EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001829 (Gene tree)
Gene ID: 102781076
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: sal-like protein 4-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5542 bases
Position: chrJH422304.1:1210154-1215695
Accession: 102781076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	1	6
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	2	6
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	3	6
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	4	6
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	5	6
ENSNBRP00000002282	zf-C2H2	PF00096.26	1.3e-32	6	6
ENSNBRP00000002282	zf-met	PF12874.7	7.3e-16	1	2
ENSNBRP00000002282	zf-met	PF12874.7	7.3e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002373	-	3246	XM_006794010	ENSNBRP00000002282	1081 (aa)	XP_006794073	UPI0003EC0B66

Gene Model

Click here to download ENSNBRG00000001829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001829	sall4	54	36.145	ENSNBRG00000003250	-	84	50.000
ENSNBRG00000001829	sall4	52	55.102	ENSNBRG00000003124	-	87	55.000
ENSNBRG00000001829	sall4	57	52.830	ENSNBRG00000002902	-	97	54.000
ENSNBRG00000001829	sall4	52	42.593	ENSNBRG00000004557	-	68	42.593
ENSNBRG00000001829	sall4	54	52.830	ENSNBRG00000014088	-	99	52.830
ENSNBRG00000001829	sall4	85	62.745	ENSNBRG00000008974	sall3a	70	43.545
ENSNBRG00000001829	sall4	59	41.176	ENSNBRG00000016603	-	87	47.170
ENSNBRG00000001829	sall4	60	44.444	ENSNBRG00000008106	-	79	44.444
ENSNBRG00000001829	sall4	68	53.061	ENSNBRG00000009075	znf236	81	53.061
ENSNBRG00000001829	sall4	56	55.102	ENSNBRG00000021237	-	79	55.102
ENSNBRG00000001829	sall4	62	48.000	ENSNBRG00000004523	-	83	48.000
ENSNBRG00000001829	sall4	57	56.604	ENSNBRG00000016577	si:dkey-182i3.9	88	56.604
ENSNBRG00000001829	sall4	72	65.385	ENSNBRG00000016034	sall3b	97	65.385
ENSNBRG00000001829	sall4	100	60.000	ENSNBRG00000009307	sall1a	100	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001829	sall4	100	43.849	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSNBRG00000001829	sall4	100	80.663	ENSAPOG00000002465	sall4	100	80.755	Acanthochromis_polyacanthus
ENSNBRG00000001829	sall4	100	44.232	ENSAMEG00000013250	-	99	45.712	Ailuropoda_melanoleuca
ENSNBRG00000001829	sall4	100	88.643	ENSACIG00000017298	sall4	100	88.643	Amphilophus_citrinellus
ENSNBRG00000001829	sall4	100	81.215	ENSAOCG00000023678	sall4	100	81.308	Amphiprion_ocellaris
ENSNBRG00000001829	sall4	100	81.215	ENSAPEG00000000751	sall4	100	81.308	Amphiprion_percula
ENSNBRG00000001829	sall4	100	80.349	ENSATEG00000024480	sall4	100	80.349	Anabas_testudineus
ENSNBRG00000001829	sall4	99	52.682	ENSAPLG00000006498	SALL4	100	52.812	Anas_platyrhynchos
ENSNBRG00000001829	sall4	100	51.354	ENSACAG00000012748	SALL4	100	51.829	Anolis_carolinensis
