EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002220 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5280 bases
Position: chrJH422476.1:630789-636068
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002854	MMR_HSR1	PF01926.23	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002960	-	1320	-	ENSNBRP00000002854	439 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000002220's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002220's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002220	si:ch211-11k18.4	98	60.648	ENSNBRG00000006068	si:dkey-98f17.5	96	60.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002220	si:ch211-11k18.4	99	60.138	ENSAPOG00000010378	si:dkey-98f17.5	96	60.138	Acanthochromis_polyacanthus
ENSNBRG00000002220	si:ch211-11k18.4	98	91.435	ENSAPOG00000018833	si:ch211-11k18.4	96	91.435	Acanthochromis_polyacanthus
ENSNBRG00000002220	si:ch211-11k18.4	97	91.059	ENSACIG00000006696	si:ch211-11k18.4	96	90.993	Amphilophus_citrinellus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.046	ENSACIG00000017719	si:dkey-98f17.5	96	60.046	Amphilophus_citrinellus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.277	ENSAOCG00000008661	si:dkey-98f17.5	96	60.277	Amphiprion_ocellaris
ENSNBRG00000002220	si:ch211-11k18.4	98	91.435	ENSAOCG00000014284	si:ch211-11k18.4	96	91.435	Amphiprion_ocellaris
ENSNBRG00000002220	si:ch211-11k18.4	100	90.205	ENSAPEG00000014910	si:ch211-11k18.4	98	90.205	Amphiprion_percula
ENSNBRG00000002220	si:ch211-11k18.4	98	60.277	ENSAPEG00000022447	si:dkey-98f17.5	96	60.277	Amphiprion_percula
ENSNBRG00000002220	si:ch211-11k18.4	98	89.583	ENSATEG00000004775	si:ch211-11k18.4	96	89.583	Anabas_testudineus
ENSNBRG00000002220	si:ch211-11k18.4	99	60.138	ENSATEG00000007188	si:dkey-98f17.5	96	60.277	Anabas_testudineus
ENSNBRG00000002220	si:ch211-11k18.4	97	65.888	ENSACAG00000028632	-	94	65.888	Anolis_carolinensis
ENSNBRG00000002220	si:ch211-11k18.4	98	60.508	ENSACLG00000001308	si:dkey-98f17.5	96	60.508	Astatotilapia_calliptera
ENSNBRG00000002220	si:ch211-11k18.4	98	98.380	ENSACLG00000007907	si:ch211-11k18.4	96	98.380	Astatotilapia_calliptera
ENSNBRG00000002220	si:ch211-11k18.4	98	81.713	ENSAMXG00000017817	si:ch211-11k18.4	96	81.713	Astyanax_mexicanus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.369	ENSAMXG00000001190	si:dkey-98f17.5	96	60.369	Astyanax_mexicanus
ENSNBRG00000002220	si:ch211-11k18.4	86	61.804	ENSCING00000020807	-	99	61.804	Ciona_intestinalis
ENSNBRG00000002220	si:ch211-11k18.4	99	59.310	ENSCSAVG00000009987	-	97	59.310	Ciona_savignyi
ENSNBRG00000002220	si:ch211-11k18.4	98	60.046	ENSCSEG00000017512	si:dkey-98f17.5	91	61.578	Cynoglossus_semilaevis
ENSNBRG00000002220	si:ch211-11k18.4	98	85.417	ENSCSEG00000017661	si:ch211-11k18.4	96	85.185	Cynoglossus_semilaevis
ENSNBRG00000002220	si:ch211-11k18.4	99	89.145	ENSCVAG00000015346	si:ch211-11k18.4	96	89.120	Cyprinodon_variegatus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.277	ENSCVAG00000011351	si:dkey-98f17.5	96	60.277	Cyprinodon_variegatus
ENSNBRG00000002220	si:ch211-11k18.4	98	84.028	ENSDARG00000087869	si:ch211-11k18.4	100	89.796	Danio_rerio
ENSNBRG00000002220	si:ch211-11k18.4	98	60.460	ENSDARG00000068863	si:dkey-98f17.5	98	60.460	Danio_rerio
ENSNBRG00000002220	si:ch211-11k18.4	84	57.995	ENSEBUG00000007620	si:dkey-98f17.5	99	57.995	Eptatretus_burgeri
ENSNBRG00000002220	si:ch211-11k18.4	99	59.318	ENSELUG00000003365	si:dkey-98f17.5	91	65.103	Esox_lucius
ENSNBRG00000002220	si:ch211-11k18.4	98	88.194	ENSFHEG00000019820	si:ch211-11k18.4	96	88.194	Fundulus_heteroclitus
ENSNBRG00000002220	si:ch211-11k18.4	99	59.677	ENSFHEG00000012744	si:dkey-98f17.5	96	59.815	Fundulus_heteroclitus
ENSNBRG00000002220	si:ch211-11k18.4	92	77.970	ENSGMOG00000003492	si:ch211-11k18.4	100	77.970	Gadus_morhua
