EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001758 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: trnau1ap|zgc:110606
Full Name: tRNA selenocysteine 1-associated protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 6104 bases
Position: chrJH422537.1:80399-86502
Accession: 102799672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002178	RRM_1	PF00076.22	2.8e-25	1	2
ENSNBRP00000002178	RRM_1	PF00076.22	2.8e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002269	-	867	XM_006809025	ENSNBRP00000002178	288 (aa)	XP_006809088	-

Gene Model

Click here to download ENSNBRG00000001758's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001758's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001758	trnau1apa	52	30.818	ENSNBRG00000009708	pabpc4	71	30.818
ENSNBRG00000001758	trnau1apa	94	41.026	ENSNBRG00000000751	trnau1apb	97	39.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001758	trnau1apa	98	56.997	ENSG00000180098	TRNAU1AP	99	56.997	Homo_sapiens
ENSNBRG00000001758	trnau1apa	99	75.000	ENSAPOG00000007148	TRNAU1AP	100	76.667	Acanthochromis_polyacanthus
ENSNBRG00000001758	trnau1apa	98	57.679	ENSAMEG00000011367	TRNAU1AP	99	57.679	Ailuropoda_melanoleuca
ENSNBRG00000001758	trnau1apa	99	80.656	ENSACIG00000004161	trnau1apa	100	80.656	Amphilophus_citrinellus
ENSNBRG00000001758	trnau1apa	99	76.774	ENSAOCG00000008056	trnau1apa	100	76.774	Amphiprion_ocellaris
ENSNBRG00000001758	trnau1apa	99	76.948	ENSAPEG00000008868	trnau1apa	100	76.948	Amphiprion_percula
ENSNBRG00000001758	trnau1apa	99	72.100	ENSATEG00000012140	trnau1apa	100	71.787	Anabas_testudineus
ENSNBRG00000001758	trnau1apa	92	58.394	ENSAPLG00000002606	TRNAU1AP	98	58.394	Anas_platyrhynchos
ENSNBRG00000001758	trnau1apa	68	39.286	ENSACAG00000004205	-	72	41.327	Anolis_carolinensis
ENSNBRG00000001758	trnau1apa	92	46.853	ENSACAG00000003995	-	96	46.853	Anolis_carolinensis
ENSNBRG00000001758	trnau1apa	98	56.997	ENSANAG00000018976	TRNAU1AP	99	56.997	Aotus_nancymaae
ENSNBRG00000001758	trnau1apa	99	83.333	ENSACLG00000018515	trnau1apa	100	83.333	Astatotilapia_calliptera
ENSNBRG00000001758	trnau1apa	99	49.026	ENSAMXG00000013750	trnau1apa	97	47.826	Astyanax_mexicanus
ENSNBRG00000001758	trnau1apa	92	63.636	ENSAMXG00000029240	-	97	66.216	Astyanax_mexicanus
ENSNBRG00000001758	trnau1apa	98	56.655	ENSBTAG00000010393	TRNAU1AP	99	56.655	Bos_taurus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCJAG00000009717	TRNAU1AP	95	62.500	Callithrix_jacchus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCAFG00000011735	TRNAU1AP	99	56.997	Canis_familiaris
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCAFG00020023584	TRNAU1AP	99	56.997	Canis_lupus_dingo
ENSNBRG00000001758	trnau1apa	99	56.419	ENSCHIG00000023215	TRNAU1AP	100	56.419	Capra_hircus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSTSYG00000003506	TRNAU1AP	95	62.500	Carlito_syrichta
