EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000002072 (Gene tree)
Gene ID: -
Gene Symbol: rps18
Alias: chunp6895|ke3
Full Name: 40S ribosomal protein S18-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 685 bases
Position: chrAFNY01116227.1:131-815
Accession: 102794610
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002759	Ribosomal_S13	PF00416.22	4.8e-17	1	1
ENSNBRP00000002821	Ribosomal_S13	PF00416.22	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002858	-	252	-	ENSNBRP00000002759	83 (aa)	-	-
ENSNBRT00000002927	-	303	XM_006810970	ENSNBRP00000002821	100 (aa)	XP_006811033	-

Gene Model

Click here to download ENSNBRG00000002072's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002072's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002072	rps18	76	63.492	ENSCSAVG00000005312	-	50	53.731	Ciona_savignyi
ENSNBRG00000002072	rps18	76	98.413	ENSDARG00000100392	rps18	62	98.413	Danio_rerio
ENSNBRG00000002072	rps18	90	54.878	ENSDORG00000024194	-	50	54.878	Dipodomys_ordii
ENSNBRG00000002072	rps18	76	66.667	ENSLAFG00000026586	-	61	66.667	Loxodonta_africana
ENSNBRG00000002072	rps18	76	96.825	ENSLAFG00000032173	-	57	76.829	Loxodonta_africana
ENSNBRG00000002072	rps18	76	96.825	ENSMUSG00000008668	Rps18	59	96.825	Mus_musculus
ENSNBRG00000002072	rps18	76	98.413	MGP_PahariEiJ_G0020433	-	55	98.413	Mus_pahari
ENSNBRG00000002072	rps18	76	96.825	MGP_SPRETEiJ_G0022340	-	73	96.825	Mus_spretus
ENSNBRG00000002072	rps18	92	74.699	ENSPPAG00000023898	-	55	74.699	Pan_paniscus
ENSNBRG00000002072	rps18	81	61.194	ENSRNOG00000047243	AABR07033357.1	57	61.194	Rattus_norvegicus
ENSNBRG00000002072	rps18	90	53.571	YDR450W	RPS18A	58	53.571	Saccharomyces_cerevisiae
ENSNBRG00000002072	rps18	90	53.571	YML026C	RPS18B	58	53.571	Saccharomyces_cerevisiae
ENSNBRG00000002072	rps18	76	98.413	ENSSMAG00000014473	rps18	56	74.725	Scophthalmus_maximus