNBRG00000001624	vars2	61	66.851	ENSKMAG00000001393	vars2	72	66.851	Kryptolebias_marmoratus
ENSNBRG00000001624	vars2	61	66.022	ENSLBEG00000011949	vars2	70	66.205	Labrus_bergylta
ENSNBRG00000001624	vars2	57	40.594	ENSLACG00000001576	-	63	40.691	Latimeria_chalumnae
ENSNBRG00000001624	vars2	58	50.538	ENSLAFG00000015183	VARS2	68	47.849	Loxodonta_africana
ENSNBRG00000001624	vars2	57	50.829	ENSMFAG00000042367	VARS2	60	49.587	Macaca_fascicularis
ENSNBRG00000001624	vars2	57	50.829	ENSMMUG00000018609	VARS2	60	49.587	Macaca_mulatta
ENSNBRG00000001624	vars2	57	50.829	ENSMNEG00000043163	VARS2	61	49.587	Macaca_nemestrina
ENSNBRG00000001624	vars2	57	50.552	ENSMLEG00000041728	VARS2	59	49.311	Mandrillus_leucophaeus
ENSNBRG00000001624	vars2	58	69.876	ENSMAMG00000020339	vars2	63	69.876	Mastacembelus_armatus
ENSNBRG00000001624	vars2	63	92.857	ENSMZEG00005017669	vars2	67	92.857	Maylandia_zebra
ENSNBRG00000001624	vars2	57	50.276	ENSMAUG00000018946	Vars2	61	49.448	Mesocricetus_auratus
ENSNBRG00000001624	vars2	60	50.276	ENSMOCG00000014607	Vars2	66	49.448	Microtus_ochrogaster
ENSNBRG00000001624	vars2	61	65.278	ENSMMOG00000012122	vars2	69	65.278	Mola_mola
ENSNBRG00000001624	vars2	57	48.209	ENSMODG00000015848	VARS2	68	48.209	Monodelphis_domestica
ENSNBRG00000001624	vars2	58	69.061	ENSMALG00000009217	vars2	61	80.180	Monopterus_albus
ENSNBRG00000001624	vars2	57	48.760	MGP_CAROLIEiJ_G0021529	Vars2	60	48.209	Mus_caroli
ENSNBRG00000001624	vars2	57	48.485	ENSMUSG00000038838	Vars2	60	47.934	Mus_musculus
ENSNBRG00000001624	vars2	57	48.760	MGP_PahariEiJ_G0020523	Vars2	60	48.209	Mus_pahari
ENSNBRG00000001624	vars2	57	48.209	MGP_SPRETEiJ_G0022436	Vars2	60	48.209	Mus_spretus
ENSNBRG00000001624	vars2	61	52.342	ENSMPUG00000011643	VARS2	67	50.275	Mustela_putorius_furo
ENSNBRG00000001624	vars2	54	51.381	ENSMLUG00000002356	VARS2	55	49.448	Myotis_lucifugus
ENSNBRG00000001624	vars2	60	45.833	ENSNGAG00000020607	Vars2	67	45.833	Nannospalax_galili
ENSNBRG00000001624	vars2	54	51.136	ENSNLEG00000005625	VARS2	57	51.136	Nomascus_leucogenys
ENSNBRG00000001624	vars2	50	49.258	ENSMEUG00000014475	VARS2	61	47.478	Notamacropus_eugenii
ENSNBRG00000001624	vars2	57	51.934	ENSODEG00000017965	VARS2	60	50.000	Octodon_degus
ENSNBRG00000001624	vars2	59	82.133	ENSONIG00000004734	vars2	70	82.133	Oreochromis_niloticus
ENSNBRG00000001624	vars2	58	66.760	ENSORLG00000010632	vars2	62	66.760	Oryzias_latipes
ENSNBRG00000001624	vars2	58	66.480	ENSORLG00020018584	vars2	62	66.480	Oryzias_latipes_hni
ENSNBRG00000001624	vars2	58	66.201	ENSORLG00015010408	vars2	62	66.201	Oryzias_latipes_hsok
ENSNBRG00000001624	vars2	58	67.877	ENSOMEG00000008360	vars2	62	67.877	Oryzias_melastigma
ENSNBRG00000001624	vars2	58	50.959	ENSOGAG00000006087	VARS2	59	50.685	Otolemur_garnettii
ENSNBRG00000001624	vars2	58	53.297	ENSOARG00000010844	VARS2	60	53.297	Ovis_aries
ENSNBRG00000001624	vars2	57	50.276	ENSPPAG00000041141	VARS2	61	49.036	Pan_paniscus
ENSNBRG00000001624	vars2	61	51.381	ENSPPRG00000006751	VARS2	67	51.105	Panthera_pardus
ENSNBRG00000001624	vars2	60	51.381	ENSPTIG00000017799	VARS2	67	51.105	Panthera_tigris_altaica