ENSNBRG00000001829	sall4	100	44.038	ENSANAG00000023352	SALL4	86	67.308	Aotus_nancymaae
ENSNBRG00000001829	sall4	100	97.874	ENSACLG00000017851	sall4	100	97.874	Astatotilapia_calliptera
ENSNBRG00000001829	sall4	99	63.342	ENSAMXG00000001254	sall4	99	63.971	Astyanax_mexicanus
ENSNBRG00000001829	sall4	100	42.055	ENSBTAG00000003101	SALL4	100	41.983	Bos_taurus
ENSNBRG00000001829	sall4	80	46.393	ENSCJAG00000000591	SALL4	97	46.393	Callithrix_jacchus
ENSNBRG00000001829	sall4	100	43.739	ENSCAFG00000011738	-	100	44.031	Canis_familiaris
ENSNBRG00000001829	sall4	100	43.777	ENSCAFG00020021870	SALL4	100	44.069	Canis_lupus_dingo
ENSNBRG00000001829	sall4	100	41.474	ENSCHIG00000026270	SALL4	100	41.983	Capra_hircus
ENSNBRG00000001829	sall4	100	42.435	ENSTSYG00000007359	SALL4	100	61.538	Carlito_syrichta
ENSNBRG00000001829	sall4	98	42.740	ENSCAPG00000012135	SALL4	96	42.935	Cavia_aperea
ENSNBRG00000001829	sall4	100	40.386	ENSCCAG00000029512	-	100	58.824	Cebus_capucinus
ENSNBRG00000001829	sall4	100	43.849	ENSCATG00000030757	SALL4	86	67.308	Cercocebus_atys
ENSNBRG00000001829	sall4	100	43.293	ENSCLAG00000010479	SALL4	86	65.385	Chinchilla_lanigera
ENSNBRG00000001829	sall4	100	43.144	ENSCSAG00000015269	SALL4	100	43.354	Chlorocebus_sabaeus
ENSNBRG00000001829	sall4	99	52.212	ENSCPBG00000014995	SALL4	99	52.530	Chrysemys_picta_bellii
ENSNBRG00000001829	sall4	100	43.673	ENSCANG00000036463	SALL4	100	43.881	Colobus_angolensis_palliatus
ENSNBRG00000001829	sall4	100	41.536	ENSCGRG00001019569	Sall4	100	56.863	Cricetulus_griseus_chok1gshd
ENSNBRG00000001829	sall4	100	41.361	ENSCGRG00000000462	Sall4	97	75.309	Cricetulus_griseus_crigri
ENSNBRG00000001829	sall4	100	76.073	ENSCSEG00000014604	sall4	100	76.621	Cynoglossus_semilaevis
ENSNBRG00000001829	sall4	100	76.888	ENSCVAG00000010815	sall4	100	76.427	Cyprinodon_variegatus
ENSNBRG00000001829	sall4	99	62.919	ENSDARG00000044485	sall4	99	63.101	Danio_rerio
ENSNBRG00000001829	sall4	100	43.766	ENSDNOG00000040633	SALL4	100	43.896	Dasypus_novemcinctus
ENSNBRG00000001829	sall4	100	42.260	ENSDORG00000012841	Sall4	100	75.676	Dipodomys_ordii
ENSNBRG00000001829	sall4	60	65.385	ENSETEG00000012475	-	51	65.385	Echinops_telfairi
ENSNBRG00000001829	sall4	100	43.599	ENSECAG00000018533	SALL4	100	43.614	Equus_caballus
ENSNBRG00000001829	sall4	100	43.530	ENSEEUG00000003649	SALL4	99	42.427	Erinaceus_europaeus
ENSNBRG00000001829	sall4	100	64.476	ENSELUG00000005696	sall4	100	64.476	Esox_lucius
ENSNBRG00000001829	sall4	100	43.550	ENSFCAG00000002822	SALL4	77	67.308	Felis_catus
ENSNBRG00000001829	sall4	100	51.226	ENSFALG00000013149	SALL4	100	51.926	Ficedula_albicollis
ENSNBRG00000001829	sall4	100	42.341	ENSFDAG00000017812	SALL4	82	63.462	Fukomys_damarensis