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCPOG00000001925	TRNAU1AP	99	56.997	Cavia_porcellus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCCAG00000037506	TRNAU1AP	95	62.500	Cebus_capucinus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCATG00000044617	TRNAU1AP	95	62.500	Cercocebus_atys
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCLAG00000008223	TRNAU1AP	99	56.997	Chinchilla_lanigera
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCSAG00000001014	TRNAU1AP	99	56.997	Chlorocebus_sabaeus
ENSNBRG00000001758	trnau1apa	94	56.429	ENSCPBG00000000121	TRNAU1AP	99	56.786	Chrysemys_picta_bellii
ENSNBRG00000001758	trnau1apa	53	45.625	ENSCSAVG00000011781	-	84	45.625	Ciona_savignyi
ENSNBRG00000001758	trnau1apa	98	50.175	ENSCANG00000041949	TRNAU1AP	98	54.645	Colobus_angolensis_palliatus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCGRG00001004713	Trnau1ap	99	56.997	Cricetulus_griseus_chok1gshd
ENSNBRG00000001758	trnau1apa	98	56.997	ENSCGRG00000014532	Trnau1ap	99	56.997	Cricetulus_griseus_crigri
ENSNBRG00000001758	trnau1apa	99	66.667	ENSCSEG00000006663	trnau1apa	100	66.984	Cynoglossus_semilaevis
ENSNBRG00000001758	trnau1apa	99	66.129	ENSCVAG00000018069	trnau1apa	99	69.388	Cyprinodon_variegatus
ENSNBRG00000001758	trnau1apa	99	47.368	ENSDARG00000101323	trnau1apa	95	47.541	Danio_rerio
ENSNBRG00000001758	trnau1apa	57	57.558	ENSDNOG00000047959	-	89	57.558	Dasypus_novemcinctus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSDNOG00000033009	TRNAU1AP	99	56.997	Dasypus_novemcinctus
ENSNBRG00000001758	trnau1apa	97	57.093	ENSDORG00000006349	Trnau1ap	98	60.793	Dipodomys_ordii
ENSNBRG00000001758	trnau1apa	93	33.231	FBgn0031607	CG15440	50	45.238	Drosophila_melanogaster
ENSNBRG00000001758	trnau1apa	83	56.452	ENSETEG00000012594	TRNAU1AP	98	56.452	Echinops_telfairi
ENSNBRG00000001758	trnau1apa	63	43.056	ENSEBUG00000006349	-	58	43.056	Eptatretus_burgeri
ENSNBRG00000001758	trnau1apa	98	56.997	ENSEASG00005010062	TRNAU1AP	94	64.474	Equus_asinus_asinus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSECAG00000012980	TRNAU1AP	94	64.474	Equus_caballus
ENSNBRG00000001758	trnau1apa	99	61.755	ENSELUG00000017686	trnau1apa	100	66.221	Esox_lucius
ENSNBRG00000001758	trnau1apa	91	79.167	ENSELUG00000022790	-	96	79.167	Esox_lucius
ENSNBRG00000001758	trnau1apa	98	56.997	ENSFCAG00000013401	TRNAU1AP	99	56.997	Felis_catus
ENSNBRG00000001758	trnau1apa	94	57.143	ENSFALG00000001371	TRNAU1AP	99	57.143	Ficedula_albicollis
ENSNBRG00000001758	trnau1apa	99	56.757	ENSFDAG00000018599	TRNAU1AP	100	56.757	Fukomys_damarensis
ENSNBRG00000001758	trnau1apa	73	75.424	ENSFHEG00000018232	trnau1apa	81	75.431	Fundulus_heteroclitus
ENSNBRG00000001758	trnau1apa	99	60.458	ENSGMOG00000016508	trnau1apa	99	62.092	Gadus_morhua
ENSNBRG00000001758	trnau1apa	69	41.315	ENSGALG00000012721	C2H6orf52	90	39.834	Gallus_gallus
ENSNBRG00000001758	trnau1apa	98	55.973	ENSGALG00000001310	-	99	55.973	Gallus_gallus
ENSNBRG00000001758	trnau1apa	77	74.074	ENSGAFG00000004928	trnau1apa	94	74.597	Gambusia_affinis
ENSNBRG00000001758	trnau1apa	99	74.675	ENSGACG00000001443	trnau1apa	100	74.675	Gasterosteus_aculeatus
