EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001747 (Gene tree)
Gene ID: 102793132
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3356 bases
Position: chrJH422476.1:448370-451725
Accession: 102793132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002175	RRM_1	PF00076.22	1.3e-13	1	1
ENSNBRP00000002169	RRM_1	PF00076.22	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002260	-	1669	-	ENSNBRP00000002169	301 (aa)	-	-
ENSNBRT00000002266	-	1591	XM_006807816	ENSNBRP00000002175	275 (aa)	XP_006807879	UPI0003EC2638

Gene Model

Click here to download ENSNBRG00000001747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001747	alyref	100	54.255	ENSNBRG00000017460	-	100	53.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001747	alyref	100	53.405	ENSAPOG00000000183	-	100	51.613	Acanthochromis_polyacanthus
ENSNBRG00000001747	alyref	99	89.706	ENSACIG00000006351	alyref	98	88.686	Amphilophus_citrinellus
ENSNBRG00000001747	alyref	100	51.748	ENSACIG00000020351	-	100	51.748	Amphilophus_citrinellus
ENSNBRG00000001747	alyref	100	94.585	ENSAOCG00000014012	alyref	100	94.585	Amphiprion_ocellaris
ENSNBRG00000001747	alyref	100	51.613	ENSAOCG00000019305	-	100	50.538	Amphiprion_ocellaris
ENSNBRG00000001747	alyref	100	94.585	ENSAPEG00000014603	alyref	100	94.585	Amphiprion_percula
ENSNBRG00000001747	alyref	100	53.430	ENSAPEG00000013527	-	100	50.538	Amphiprion_percula
ENSNBRG00000001747	alyref	100	82.734	ENSATEG00000004307	alyref	100	85.612	Anabas_testudineus
ENSNBRG00000001747	alyref	100	56.071	ENSATEG00000000382	-	100	52.688	Anabas_testudineus
ENSNBRG00000001747	alyref	50	72.340	ENSAPLG00000014745	-	100	70.213	Anas_platyrhynchos
ENSNBRG00000001747	alyref	100	53.521	ENSACLG00000010184	-	100	52.297	Astatotilapia_calliptera
ENSNBRG00000001747	alyref	100	98.545	ENSACLG00000008432	alyref	100	98.545	Astatotilapia_calliptera
ENSNBRG00000001747	alyref	99	75.540	ENSAMXG00000007359	alyref	100	74.021	Astyanax_mexicanus
ENSNBRG00000001747	alyref	99	48.014	ENSCING00000013568	-	99	47.122	Ciona_intestinalis
ENSNBRG00000001747	alyref	99	45.161	ENSCSAVG00000003324	-	99	42.029	Ciona_savignyi
ENSNBRG00000001747	alyref	100	80.866	ENSCSEG00000017800	alyref	100	79.636	Cynoglossus_semilaevis
ENSNBRG00000001747	alyref	100	88.727	ENSCVAG00000014869	alyref	100	80.000	Cyprinodon_variegatus
ENSNBRG00000001747	alyref	100	49.097	ENSCVAG00000007789	-	100	45.907	Cyprinodon_variegatus
ENSNBRG00000001747	alyref	100	78.092	ENSDARG00000077732	alyref	100	73.498	Danio_rerio
ENSNBRG00000001747	alyref	97	46.181	FBgn0010774	Ref1	73	45.238	Drosophila_melanogaster
ENSNBRG00000001747	alyref	99	50.735	ENSEBUG00000008253	alyref	95	50.000	Eptatretus_burgeri
ENSNBRG00000001747	alyref	71	46.305	ENSEBUG00000006305	alyref	100	38.947	Eptatretus_burgeri
ENSNBRG00000001747	alyref	100	71.377	ENSELUG00000017178	alyref	100	67.986	Esox_lucius
ENSNBRG00000001747	alyref	100	70.819	ENSELUG00000008849	-	100	62.278	Esox_lucius
ENSNBRG00000001747	alyref	59	77.019	ENSFALG00000011923	-	96	73.248	Ficedula_albicollis
ENSNBRG00000001747	alyref	100	84.364	ENSFHEG00000019426	alyref	100	80.364	Fundulus_heteroclitus
ENSNBRG00000001747	alyref	100	46.931	ENSFHEG00000004698	-	100	45.487	Fundulus_heteroclitus
ENSNBRG00000001747	alyref	76	100.000	ENSGMOG00000009882	alyref	85	96.000	Gadus_morhua
