EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000001846 (Gene tree)
Gene ID: 102794868
Gene Symbol: -
Alias: fa12h12|sfrs6a|wu:fa12h12|wu:fa13e06|zgc:63770
Full Name: serine/arginine-rich splicing factor 6-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4901 bases
Position: chrJH422281.1:6200408-6205308
Accession: 102794868
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002302	RRM_1	PF00076.22	9.2e-32	1	2
ENSNBRP00000002302	RRM_1	PF00076.22	9.2e-32	2	2
ENSNBRP00000002289	RRM_1	PF00076.22	4.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002380	-	2392	-	ENSNBRP00000002289	260 (aa)	-	-
ENSNBRT00000002393	-	1080	XM_006785417	ENSNBRP00000002302	359 (aa)	XP_006785480	-

Gene Model

Click here to download ENSNBRG00000001846's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000001846's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000001846	-	51	39.378	ENSNBRG00000003888	srsf9	66	40.678
ENSNBRG00000001846	-	67	37.805	ENSNBRG00000008134	-	88	38.462
ENSNBRG00000001846	-	92	66.364	ENSNBRG00000014709	-	57	86.339
ENSNBRG00000001846	-	58	33.613	ENSNBRG00000008041	srsf1b	65	37.143
ENSNBRG00000001846	-	50	63.784	ENSNBRG00000000771	srsf5a	63	63.441
ENSNBRG00000001846	-	50	63.587	ENSNBRG00000001285	srsf5b	62	64.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000001846	-	52	87.634	ENSG00000124193	SRSF6	58	93.590	Homo_sapiens
ENSNBRG00000001846	-	89	80.997	ENSACIG00000023658	-	55	95.000	Amphilophus_citrinellus
ENSNBRG00000001846	-	77	68.364	ENSACIG00000020091	-	95	82.946	Amphilophus_citrinellus
ENSNBRG00000001846	-	87	71.111	ENSAOCG00000004309	-	56	86.885	Amphiprion_ocellaris
ENSNBRG00000001846	-	62	76.856	ENSAPEG00000020746	-	64	82.979	Amphiprion_percula
ENSNBRG00000001846	-	91	86.810	ENSAPEG00000013086	-	78	97.268	Amphiprion_percula
ENSNBRG00000001846	-	51	84.783	ENSATEG00000007255	-	70	81.967	Anabas_testudineus
ENSNBRG00000001846	-	52	88.108	ENSACAG00000002061	SRSF6	51	88.525	Anolis_carolinensis
ENSNBRG00000001846	-	52	87.634	ENSANAG00000024080	SRSF6	58	93.590	Aotus_nancymaae
ENSNBRG00000001846	-	91	71.779	ENSAMXG00000042692	-	96	88.148	Astyanax_mexicanus
ENSNBRG00000001846	-	52	87.634	ENSBTAG00000008527	SRSF6	58	94.872	Bos_taurus
ENSNBRG00000001846	-	52	87.634	ENSCJAG00000048403	SRSF6	67	88.525	Callithrix_jacchus
ENSNBRG00000001846	-	52	87.634	ENSCAFG00000009289	SRSF6	58	94.872	Canis_familiaris
ENSNBRG00000001846	-	52	87.634	ENSCAFG00020013559	SRSF6	58	94.872	Canis_lupus_dingo
ENSNBRG00000001846	-	52	87.634	ENSCHIG00000015890	-	58	94.872	Capra_hircus
ENSNBRG00000001846	-	52	82.258	ENSCPOG00000011761	SRSF6	58	93.590	Cavia_porcellus
ENSNBRG00000001846	-	52	76.471	ENSCCAG00000018540	-	60	76.630	Cebus_capucinus
ENSNBRG00000001846	-	52	87.634	ENSCCAG00000026018	-	58	93.590	Cebus_capucinus
ENSNBRG00000001846	-	52	87.634	ENSCATG00000030794	SRSF6	58	93.590	Cercocebus_atys
ENSNBRG00000001846	-	52	87.634	ENSCLAG00000010247	SRSF6	58	93.590	Chinchilla_lanigera
ENSNBRG00000001846	-	52	87.166	ENSCPBG00000018200	SRSF6	53	89.674	Chrysemys_picta_bellii
ENSNBRG00000001846	-	52	87.634	ENSCGRG00001022339	Srsf6	98	61.871	Cricetulus_griseus_chok1gshd
ENSNBRG00000001846	-	52	88.235	ENSDARG00000016783	srsf6b	82	96.154	Danio_rerio