ENSNBRG00000001758	trnau1apa	94	56.429	ENSGAGG00000004940	TRNAU1AP	99	56.786	Gopherus_agassizii
ENSNBRG00000001758	trnau1apa	98	56.997	ENSGGOG00000003511	TRNAU1AP	95	62.500	Gorilla_gorilla
ENSNBRG00000001758	trnau1apa	99	81.672	ENSHBUG00000002510	trnau1apa	100	81.672	Haplochromis_burtoni
ENSNBRG00000001758	trnau1apa	98	56.997	ENSHGLG00000010380	TRNAU1AP	99	56.997	Heterocephalus_glaber_female
ENSNBRG00000001758	trnau1apa	92	57.609	ENSHGLG00100012699	TRNAU1AP	94	57.609	Heterocephalus_glaber_male
ENSNBRG00000001758	trnau1apa	99	63.141	ENSHCOG00000014770	trnau1apa	99	61.218	Hippocampus_comes
ENSNBRG00000001758	trnau1apa	98	56.997	ENSSTOG00000000079	TRNAU1AP	99	56.997	Ictidomys_tridecemlineatus
ENSNBRG00000001758	trnau1apa	97	58.478	ENSJJAG00000010128	Trnau1ap	99	56.997	Jaculus_jaculus
ENSNBRG00000001758	trnau1apa	99	70.418	ENSKMAG00000001230	trnau1apa	100	71.704	Kryptolebias_marmoratus
ENSNBRG00000001758	trnau1apa	99	71.338	ENSLBEG00000011683	trnau1apa	100	71.019	Labrus_bergylta
ENSNBRG00000001758	trnau1apa	98	48.110	ENSLACG00000005541	TRNAU1AP	99	47.619	Latimeria_chalumnae
ENSNBRG00000001758	trnau1apa	97	55.290	ENSLOCG00000004041	trnau1apa	98	53.767	Lepisosteus_oculatus
ENSNBRG00000001758	trnau1apa	98	57.338	ENSLAFG00000007628	TRNAU1AP	99	57.338	Loxodonta_africana
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMFAG00000043751	TRNAU1AP	95	62.500	Macaca_fascicularis
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMMUG00000006561	TRNAU1AP	99	56.997	Macaca_mulatta
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMNEG00000044201	TRNAU1AP	95	62.500	Macaca_nemestrina
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMLEG00000015649	TRNAU1AP	95	62.500	Mandrillus_leucophaeus
ENSNBRG00000001758	trnau1apa	99	73.154	ENSMAMG00000001247	trnau1apa	100	72.063	Mastacembelus_armatus
ENSNBRG00000001758	trnau1apa	99	83.333	ENSMZEG00005017722	trnau1apa	100	83.333	Maylandia_zebra
ENSNBRG00000001758	trnau1apa	95	57.042	ENSMGAG00000002105	TRNAU1AP	99	57.042	Meleagris_gallopavo
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMICG00000008386	TRNAU1AP	95	62.500	Microcebus_murinus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMOCG00000011189	Trnau1ap	99	56.997	Microtus_ochrogaster
ENSNBRG00000001758	trnau1apa	99	72.852	ENSMMOG00000012107	trnau1apa	99	72.852	Mola_mola
ENSNBRG00000001758	trnau1apa	98	55.631	ENSMODG00000010927	TRNAU1AP	99	55.631	Monodelphis_domestica
ENSNBRG00000001758	trnau1apa	99	76.471	ENSMALG00000016778	trnau1apa	99	75.433	Monopterus_albus
ENSNBRG00000001758	trnau1apa	98	56.997	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	64.103	Mus_caroli
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMUSG00000028898	Trnau1ap	98	64.103	Mus_musculus
ENSNBRG00000001758	trnau1apa	98	56.997	MGP_PahariEiJ_G0028896	Trnau1ap	98	64.103	Mus_pahari
ENSNBRG00000001758	trnau1apa	98	56.997	MGP_SPRETEiJ_G0027544	Trnau1ap	98	64.103	Mus_spretus
ENSNBRG00000001758	trnau1apa	99	57.095	ENSMPUG00000015511	TRNAU1AP	100	57.095	Mustela_putorius_furo
