EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001834 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3241 bases
Position: chrJH422284.1:9630336-9633576
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002253	zf-C2H2	PF00096.26	1.5e-19	1	3
ENSNBRP00000002253	zf-C2H2	PF00096.26	1.5e-19	2	3
ENSNBRP00000002253	zf-C2H2	PF00096.26	1.5e-19	3	3
ENSNBRP00000002253	zf-met	PF12874.7	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002344	-	384	-	ENSNBRP00000002253	127 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000001834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001834	-	92	48.889	ENSNBRG00000000960	-	94	44.248
ENSNBRG00000001834	-	99	43.590	ENSNBRG00000016169	-	65	43.590
ENSNBRG00000001834	-	92	37.607	ENSNBRG00000001761	-	50	37.607
ENSNBRG00000001834	-	100	38.462	ENSNBRG00000009815	-	82	38.462
ENSNBRG00000001834	-	94	34.146	ENSNBRG00000009811	-	85	34.146
ENSNBRG00000001834	-	97	42.857	ENSNBRG00000024048	-	83	42.857
ENSNBRG00000001834	-	100	41.905	ENSNBRG00000021967	-	65	41.905
ENSNBRG00000001834	-	89	48.276	ENSNBRG00000006125	-	91	48.276
ENSNBRG00000001834	-	94	40.171	ENSNBRG00000023956	-	54	40.171
ENSNBRG00000001834	-	87	82.883	ENSNBRG00000010351	-	86	82.883
ENSNBRG00000001834	-	98	49.315	ENSNBRG00000009128	-	57	49.315
ENSNBRG00000001834	-	94	45.556	ENSNBRG00000016219	-	84	45.556
ENSNBRG00000001834	-	100	39.316	ENSNBRG00000005805	-	95	39.316
ENSNBRG00000001834	-	94	43.363	ENSNBRG00000024345	-	89	43.363
ENSNBRG00000001834	-	92	41.880	ENSNBRG00000024179	-	61	41.880
ENSNBRG00000001834	-	94	44.828	ENSNBRG00000022241	-	88	44.828
ENSNBRG00000001834	-	98	40.000	ENSNBRG00000018718	zbtb47b	61	37.168
ENSNBRG00000001834	-	89	40.708	ENSNBRG00000013583	-	90	40.708
ENSNBRG00000001834	-	92	42.727	ENSNBRG00000024046	-	53	42.727
ENSNBRG00000001834	-	99	45.977	ENSNBRG00000001163	-	90	46.809
ENSNBRG00000001834	-	100	44.248	ENSNBRG00000021355	-	76	44.248
ENSNBRG00000001834	-	93	40.351	ENSNBRG00000016564	-	81	40.351
ENSNBRG00000001834	-	92	44.554	ENSNBRG00000019770	-	92	43.299
ENSNBRG00000001834	-	100	42.857	ENSNBRG00000008123	-	78	42.857
ENSNBRG00000001834	-	100	41.964	ENSNBRG00000000321	-	98	46.591
ENSNBRG00000001834	-	99	40.678	ENSNBRG00000016666	-	96	40.678
ENSNBRG00000001834	-	91	43.363	ENSNBRG00000000793	-	99	43.363
ENSNBRG00000001834	-	99	41.593	ENSNBRG00000024066	-	84	41.593
ENSNBRG00000001834	-	100	36.752	ENSNBRG00000004381	-	77	39.175
ENSNBRG00000001834	-	94	36.842	ENSNBRG00000005175	zbtb41	65	36.842
ENSNBRG00000001834	-	100	39.535	ENSNBRG00000016550	-	86	39.535
ENSNBRG00000001834	-	99	41.593	ENSNBRG00000002902	-	97	41.593
ENSNBRG00000001834	-	100	34.783	ENSNBRG00000024294	-	59	34.783
ENSNBRG00000001834	-	100	39.344	ENSNBRG00000024293	-	80	39.344
ENSNBRG00000001834	-	92	52.000	ENSNBRG00000016234	-	64	52.000
ENSNBRG00000001834	-	100	41.739	ENSNBRG00000021237	-	90	41.739
ENSNBRG00000001834	-	100	44.545	ENSNBRG00000007602	-	82	44.545
ENSNBRG00000001834	-	99	42.593	ENSNBRG00000024054	-	58	42.593
ENSNBRG00000001834	-	100	43.038	ENSNBRG00000024051	-	51	43.038