ENSNBRG00000001846	-	52	87.634	ENSDNOG00000008410	SRSF6	52	88.525	Dasypus_novemcinctus
ENSNBRG00000001846	-	52	87.634	ENSDORG00000028378	Srsf6	58	93.590	Dipodomys_ordii
ENSNBRG00000001846	-	52	83.871	ENSETEG00000006221	SRSF6	52	84.699	Echinops_telfairi
ENSNBRG00000001846	-	52	87.634	ENSECAG00000023932	SRSF6	56	88.525	Equus_caballus
ENSNBRG00000001846	-	51	88.525	ENSELUG00000013506	SRSF6	70	94.872	Esox_lucius
ENSNBRG00000001846	-	91	79.268	ENSFHEG00000023065	srsf6a	86	93.989	Fundulus_heteroclitus
ENSNBRG00000001846	-	50	74.033	ENSGMOG00000006105	srsf6a	62	72.928	Gadus_morhua
ENSNBRG00000001846	-	52	87.701	ENSGALG00000000990	SRSF6	98	59.441	Gallus_gallus
ENSNBRG00000001846	-	90	73.851	ENSGACG00000006084	srsf6a	66	87.978	Gasterosteus_aculeatus
ENSNBRG00000001846	-	52	87.166	ENSGAGG00000003238	SRSF6	53	89.674	Gopherus_agassizii
ENSNBRG00000001846	-	52	87.634	ENSGGOG00000009808	SRSF6	58	93.590	Gorilla_gorilla
ENSNBRG00000001846	-	94	66.964	ENSHBUG00000006386	-	57	86.339	Haplochromis_burtoni
ENSNBRG00000001846	-	52	87.634	ENSHGLG00000007348	SRSF6	58	93.590	Heterocephalus_glaber_female
ENSNBRG00000001846	-	54	68.718	ENSHGLG00000007701	-	56	67.760	Heterocephalus_glaber_female
ENSNBRG00000001846	-	88	70.347	ENSHCOG00000002740	srsf6a	87	85.792	Hippocampus_comes
ENSNBRG00000001846	-	52	87.634	ENSSTOG00000010866	SRSF6	58	93.590	Ictidomys_tridecemlineatus
ENSNBRG00000001846	-	91	68.923	ENSKMAG00000011934	srsf6a	100	76.415	Kryptolebias_marmoratus
ENSNBRG00000001846	-	95	69.364	ENSLACG00000005466	SRSF6	54	88.525	Latimeria_chalumnae
ENSNBRG00000001846	-	52	87.634	ENSMFAG00000036925	SRSF6	58	93.590	Macaca_fascicularis
ENSNBRG00000001846	-	52	87.634	ENSMMUG00000006742	SRSF6	58	93.590	Macaca_mulatta
ENSNBRG00000001846	-	52	87.097	ENSMNEG00000027392	-	58	92.308	Macaca_nemestrina
ENSNBRG00000001846	-	52	98.919	ENSMAMG00000017161	srsf6a	52	98.907	Mastacembelus_armatus
ENSNBRG00000001846	-	65	76.569	ENSMZEG00005008032	-	56	86.339	Maylandia_zebra
ENSNBRG00000001846	-	79	73.592	ENSMZEG00005020658	-	60	87.978	Maylandia_zebra
ENSNBRG00000001846	-	52	87.097	ENSMICG00000008537	SRSF6	58	93.590	Microcebus_murinus
ENSNBRG00000001846	-	52	86.559	ENSMODG00000003107	SRSF6	53	88.525	Monodelphis_domestica
ENSNBRG00000001846	-	100	69.193	ENSMALG00000003702	srsf6a	100	69.193	Monopterus_albus
ENSNBRG00000001846	-	52	87.634	MGP_CAROLIEiJ_G0024606	Srsf6	98	61.871	Mus_caroli
ENSNBRG00000001846	-	52	87.634	ENSMUSG00000016921	Srsf6	98	61.871	Mus_musculus
ENSNBRG00000001846	-	52	87.634	MGP_PahariEiJ_G0026050	Srsf6	98	61.871	Mus_pahari
ENSNBRG00000001846	-	52	87.634	MGP_SPRETEiJ_G0025528	Srsf6	98	61.871	Mus_spretus
ENSNBRG00000001846	-	52	87.634	ENSMPUG00000017692	SRSF6	63	88.525	Mustela_putorius_furo
ENSNBRG00000001846	-	52	59.155	ENSMLUG00000016618	SRSF6	52	58.095	Myotis_lucifugus
ENSNBRG00000001846	-	52	87.634	ENSNGAG00000017560	Srsf6	58	93.590	Nannospalax_galili
ENSNBRG00000001846	-	52	87.634	ENSNLEG00000006524	SRSF6	58	93.590	Nomascus_leucogenys
ENSNBRG00000001846	-	52	86.559	ENSMEUG00000014615	SRSF6	60	88.525	Notamacropus_eugenii
ENSNBRG00000001846	-	92	49.791	ENSONIG00000020247	-	52	85.792	Oreochromis_niloticus