ENSNBRG00000001758	trnau1apa	98	56.997	ENSMLUG00000012586	TRNAU1AP	99	56.997	Myotis_lucifugus
ENSNBRG00000001758	trnau1apa	98	56.655	ENSNGAG00000015881	Trnau1ap	99	56.655	Nannospalax_galili
ENSNBRG00000001758	trnau1apa	98	57.338	ENSNLEG00000009822	TRNAU1AP	95	62.500	Nomascus_leucogenys
ENSNBRG00000001758	trnau1apa	95	56.338	ENSMEUG00000006117	TRNAU1AP	99	56.338	Notamacropus_eugenii
ENSNBRG00000001758	trnau1apa	58	57.692	ENSOPRG00000007084	-	55	57.692	Ochotona_princeps
ENSNBRG00000001758	trnau1apa	98	56.997	ENSODEG00000002970	TRNAU1AP	99	56.997	Octodon_degus
ENSNBRG00000001758	trnau1apa	79	82.591	ENSONIG00000004715	trnau1apa	98	82.591	Oreochromis_niloticus
ENSNBRG00000001758	trnau1apa	97	44.876	ENSOANG00000005325	-	97	44.876	Ornithorhynchus_anatinus
ENSNBRG00000001758	trnau1apa	98	55.973	ENSOCUG00000011704	-	99	55.973	Oryctolagus_cuniculus
ENSNBRG00000001758	trnau1apa	98	46.667	ENSOCUG00000002353	-	99	46.939	Oryctolagus_cuniculus
ENSNBRG00000001758	trnau1apa	75	49.561	ENSOCUG00000006834	-	89	49.339	Oryctolagus_cuniculus
ENSNBRG00000001758	trnau1apa	99	72.054	ENSORLG00000010428	trnau1apa	100	72.054	Oryzias_latipes
ENSNBRG00000001758	trnau1apa	99	69.032	ENSORLG00020000926	trnau1ap	100	69.032	Oryzias_latipes_hni
ENSNBRG00000001758	trnau1apa	99	69.032	ENSORLG00015009858	trnau1ap	100	69.032	Oryzias_latipes_hsok
ENSNBRG00000001758	trnau1apa	99	69.032	ENSOMEG00000007873	trnau1apa	100	68.710	Oryzias_melastigma
ENSNBRG00000001758	trnau1apa	98	56.997	ENSOGAG00000002274	TRNAU1AP	99	56.997	Otolemur_garnettii
ENSNBRG00000001758	trnau1apa	99	56.419	ENSOARG00000002843	TRNAU1AP	100	56.419	Ovis_aries
ENSNBRG00000001758	trnau1apa	98	57.143	ENSPPAG00000033927	TRNAU1AP	95	62.500	Pan_paniscus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSPPRG00000004416	TRNAU1AP	99	56.997	Panthera_pardus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSPTIG00000016677	TRNAU1AP	99	56.997	Panthera_tigris_altaica
ENSNBRG00000001758	trnau1apa	90	52.632	ENSPTRG00000000434	-	94	52.632	Pan_troglodytes
ENSNBRG00000001758	trnau1apa	98	56.997	ENSPANG00000016019	TRNAU1AP	95	62.500	Papio_anubis
ENSNBRG00000001758	trnau1apa	97	51.667	ENSPKIG00000015511	trnau1apa	96	51.667	Paramormyrops_kingsleyae
ENSNBRG00000001758	trnau1apa	90	75.676	ENSPKIG00000022205	-	95	75.676	Paramormyrops_kingsleyae
ENSNBRG00000001758	trnau1apa	94	56.786	ENSPSIG00000006864	TRNAU1AP	99	56.786	Pelodiscus_sinensis
ENSNBRG00000001758	trnau1apa	99	67.119	ENSPMGG00000023893	trnau1apa	98	66.780	Periophthalmus_magnuspinnatus
ENSNBRG00000001758	trnau1apa	98	56.655	ENSPEMG00000007877	Trnau1ap	99	56.655	Peromyscus_maniculatus_bairdii
ENSNBRG00000001758	trnau1apa	56	51.977	ENSPMAG00000000592	trnau1apa	95	51.977	Petromyzon_marinus
ENSNBRG00000001758	trnau1apa	72	50.459	ENSPMAG00000005934	trnau1apa	96	49.309	Petromyzon_marinus
ENSNBRG00000001758	trnau1apa	99	68.932	ENSPFOG00000008100	trnau1apa	99	70.227	Poecilia_formosa
ENSNBRG00000001758	trnau1apa	95	70.034	ENSPLAG00000010236	trnau1apa	99	71.380	Poecilia_latipinna
ENSNBRG00000001758	trnau1apa	96	74.205	ENSPMEG00000016387	trnau1apa	95	74.558	Poecilia_mexicana