ENSNBRG00000001829	sall4	100	76.287	ENSFHEG00000014187	sall4	100	75.827	Fundulus_heteroclitus
ENSNBRG00000001829	sall4	100	68.739	ENSGMOG00000003822	sall4	100	68.739	Gadus_morhua
ENSNBRG00000001829	sall4	100	52.734	ENSGALG00000041365	SALL4	100	53.269	Gallus_gallus
ENSNBRG00000001829	sall4	100	77.001	ENSGAFG00000019925	sall4	100	76.541	Gambusia_affinis
ENSNBRG00000001829	sall4	100	74.429	ENSGACG00000011124	sall4	100	74.429	Gasterosteus_aculeatus
ENSNBRG00000001829	sall4	99	52.028	ENSGAGG00000002297	SALL4	99	52.343	Gopherus_agassizii
ENSNBRG00000001829	sall4	100	43.673	ENSGGOG00000001832	SALL4	85	67.308	Gorilla_gorilla
ENSNBRG00000001829	sall4	100	98.059	ENSHBUG00000007327	sall4	100	98.059	Haplochromis_burtoni
ENSNBRG00000001829	sall4	98	43.141	ENSHGLG00000009043	SALL4	96	42.716	Heterocephalus_glaber_female
ENSNBRG00000001829	sall4	98	43.141	ENSHGLG00100002722	SALL4	96	42.716	Heterocephalus_glaber_male
ENSNBRG00000001829	sall4	100	76.330	ENSHCOG00000008519	sall4	100	76.330	Hippocampus_comes
ENSNBRG00000001829	sall4	99	63.579	ENSIPUG00000019170	sall4	99	63.760	Ictalurus_punctatus
ENSNBRG00000001829	sall4	66	59.615	ENSSTOG00000025002	SALL4	97	80.282	Ictidomys_tridecemlineatus
ENSNBRG00000001829	sall4	100	43.278	ENSJJAG00000020688	Sall4	97	81.690	Jaculus_jaculus
ENSNBRG00000001829	sall4	100	79.006	ENSKMAG00000002501	sall4	100	79.006	Kryptolebias_marmoratus
ENSNBRG00000001829	sall4	100	78.185	ENSLBEG00000019951	sall4	100	78.185	Labrus_bergylta
ENSNBRG00000001829	sall4	96	48.257	ENSLACG00000013898	SALL4	99	62.921	Latimeria_chalumnae
ENSNBRG00000001829	sall4	100	61.296	ENSLOCG00000002427	sall4	100	61.476	Lepisosteus_oculatus
ENSNBRG00000001829	sall4	100	43.810	ENSLAFG00000004309	SALL4	100	44.249	Loxodonta_africana
ENSNBRG00000001829	sall4	100	43.849	ENSMFAG00000027169	SALL4	100	44.056	Macaca_fascicularis
ENSNBRG00000001829	sall4	87	45.605	ENSMMUG00000003870	SALL4	100	59.615	Macaca_mulatta
ENSNBRG00000001829	sall4	87	45.605	ENSMNEG00000035995	SALL4	86	67.308	Macaca_nemestrina
ENSNBRG00000001829	sall4	100	43.937	ENSMLEG00000030467	SALL4	100	44.143	Mandrillus_leucophaeus
ENSNBRG00000001829	sall4	100	79.727	ENSMAMG00000005223	sall4	100	79.818	Mastacembelus_armatus
ENSNBRG00000001829	sall4	100	97.782	ENSMZEG00005023418	sall4	100	97.782	Maylandia_zebra
ENSNBRG00000001829	sall4	75	64.706	ENSMGAG00000009344	SALL4	100	64.706	Meleagris_gallopavo
ENSNBRG00000001829	sall4	100	40.636	ENSMAUG00000015814	Sall4	97	72.289	Mesocricetus_auratus
ENSNBRG00000001829	sall4	100	43.799	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSNBRG00000001829	sall4	100	42.646	ENSMOCG00000018245	Sall4	97	79.452	Microtus_ochrogaster
ENSNBRG00000001829	sall4	100	78.309	ENSMMOG00000014929	sall4	100	78.676	Mola_mola