ENSNBRG00000001834	-	100	49.367	ENSNBRG00000009075	znf236	55	49.367
ENSNBRG00000001834	-	100	42.478	ENSNBRG00000000523	-	65	42.478
ENSNBRG00000001834	-	99	40.517	ENSNBRG00000009279	-	87	40.517
ENSNBRG00000001834	-	100	44.248	ENSNBRG00000016282	-	91	44.248
ENSNBRG00000001834	-	100	40.708	ENSNBRG00000016582	-	86	40.708
ENSNBRG00000001834	-	100	44.595	ENSNBRG00000001608	-	94	44.595
ENSNBRG00000001834	-	95	41.593	ENSNBRG00000003250	-	91	40.625
ENSNBRG00000001834	-	99	42.276	ENSNBRG00000015652	-	81	42.276
ENSNBRG00000001834	-	98	47.297	ENSNBRG00000010405	-	89	43.243
ENSNBRG00000001834	-	100	43.956	ENSNBRG00000024086	-	55	43.956
ENSNBRG00000001834	-	92	41.880	ENSNBRG00000000577	-	72	41.880
ENSNBRG00000001834	-	97	40.952	ENSNBRG00000000305	-	81	40.952
ENSNBRG00000001834	-	87	36.364	ENSNBRG00000011785	snai2	56	36.364
ENSNBRG00000001834	-	100	42.453	ENSNBRG00000016603	-	88	42.453
ENSNBRG00000001834	-	92	39.474	ENSNBRG00000019004	-	61	39.474
ENSNBRG00000001834	-	100	40.708	ENSNBRG00000005849	-	85	40.708
ENSNBRG00000001834	-	100	41.463	ENSNBRG00000016577	si:dkey-182i3.9	90	39.000
ENSNBRG00000001834	-	99	45.349	ENSNBRG00000023229	-	75	45.349
ENSNBRG00000001834	-	100	38.596	ENSNBRG00000008223	-	77	38.182
ENSNBRG00000001834	-	92	39.623	ENSNBRG00000013604	-	72	39.623
ENSNBRG00000001834	-	100	42.202	ENSNBRG00000005796	-	92	42.202
ENSNBRG00000001834	-	89	59.649	ENSNBRG00000012376	-	84	59.649
ENSNBRG00000001834	-	100	43.023	ENSNBRG00000004822	-	50	43.023
ENSNBRG00000001834	-	100	41.667	ENSNBRG00000000708	-	84	41.667
ENSNBRG00000001834	-	98	44.898	ENSNBRG00000024344	-	74	45.361
ENSNBRG00000001834	-	99	42.708	ENSNBRG00000019481	-	90	42.708
ENSNBRG00000001834	-	99	48.052	ENSNBRG00000008827	znf319b	90	43.956
ENSNBRG00000001834	-	99	48.148	ENSNBRG00000015442	ZNF319	87	48.148
ENSNBRG00000001834	-	99	46.512	ENSNBRG00000015873	-	94	46.512
ENSNBRG00000001834	-	98	41.739	ENSNBRG00000000492	-	65	41.739
ENSNBRG00000001834	-	100	42.045	ENSNBRG00000023960	-	63	42.045
ENSNBRG00000001834	-	92	43.363	ENSNBRG00000024354	-	91	43.363
ENSNBRG00000001834	-	97	40.171	ENSNBRG00000003000	-	83	40.171
ENSNBRG00000001834	-	100	47.475	ENSNBRG00000014088	-	97	46.739
ENSNBRG00000001834	-	97	43.299	ENSNBRG00000006757	-	69	43.299
ENSNBRG00000001834	-	100	43.750	ENSNBRG00000004557	-	61	43.750
ENSNBRG00000001834	-	100	45.133	ENSNBRG00000003124	-	93	45.679
ENSNBRG00000001834	-	93	45.000	ENSNBRG00000002946	-	50	45.000
ENSNBRG00000001834	-	92	41.880	ENSNBRG00000013501	-	76	41.880
ENSNBRG00000001834	-	99	43.836	ENSNBRG00000002542	-	82	43.836
ENSNBRG00000001834	-	100	40.708	ENSNBRG00000005823	-	72	40.708
ENSNBRG00000001834	-	100	39.785	ENSNBRG00000010987	-	77	36.752
ENSNBRG00000001834	-	100	43.269	ENSNBRG00000010194	-	65	43.269
ENSNBRG00000001834	-	98	43.478	ENSNBRG00000007311	-	80	43.478
ENSNBRG00000001834	-	100	41.481	ENSNBRG00000004523	-	90	41.481
ENSNBRG00000001834	-	92	43.902	ENSNBRG00000006411	-	82	43.902
ENSNBRG00000001834	-	87	77.477	ENSNBRG00000012391	gfi1b	50	77.477
ENSNBRG00000001834	-	89	34.545	ENSNBRG00000021998	-	54	34.545