ENSNBRG00000001758	trnau1apa	84	84.000	ENSPREG00000019821	trnau1apa	96	84.000	Poecilia_reticulata
ENSNBRG00000001758	trnau1apa	88	49.242	ENSPPYG00000001639	-	99	49.242	Pongo_abelii
ENSNBRG00000001758	trnau1apa	98	56.997	ENSPCOG00000027712	-	99	56.997	Propithecus_coquereli
ENSNBRG00000001758	trnau1apa	95	47.163	ENSPCOG00000023470	-	98	46.809	Propithecus_coquereli
ENSNBRG00000001758	trnau1apa	98	56.997	ENSPVAG00000017214	TRNAU1AP	99	56.997	Pteropus_vampyrus
ENSNBRG00000001758	trnau1apa	99	81.994	ENSPNYG00000010130	trnau1apa	100	81.994	Pundamilia_nyererei
ENSNBRG00000001758	trnau1apa	99	48.649	ENSPNAG00000024905	trnau1apa	97	48.311	Pygocentrus_nattereri
ENSNBRG00000001758	trnau1apa	75	60.793	ENSRNOG00000055344	Trnau1ap	77	60.793	Rattus_norvegicus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSRBIG00000029083	TRNAU1AP	95	62.500	Rhinopithecus_bieti
ENSNBRG00000001758	trnau1apa	98	56.997	ENSRROG00000029128	TRNAU1AP	95	62.500	Rhinopithecus_roxellana
ENSNBRG00000001758	trnau1apa	98	56.997	ENSSBOG00000021299	TRNAU1AP	95	62.500	Saimiri_boliviensis_boliviensis
ENSNBRG00000001758	trnau1apa	98	55.631	ENSSHAG00000008108	TRNAU1AP	99	55.631	Sarcophilus_harrisii
ENSNBRG00000001758	trnau1apa	99	68.153	ENSSMAG00000020851	trnau1apa	100	71.019	Scophthalmus_maximus
ENSNBRG00000001758	trnau1apa	99	71.746	ENSSDUG00000011734	trnau1apa	100	71.746	Seriola_dumerili
ENSNBRG00000001758	trnau1apa	99	64.527	ENSSLDG00000012101	trnau1apa	99	64.527	Seriola_lalandi_dorsalis
ENSNBRG00000001758	trnau1apa	95	58.099	ENSSARG00000007536	TRNAU1AP	99	58.099	Sorex_araneus
ENSNBRG00000001758	trnau1apa	63	51.337	ENSSPUG00000010415	-	99	49.727	Sphenodon_punctatus
ENSNBRG00000001758	trnau1apa	98	52.901	ENSSPUG00000010400	-	99	52.901	Sphenodon_punctatus
ENSNBRG00000001758	trnau1apa	99	75.884	ENSSPAG00000005029	trnau1apa	100	75.884	Stegastes_partitus
ENSNBRG00000001758	trnau1apa	98	57.388	ENSSSCG00000030284	TRNAU1AP	99	56.997	Sus_scrofa
ENSNBRG00000001758	trnau1apa	95	57.394	ENSTGUG00000000735	-	99	57.394	Taeniopygia_guttata
ENSNBRG00000001758	trnau1apa	69	43.284	ENSTGUG00000005908	-	99	43.284	Taeniopygia_guttata
ENSNBRG00000001758	trnau1apa	99	70.968	ENSTRUG00000003352	trnau1apa	100	69.032	Takifugu_rubripes
ENSNBRG00000001758	trnau1apa	99	66.667	ENSTNIG00000006129	trnau1apa	100	66.667	Tetraodon_nigroviridis
ENSNBRG00000001758	trnau1apa	83	54.435	ENSTBEG00000008049	-	98	54.435	Tupaia_belangeri
ENSNBRG00000001758	trnau1apa	98	56.997	ENSTTRG00000001854	TRNAU1AP	99	56.997	Tursiops_truncatus
ENSNBRG00000001758	trnau1apa	94	57.857	ENSUAMG00000008789	TRNAU1AP	99	57.857	Ursus_americanus
ENSNBRG00000001758	trnau1apa	98	56.997	ENSUMAG00000011068	TRNAU1AP	99	56.997	Ursus_maritimus
ENSNBRG00000001758	trnau1apa	83	57.258	ENSVPAG00000006778	TRNAU1AP	82	57.258	Vicugna_pacos
ENSNBRG00000001758	trnau1apa	97	57.785	ENSVVUG00000012518	TRNAU1AP	91	57.785	Vulpes_vulpes
ENSNBRG00000001758	trnau1apa	99	69.256	ENSXMAG00000017361	trnau1apa	99	70.550	Xiphophorus_maculatus