ENSNBRG00000001747	alyref	69	56.585	ENSGMOG00000013122	-	100	58.854	Gadus_morhua
ENSNBRG00000001747	alyref	100	83.394	ENSGAFG00000006014	alyref	100	76.534	Gambusia_affinis
ENSNBRG00000001747	alyref	100	45.070	ENSGAFG00000007573	-	76	48.500	Gambusia_affinis
ENSNBRG00000001747	alyref	100	98.545	ENSHBUG00000020196	alyref	100	98.545	Haplochromis_burtoni
ENSNBRG00000001747	alyref	100	54.895	ENSHBUG00000001454	-	100	53.004	Haplochromis_burtoni
ENSNBRG00000001747	alyref	98	48.352	ENSHCOG00000012825	-	94	45.556	Hippocampus_comes
ENSNBRG00000001747	alyref	100	74.910	ENSIPUG00000009469	alyref	100	73.477	Ictalurus_punctatus
ENSNBRG00000001747	alyref	75	63.462	ENSSTOG00000016570	-	100	58.373	Ictidomys_tridecemlineatus
ENSNBRG00000001747	alyref	100	51.079	ENSKMAG00000006462	-	100	49.281	Kryptolebias_marmoratus
ENSNBRG00000001747	alyref	100	81.159	ENSKMAG00000008912	alyref	100	81.159	Kryptolebias_marmoratus
ENSNBRG00000001747	alyref	99	48.387	ENSLBEG00000012930	-	99	46.377	Labrus_bergylta
ENSNBRG00000001747	alyref	100	85.252	ENSLBEG00000023118	alyref	90	85.612	Labrus_bergylta
ENSNBRG00000001747	alyref	100	49.831	ENSLBEG00000005387	-	66	53.500	Labrus_bergylta
ENSNBRG00000001747	alyref	77	73.853	ENSLOCG00000013879	alyref	89	69.124	Lepisosteus_oculatus
ENSNBRG00000001747	alyref	100	51.264	ENSMAMG00000005464	-	100	49.104	Mastacembelus_armatus
ENSNBRG00000001747	alyref	100	86.909	ENSMAMG00000003034	alyref	100	84.364	Mastacembelus_armatus
ENSNBRG00000001747	alyref	100	98.545	ENSMZEG00005008639	alyref	100	98.545	Maylandia_zebra
ENSNBRG00000001747	alyref	100	52.817	ENSMZEG00005012096	-	100	51.943	Maylandia_zebra
ENSNBRG00000001747	alyref	99	82.721	ENSMMOG00000012458	alyref	97	77.091	Mola_mola
ENSNBRG00000001747	alyref	99	46.715	ENSMMOG00000007032	-	98	44.097	Mola_mola
ENSNBRG00000001747	alyref	100	51.056	ENSMALG00000006054	-	100	48.043	Monopterus_albus
ENSNBRG00000001747	alyref	100	57.746	ENSMLUG00000006521	-	100	55.986	Myotis_lucifugus
ENSNBRG00000001747	alyref	98	58.088	ENSMLUG00000022178	-	98	52.941	Myotis_lucifugus
ENSNBRG00000001747	alyref	98	54.861	ENSMLUG00000022467	-	98	51.971	Myotis_lucifugus
ENSNBRG00000001747	alyref	98	53.846	ENSMLUG00000009247	-	98	50.916	Myotis_lucifugus
ENSNBRG00000001747	alyref	100	55.254	ENSMLUG00000014372	-	100	56.338	Myotis_lucifugus
ENSNBRG00000001747	alyref	98	55.160	ENSMLUG00000028605	-	98	54.480	Myotis_lucifugus
ENSNBRG00000001747	alyref	98	57.040	ENSMLUG00000030671	-	99	51.957	Myotis_lucifugus
ENSNBRG00000001747	alyref	100	58.451	ENSMLUG00000004098	-	100	55.634	Myotis_lucifugus
ENSNBRG00000001747	alyref	100	68.727	ENSNGAG00000022014	-	100	62.182	Nannospalax_galili
ENSNBRG00000001747	alyref	100	98.921	ENSONIG00000019434	alyref	100	98.921	Oreochromis_niloticus
ENSNBRG00000001747	alyref	100	56.989	ENSONIG00000003296	-	100	55.914	Oreochromis_niloticus
ENSNBRG00000001747	alyref	99	42.633	ENSORLG00000001620	-	88	40.694	Oryzias_latipes
ENSNBRG00000001747	alyref	100	88.000	ENSORLG00020011942	alyref	100	85.818	Oryzias_latipes_hni
ENSNBRG00000001747	alyref	100	48.746	ENSORLG00020015673	-	100	43.581	Oryzias_latipes_hni
ENSNBRG00000001747	alyref	100	86.909	ENSORLG00015022664	alyref	100	83.273	Oryzias_latipes_hsok
ENSNBRG00000001747	alyref	100	48.754	ENSORLG00015015143	-	100	46.595	Oryzias_latipes_hsok