ENSNBRG00000001829	sall4	99	48.126	ENSMODG00000016387	SALL4	97	47.871	Monodelphis_domestica
ENSNBRG00000001829	sall4	100	80.900	ENSMALG00000018709	sall4	100	81.107	Monopterus_albus
ENSNBRG00000001829	sall4	100	41.952	MGP_CAROLIEiJ_G0024723	Sall4	97	81.944	Mus_caroli
ENSNBRG00000001829	sall4	100	41.902	ENSMUSG00000027547	Sall4	97	81.944	Mus_musculus
ENSNBRG00000001829	sall4	100	40.763	MGP_PahariEiJ_G0026164	Sall4	97	81.944	Mus_pahari
ENSNBRG00000001829	sall4	100	41.902	MGP_SPRETEiJ_G0025643	Sall4	97	81.944	Mus_spretus
ENSNBRG00000001829	sall4	100	43.941	ENSMPUG00000017543	SALL4	96	43.837	Mustela_putorius_furo
ENSNBRG00000001829	sall4	97	43.554	ENSMLUG00000007060	-	98	43.554	Myotis_lucifugus
ENSNBRG00000001829	sall4	100	41.156	ENSMLUG00000008405	-	100	40.502	Myotis_lucifugus
ENSNBRG00000001829	sall4	99	33.969	ENSMLUG00000028073	-	99	34.002	Myotis_lucifugus
ENSNBRG00000001829	sall4	100	42.808	ENSNGAG00000017833	Sall4	88	67.308	Nannospalax_galili
ENSNBRG00000001829	sall4	100	43.585	ENSNLEG00000007013	SALL4	100	43.794	Nomascus_leucogenys
ENSNBRG00000001829	sall4	84	53.333	ENSMEUG00000005793	-	99	53.333	Notamacropus_eugenii
ENSNBRG00000001829	sall4	100	43.837	ENSOPRG00000011640	SALL4	100	43.924	Ochotona_princeps
ENSNBRG00000001829	sall4	100	96.303	ENSONIG00000016557	sall4	100	96.303	Oreochromis_niloticus
ENSNBRG00000001829	sall4	99	52.889	ENSOANG00000008667	SALL4	97	52.847	Ornithorhynchus_anatinus
ENSNBRG00000001829	sall4	98	43.733	ENSOCUG00000011797	SALL4	98	43.604	Oryctolagus_cuniculus
ENSNBRG00000001829	sall4	100	75.138	ENSORLG00000016130	sall4	100	75.138	Oryzias_latipes
ENSNBRG00000001829	sall4	100	75.185	ENSORLG00020007339	sall4	100	75.185	Oryzias_latipes_hni
ENSNBRG00000001829	sall4	100	75.046	ENSORLG00015002265	sall4	100	75.046	Oryzias_latipes_hsok
ENSNBRG00000001829	sall4	100	76.313	ENSOMEG00000017344	sall4	100	76.313	Oryzias_melastigma
ENSNBRG00000001829	sall4	97	44.907	ENSOGAG00000013799	SALL4	99	44.968	Otolemur_garnettii
ENSNBRG00000001829	sall4	100	40.609	ENSOARG00000014570	SALL4	100	40.470	Ovis_aries
ENSNBRG00000001829	sall4	100	43.695	ENSPPAG00000038064	SALL4	85	67.308	Pan_paniscus
ENSNBRG00000001829	sall4	100	43.663	ENSPPRG00000008677	SALL4	77	67.308	Panthera_pardus
ENSNBRG00000001829	sall4	100	43.673	ENSPTRG00000013631	SALL4	85	67.308	Pan_troglodytes
ENSNBRG00000001829	sall4	87	45.605	ENSPANG00000021792	SALL4	86	67.308	Papio_anubis
ENSNBRG00000001829	sall4	100	62.047	ENSPKIG00000007074	sall4	100	62.116	Paramormyrops_kingsleyae
ENSNBRG00000001829	sall4	99	52.469	ENSPSIG00000009066	SALL4	99	52.780	Pelodiscus_sinensis
ENSNBRG00000001829	sall4	100	67.127	ENSPMGG00000022551	sall4	100	66.851	Periophthalmus_magnuspinnatus
ENSNBRG00000001829	sall4	100	41.696	ENSPEMG00000022706	Sall4	97	81.944	Peromyscus_maniculatus_bairdii