ENSNBRG00000001846	-	51	52.747	ENSOCUG00000023999	-	70	53.333	Oryctolagus_cuniculus
ENSNBRG00000001846	-	52	69.231	ENSOCUG00000009785	-	62	68.947	Oryctolagus_cuniculus
ENSNBRG00000001846	-	52	87.097	ENSOGAG00000014468	SRSF6	52	87.978	Otolemur_garnettii
ENSNBRG00000001846	-	52	72.581	ENSPPAG00000043131	-	56	72.727	Pan_paniscus
ENSNBRG00000001846	-	52	87.097	ENSPPAG00000034327	-	52	87.978	Pan_paniscus
ENSNBRG00000001846	-	52	72.581	ENSPTRG00000046274	-	56	72.727	Pan_troglodytes
ENSNBRG00000001846	-	52	87.634	ENSPTRG00000044686	-	58	93.590	Pan_troglodytes
ENSNBRG00000001846	-	52	87.634	ENSPANG00000035224	SRSF6	58	93.590	Papio_anubis
ENSNBRG00000001846	-	100	77.067	ENSPKIG00000018463	-	77	94.872	Paramormyrops_kingsleyae
ENSNBRG00000001846	-	77	73.913	ENSPKIG00000015703	-	95	60.265	Paramormyrops_kingsleyae
ENSNBRG00000001846	-	100	71.429	ENSPMGG00000014963	srsf6a	85	97.814	Periophthalmus_magnuspinnatus
ENSNBRG00000001846	-	52	86.559	ENSPCIG00000003820	SRSF6	98	61.871	Phascolarctos_cinereus
ENSNBRG00000001846	-	100	71.622	ENSPLAG00000009243	srsf6a	79	95.238	Poecilia_latipinna
ENSNBRG00000001846	-	91	79.758	ENSPMEG00000006042	SRSF6	76	95.628	Poecilia_mexicana
ENSNBRG00000001846	-	52	87.634	ENSPPYG00000011019	SRSF6	53	88.525	Pongo_abelii
ENSNBRG00000001846	-	62	75.893	ENSPCAG00000010954	SRSF6	55	86.885	Procavia_capensis
ENSNBRG00000001846	-	52	87.097	ENSPCOG00000026364	SRSF6	58	93.590	Propithecus_coquereli
ENSNBRG00000001846	-	52	87.097	ENSPVAG00000015232	SRSF6	53	88.525	Pteropus_vampyrus
ENSNBRG00000001846	-	57	71.193	ENSPNYG00000004944	-	57	86.339	Pundamilia_nyererei
ENSNBRG00000001846	-	100	94.521	ENSPNYG00000011272	-	100	94.521	Pundamilia_nyererei
ENSNBRG00000001846	-	52	87.634	ENSRNOG00000006380	Srsf6	53	88.525	Rattus_norvegicus
ENSNBRG00000001846	-	52	86.559	ENSRBIG00000041414	SRSF6	98	61.151	Rhinopithecus_bieti
ENSNBRG00000001846	-	52	87.634	ENSRROG00000029989	SRSF6	58	93.590	Rhinopithecus_roxellana
ENSNBRG00000001846	-	52	87.634	ENSSBOG00000033708	-	58	93.590	Saimiri_boliviensis_boliviensis
ENSNBRG00000001846	-	52	86.559	ENSSHAG00000012805	SRSF6	53	88.525	Sarcophilus_harrisii
ENSNBRG00000001846	-	91	71.676	ENSSFOG00015019681	-	52	86.979	Scleropages_formosus
ENSNBRG00000001846	-	95	61.176	ENSSFOG00015015169	SRSF6	59	92.896	Scleropages_formosus
ENSNBRG00000001846	-	68	88.710	ENSSMAG00000014819	-	84	91.489	Scophthalmus_maximus
ENSNBRG00000001846	-	65	70.902	ENSSMAG00000017447	-	55	82.514	Scophthalmus_maximus
ENSNBRG00000001846	-	91	85.627	ENSSDUG00000016097	srsf6a	52	98.907	Seriola_dumerili
ENSNBRG00000001846	-	91	85.627	ENSSLDG00000022841	srsf6a	93	76.852	Seriola_lalandi_dorsalis
ENSNBRG00000001846	-	52	89.189	ENSSPUG00000004967	SRSF6	98	59.441	Sphenodon_punctatus
ENSNBRG00000001846	-	76	98.919	ENSSPAG00000002362	srsf6a	84	96.809	Stegastes_partitus
ENSNBRG00000001846	-	52	87.634	ENSSSCG00000007362	SRSF6	60	88.525	Sus_scrofa
ENSNBRG00000001846	-	52	88.108	ENSTGUG00000003455	SRSF6	52	89.071	Taeniopygia_guttata
ENSNBRG00000001846	-	89	79.128	ENSTNIG00000001692	srsf6a	56	95.628	Tetraodon_nigroviridis
ENSNBRG00000001846	-	52	87.634	ENSUAMG00000003559	SRSF6	58	94.872	Ursus_americanus
ENSNBRG00000001846	-	91	76.435	ENSXMAG00000021849	srsf6a	86	93.443	Xiphophorus_maculatus