ENSNBRG00000001747	alyref	99	49.817	ENSOMEG00000007158	-	97	44.891	Oryzias_melastigma
ENSNBRG00000001747	alyref	100	88.727	ENSOMEG00000019176	alyref	100	82.909	Oryzias_melastigma
ENSNBRG00000001747	alyref	69	74.737	ENSPPAG00000036403	-	68	69.474	Pan_paniscus
ENSNBRG00000001747	alyref	100	74.275	ENSPKIG00000007070	alyref	100	69.928	Paramormyrops_kingsleyae
ENSNBRG00000001747	alyref	99	70.545	ENSPKIG00000006233	-	81	64.493	Paramormyrops_kingsleyae
ENSNBRG00000001747	alyref	72	47.980	ENSPMGG00000012994	-	97	45.685	Periophthalmus_magnuspinnatus
ENSNBRG00000001747	alyref	99	79.562	ENSPMGG00000016600	alyref	91	76.727	Periophthalmus_magnuspinnatus
ENSNBRG00000001747	alyref	100	64.364	ENSPEMG00000016628	-	79	68.557	Peromyscus_maniculatus_bairdii
ENSNBRG00000001747	alyref	100	81.655	ENSPFOG00000022825	alyref	99	81.295	Poecilia_formosa
ENSNBRG00000001747	alyref	100	46.809	ENSPFOG00000017094	-	100	44.765	Poecilia_formosa
ENSNBRG00000001747	alyref	100	46.809	ENSPLAG00000014380	-	100	44.765	Poecilia_latipinna
ENSNBRG00000001747	alyref	100	81.588	ENSPLAG00000006948	alyref	100	81.588	Poecilia_latipinna
ENSNBRG00000001747	alyref	100	46.809	ENSPMEG00000023039	-	100	44.765	Poecilia_mexicana
ENSNBRG00000001747	alyref	100	81.655	ENSPMEG00000003547	alyref	100	81.295	Poecilia_mexicana
ENSNBRG00000001747	alyref	100	48.201	ENSPREG00000003649	-	100	45.455	Poecilia_reticulata
ENSNBRG00000001747	alyref	100	81.949	ENSPREG00000015795	alyref	100	81.949	Poecilia_reticulata
ENSNBRG00000001747	alyref	99	51.971	ENSPNYG00000002879	-	98	51.079	Pundamilia_nyererei
ENSNBRG00000001747	alyref	100	98.545	ENSPNYG00000017498	alyref	100	98.545	Pundamilia_nyererei
ENSNBRG00000001747	alyref	100	74.820	ENSPNAG00000002531	alyref	100	72.563	Pygocentrus_nattereri
ENSNBRG00000001747	alyref	80	68.584	ENSSBOG00000030924	-	87	68.342	Saimiri_boliviensis_boliviensis
ENSNBRG00000001747	alyref	99	55.872	ENSSHAG00000000609	-	99	53.818	Sarcophilus_harrisii
ENSNBRG00000001747	alyref	99	55.273	ENSSHAG00000012866	-	99	52.364	Sarcophilus_harrisii
ENSNBRG00000001747	alyref	77	77.103	ENSSFOG00015003923	alyref	73	70.561	Scleropages_formosus
ENSNBRG00000001747	alyref	69	76.042	ENSSFOG00015003678	alyref	83	68.750	Scleropages_formosus
ENSNBRG00000001747	alyref	100	49.825	ENSSMAG00000011169	-	100	52.239	Scophthalmus_maximus
ENSNBRG00000001747	alyref	100	82.971	ENSSMAG00000009283	alyref	100	86.232	Scophthalmus_maximus
ENSNBRG00000001747	alyref	100	88.000	ENSSDUG00000016158	alyref	100	84.364	Seriola_dumerili
ENSNBRG00000001747	alyref	100	86.545	ENSSLDG00000017803	alyref	100	84.000	Seriola_lalandi_dorsalis
ENSNBRG00000001747	alyref	99	53.069	ENSSPAG00000017028	-	96	50.725	Stegastes_partitus
ENSNBRG00000001747	alyref	100	48.780	ENSTRUG00000003051	-	100	47.857	Takifugu_rubripes
ENSNBRG00000001747	alyref	100	76.344	ENSTNIG00000011595	alyref	100	73.551	Tetraodon_nigroviridis
ENSNBRG00000001747	alyref	100	50.179	ENSTNIG00000014136	-	100	44.604	Tetraodon_nigroviridis
ENSNBRG00000001747	alyref	71	75.773	ENSVVUG00000000272	-	82	70.984	Vulpes_vulpes
ENSNBRG00000001747	alyref	99	82.482	ENSXCOG00000018047	alyref	99	74.729	Xiphophorus_couchianus
ENSNBRG00000001747	alyref	99	82.482	ENSXMAG00000012218	alyref	99	74.729	Xiphophorus_maculatus
ENSNBRG00000001747	alyref	100	47.857	ENSXMAG00000018086	-	100	45.848	Xiphophorus_maculatus