ENSNBRG00000001624	vars2	57	50.276	ENSPTRG00000034497	VARS2	61	49.036	Pan_troglodytes
ENSNBRG00000001624	vars2	57	50.552	ENSPANG00000018481	VARS2	61	49.311	Papio_anubis
ENSNBRG00000001624	vars2	57	66.298	ENSPKIG00000011372	vars2	61	66.298	Paramormyrops_kingsleyae
ENSNBRG00000001624	vars2	58	65.746	ENSPMGG00000000465	vars2	64	65.746	Periophthalmus_magnuspinnatus
ENSNBRG00000001624	vars2	58	50.276	ENSPEMG00000014691	Vars2	61	49.448	Peromyscus_maniculatus_bairdii
ENSNBRG00000001624	vars2	57	57.566	ENSPCIG00000015040	VARS2	66	57.566	Phascolarctos_cinereus
ENSNBRG00000001624	vars2	58	67.680	ENSPFOG00000017616	vars2	63	67.680	Poecilia_formosa
ENSNBRG00000001624	vars2	58	67.680	ENSPLAG00000019778	vars2	64	67.680	Poecilia_latipinna
ENSNBRG00000001624	vars2	58	67.680	ENSPMEG00000011123	vars2	64	67.680	Poecilia_mexicana
ENSNBRG00000001624	vars2	55	61.644	ENSPREG00000014998	vars2	61	61.644	Poecilia_reticulata
ENSNBRG00000001624	vars2	57	50.552	ENSPPYG00000016424	VARS2	61	49.311	Pongo_abelii
ENSNBRG00000001624	vars2	57	51.657	ENSPCOG00000014839	VARS2	59	51.381	Propithecus_coquereli
ENSNBRG00000001624	vars2	57	51.934	ENSPVAG00000004197	VARS2	60	49.862	Pteropus_vampyrus
ENSNBRG00000001624	vars2	60	78.249	ENSPNYG00000010314	vars2	81	78.249	Pundamilia_nyererei
ENSNBRG00000001624	vars2	57	64.641	ENSPNAG00000026793	vars2	61	64.641	Pygocentrus_nattereri
ENSNBRG00000001624	vars2	58	49.311	ENSRNOG00000000833	Vars2	61	48.485	Rattus_norvegicus
ENSNBRG00000001624	vars2	57	51.105	ENSRBIG00000032725	VARS2	61	49.862	Rhinopithecus_bieti
ENSNBRG00000001624	vars2	57	50.829	ENSRROG00000043847	VARS2	61	49.587	Rhinopithecus_roxellana
ENSNBRG00000001624	vars2	57	50.276	ENSSBOG00000033240	VARS2	58	49.036	Saimiri_boliviensis_boliviensis
ENSNBRG00000001624	vars2	61	49.311	ENSSHAG00000009307	VARS2	69	47.658	Sarcophilus_harrisii
ENSNBRG00000001624	vars2	57	62.707	ENSSFOG00015016187	vars2	71	62.707	Scleropages_formosus
ENSNBRG00000001624	vars2	57	82.623	ENSSMAG00000020842	vars2	59	82.895	Scophthalmus_maximus
ENSNBRG00000001624	vars2	57	73.871	ENSSDUG00000011598	vars2	62	73.871	Seriola_dumerili
ENSNBRG00000001624	vars2	59	70.718	ENSSLDG00000015492	vars2	63	70.914	Seriola_lalandi_dorsalis
ENSNBRG00000001624	vars2	55	68.966	ENSSPAG00000004654	vars2	61	68.966	Stegastes_partitus
ENSNBRG00000001624	vars2	59	53.315	ENSSSCG00000001384	VARS2	61	51.381	Sus_scrofa
ENSNBRG00000001624	vars2	60	66.851	ENSTRUG00000005264	vars2	68	66.851	Takifugu_rubripes
ENSNBRG00000001624	vars2	57	64.384	ENSTNIG00000005916	vars2	61	64.384	Tetraodon_nigroviridis
ENSNBRG00000001624	vars2	57	52.486	ENSUAMG00000026124	VARS2	66	51.368	Ursus_americanus
ENSNBRG00000001624	vars2	60	52.210	ENSUMAG00000019894	VARS2	68	50.138	Ursus_maritimus
ENSNBRG00000001624	vars2	61	52.210	ENSVVUG00000010754	VARS2	67	49.724	Vulpes_vulpes
ENSNBRG00000001624	vars2	56	46.685	ENSXETG00000003036	vars2	71	46.685	Xenopus_tropicalis
ENSNBRG00000001624	vars2	56	65.744	ENSXCOG00000003455	vars2	62	65.744	Xiphophorus_couchianus
ENSNBRG00000001624	vars2	58	66.355	ENSXMAG00000013523	vars2	63	66.355	Xiphophorus_maculatus