ENSNBRG00000001829	sall4	99	49.693	ENSPCIG00000022838	SALL4	97	49.737	Phascolarctos_cinereus
ENSNBRG00000001829	sall4	100	76.909	ENSPFOG00000001442	sall4	100	76.449	Poecilia_formosa
ENSNBRG00000001829	sall4	100	76.817	ENSPLAG00000008760	sall4	100	76.357	Poecilia_latipinna
ENSNBRG00000001829	sall4	100	77.185	ENSPMEG00000008497	sall4	100	76.725	Poecilia_mexicana
ENSNBRG00000001829	sall4	100	76.449	ENSPREG00000021140	sall4	100	75.989	Poecilia_reticulata
ENSNBRG00000001829	sall4	100	43.745	ENSPPYG00000011138	SALL4	100	43.745	Pongo_abelii
ENSNBRG00000001829	sall4	100	41.466	ENSPCAG00000004726	SALL4	99	41.609	Procavia_capensis
ENSNBRG00000001829	sall4	100	43.234	ENSPCOG00000016321	SALL4	82	67.308	Propithecus_coquereli
ENSNBRG00000001829	sall4	94	42.393	ENSPVAG00000002075	SALL4	94	42.565	Pteropus_vampyrus
ENSNBRG00000001829	sall4	100	97.780	ENSPNYG00000021738	sall4	100	97.780	Pundamilia_nyererei
ENSNBRG00000001829	sall4	99	64.946	ENSPNAG00000020929	sall4	99	65.245	Pygocentrus_nattereri
ENSNBRG00000001829	sall4	100	41.860	ENSRNOG00000050035	Sall4	83	65.385	Rattus_norvegicus
ENSNBRG00000001829	sall4	100	43.673	ENSRBIG00000039876	SALL4	100	43.881	Rhinopithecus_bieti
ENSNBRG00000001829	sall4	100	43.673	ENSRROG00000036585	SALL4	100	43.881	Rhinopithecus_roxellana
ENSNBRG00000001829	sall4	100	44.077	ENSSBOG00000030011	SALL4	85	67.308	Saimiri_boliviensis_boliviensis
ENSNBRG00000001829	sall4	99	65.385	ENSSHAG00000018013	SALL4	91	65.385	Sarcophilus_harrisii
ENSNBRG00000001829	sall4	100	61.789	ENSSFOG00015021075	sall4	100	61.969	Scleropages_formosus
ENSNBRG00000001829	sall4	100	79.762	ENSSMAG00000019218	sall4	99	80.128	Scophthalmus_maximus
ENSNBRG00000001829	sall4	100	82.860	ENSSDUG00000004657	sall4	100	83.318	Seriola_dumerili
ENSNBRG00000001829	sall4	100	82.035	ENSSLDG00000004973	sall4	100	82.493	Seriola_lalandi_dorsalis
ENSNBRG00000001829	sall4	100	82.505	ENSSPAG00000001978	sall4	100	82.505	Stegastes_partitus
ENSNBRG00000001829	sall4	100	42.037	ENSSSCG00000007479	SALL4	100	41.950	Sus_scrofa
ENSNBRG00000001829	sall4	100	76.103	ENSTRUG00000007410	sall4	100	76.103	Takifugu_rubripes
ENSNBRG00000001829	sall4	100	74.654	ENSTNIG00000012460	sall4	100	74.839	Tetraodon_nigroviridis
ENSNBRG00000001829	sall4	98	42.294	ENSTTRG00000007753	SALL4	99	41.797	Tursiops_truncatus
ENSNBRG00000001829	sall4	100	44.007	ENSUAMG00000010113	SALL4	100	44.386	Ursus_americanus
ENSNBRG00000001829	sall4	98	43.869	ENSUMAG00000024274	SALL4	99	44.190	Ursus_maritimus
ENSNBRG00000001829	sall4	100	49.650	ENSXETG00000012326	sall4	100	49.471	Xenopus_tropicalis
ENSNBRG00000001829	sall4	100	69.450	ENSXCOG00000015467	sall4	100	68.991	Xiphophorus_couchianus
ENSNBRG00000001829	sall4	100	68.784	ENSXMAG00000012692	sall4	100	68.330	Xiphophorus_maculatus