ENSNBRG00000001834	-	100	44.828	ENSNBRG00000024014	-	58	44.828
ENSNBRG00000001834	-	92	40.299	ENSNBRG00000024019	-	88	40.299
ENSNBRG00000001834	-	99	35.433	ENSNBRG00000004976	prdm5	59	35.433
ENSNBRG00000001834	-	92	43.373	ENSNBRG00000001641	-	80	43.373
ENSNBRG00000001834	-	100	43.103	ENSNBRG00000008106	-	91	43.103
ENSNBRG00000001834	-	100	40.171	ENSNBRG00000004723	-	83	40.171

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001834	-	94	78.761	ENSAMEG00000013858	-	85	78.761	Ailuropoda_melanoleuca
ENSNBRG00000001834	-	88	62.500	ENSACIG00000002180	-	95	62.500	Amphilophus_citrinellus
ENSNBRG00000001834	-	89	82.301	ENSACLG00000001258	-	91	82.301	Astatotilapia_calliptera
ENSNBRG00000001834	-	94	80.556	ENSCAPG00000016268	-	95	80.556	Cavia_aperea
ENSNBRG00000001834	-	94	79.279	ENSCPBG00000015742	-	82	79.279	Chrysemys_picta_bellii
ENSNBRG00000001834	-	94	74.561	ENSCING00000011342	-	60	74.561	Ciona_intestinalis
ENSNBRG00000001834	-	89	75.221	ENSCSAVG00000005904	-	70	75.221	Ciona_savignyi
ENSNBRG00000001834	-	94	78.761	ENSCGRG00000013485	-	84	78.761	Cricetulus_griseus_crigri
ENSNBRG00000001834	-	94	78.761	ENSDORG00000023443	-	84	78.761	Dipodomys_ordii
ENSNBRG00000001834	-	87	77.477	ENSEBUG00000008075	gfi1ab	55	77.477	Eptatretus_burgeri
ENSNBRG00000001834	-	94	78.761	ENSFDAG00000019296	-	84	78.761	Fukomys_damarensis
ENSNBRG00000001834	-	94	79.279	ENSGAGG00000015899	GFI1	82	79.279	Gopherus_agassizii
ENSNBRG00000001834	-	94	80.556	ENSJJAG00000022622	-	95	80.556	Jaculus_jaculus
ENSNBRG00000001834	-	88	79.464	ENSLACG00000017590	-	51	79.464	Latimeria_chalumnae
ENSNBRG00000001834	-	94	78.761	ENSMMUG00000005068	GFI1	84	78.761	Macaca_mulatta
ENSNBRG00000001834	-	94	78.761	ENSMAUG00000021273	-	84	78.761	Mesocricetus_auratus
ENSNBRG00000001834	-	94	78.761	ENSMOCG00000004478	-	84	78.761	Microtus_ochrogaster
ENSNBRG00000001834	-	94	78.761	MGP_CAROLIEiJ_G0027508	Gfi1	84	78.761	Mus_caroli
ENSNBRG00000001834	-	94	78.761	MGP_PahariEiJ_G0017280	Gfi1	84	78.761	Mus_pahari
ENSNBRG00000001834	-	94	78.761	ENSNGAG00000002549	-	84	78.761	Nannospalax_galili
ENSNBRG00000001834	-	94	78.761	ENSODEG00000006410	-	84	78.761	Octodon_degus
ENSNBRG00000001834	-	89	78.761	ENSOANG00000022289	-	60	78.761	Ornithorhynchus_anatinus
ENSNBRG00000001834	-	94	79.817	ENSPTIG00000002680	-	81	79.817	Panthera_tigris_altaica
ENSNBRG00000001834	-	89	78.761	ENSPMGG00000011041	GFI1	54	78.761	Periophthalmus_magnuspinnatus
ENSNBRG00000001834	-	89	78.761	ENSPLAG00000010879	gfi1ab	52	78.761	Poecilia_latipinna
ENSNBRG00000001834	-	89	82.301	ENSPNYG00000001775	-	88	82.301	Pundamilia_nyererei
ENSNBRG00000001834	-	87	80.180	ENSSLDG00000017614	-	83	80.180	Seriola_lalandi_dorsalis
ENSNBRG00000001834	-	94	78.761	ENSSPAG00000009140	gfi1ab	54	78.761	Stegastes_partitus
ENSNBRG00000001834	-	94	78.761	ENSUMAG00000011251	-	84	78.761	Ursus_maritimus
ENSNBRG00000001834	-	99	85.714	ENSXCOG00000013213	-	53	85.714	Xiphophorus_couchianus
ENSNBRG00000001834	-	92	74.359	ENSXCOG00000009186	-	90	74.359	Xiphophorus_couchianus