ENSNBRG00000002220	si:ch211-11k18.4	98	86.343	ENSGAFG00000005677	si:ch211-11k18.4	96	86.343	Gambusia_affinis
ENSNBRG00000002220	si:ch211-11k18.4	98	59.584	ENSGAFG00000012362	si:dkey-98f17.5	86	59.584	Gambusia_affinis
ENSNBRG00000002220	si:ch211-11k18.4	92	89.851	ENSGACG00000013134	si:ch211-11k18.4	100	89.851	Gasterosteus_aculeatus
ENSNBRG00000002220	si:ch211-11k18.4	59	74.615	ENSGACG00000009399	si:dkey-98f17.5	100	74.615	Gasterosteus_aculeatus
ENSNBRG00000002220	si:ch211-11k18.4	98	98.611	ENSHBUG00000020638	si:ch211-11k18.4	96	98.611	Haplochromis_burtoni
ENSNBRG00000002220	si:ch211-11k18.4	98	60.739	ENSHBUG00000008331	si:dkey-98f17.5	96	60.739	Haplochromis_burtoni
ENSNBRG00000002220	si:ch211-11k18.4	90	61.209	ENSHCOG00000016505	si:dkey-98f17.5	81	66.205	Hippocampus_comes
ENSNBRG00000002220	si:ch211-11k18.4	98	87.500	ENSHCOG00000014773	si:ch211-11k18.4	96	87.500	Hippocampus_comes
ENSNBRG00000002220	si:ch211-11k18.4	92	68.564	ENSIPUG00000016694	si:ch211-11k18.4	84	70.681	Ictalurus_punctatus
ENSNBRG00000002220	si:ch211-11k18.4	99	78.802	ENSIPUG00000016678	si:ch211-11k18.4	100	79.032	Ictalurus_punctatus
ENSNBRG00000002220	si:ch211-11k18.4	96	59.861	ENSIPUG00000019981	si:dkey-98f17.5	96	58.784	Ictalurus_punctatus
ENSNBRG00000002220	si:ch211-11k18.4	99	58.986	ENSKMAG00000014997	si:dkey-98f17.5	96	59.122	Kryptolebias_marmoratus
ENSNBRG00000002220	si:ch211-11k18.4	98	88.889	ENSKMAG00000009327	si:ch211-11k18.4	96	88.889	Kryptolebias_marmoratus
ENSNBRG00000002220	si:ch211-11k18.4	98	59.862	ENSLBEG00000012756	si:dkey-98f17.5	96	59.633	Labrus_bergylta
ENSNBRG00000002220	si:ch211-11k18.4	99	63.510	ENSLACG00000004899	-	96	63.510	Latimeria_chalumnae
ENSNBRG00000002220	si:ch211-11k18.4	98	70.208	ENSLACG00000006280	si:ch211-11k18.4	96	70.208	Latimeria_chalumnae
ENSNBRG00000002220	si:ch211-11k18.4	97	59.016	ENSLACG00000017433	si:dkey-98f17.5	94	59.016	Latimeria_chalumnae
ENSNBRG00000002220	si:ch211-11k18.4	98	58.986	ENSLOCG00000003824	si:dkey-98f17.5	96	58.986	Lepisosteus_oculatus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.277	ENSMAMG00000014528	si:dkey-98f17.5	96	60.277	Mastacembelus_armatus
ENSNBRG00000002220	si:ch211-11k18.4	99	90.531	ENSMAMG00000002536	si:ch211-11k18.4	99	90.531	Mastacembelus_armatus
ENSNBRG00000002220	si:ch211-11k18.4	98	98.148	ENSMZEG00005008941	si:ch211-11k18.4	96	98.148	Maylandia_zebra
ENSNBRG00000002220	si:ch211-11k18.4	98	60.739	ENSMZEG00005016572	si:dkey-98f17.5	96	60.739	Maylandia_zebra
ENSNBRG00000002220	si:ch211-11k18.4	98	84.491	ENSMMOG00000012485	si:ch211-11k18.4	96	84.491	Mola_mola
ENSNBRG00000002220	si:ch211-11k18.4	98	60.185	ENSMALG00000012761	si:dkey-98f17.5	98	60.648	Monopterus_albus
ENSNBRG00000002220	si:ch211-11k18.4	98	88.194	ENSMALG00000019735	si:ch211-11k18.4	96	88.194	Monopterus_albus
ENSNBRG00000002220	si:ch211-11k18.4	98	96.296	ENSONIG00000019412	si:ch211-11k18.4	96	96.296	Oreochromis_niloticus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.970	ENSONIG00000013568	si:dkey-98f17.5	96	60.970	Oreochromis_niloticus
ENSNBRG00000002220	si:ch211-11k18.4	91	59.649	ENSORLG00000007958	si:dkey-98f17.5	93	59.649	Oryzias_latipes
ENSNBRG00000002220	si:ch211-11k18.4	98	87.269	ENSORLG00000012015	si:ch211-11k18.4	96	87.269	Oryzias_latipes
ENSNBRG00000002220	si:ch211-11k18.4	98	87.037	ENSORLG00020012386	si:ch211-11k18.4	96	87.037	Oryzias_latipes_hni
ENSNBRG00000002220	si:ch211-11k18.4	98	59.122	ENSORLG00020013350	si:dkey-98f17.5	96	59.122	Oryzias_latipes_hni
ENSNBRG00000002220	si:ch211-11k18.4	98	87.500	ENSORLG00015022862	si:ch211-11k18.4	96	87.500	Oryzias_latipes_hsok
ENSNBRG00000002220	si:ch211-11k18.4	98	59.122	ENSORLG00015002000	si:dkey-98f17.5	96	59.122	Oryzias_latipes_hsok
ENSNBRG00000002220	si:ch211-11k18.4	99	58.986	ENSOMEG00000003154	si:dkey-98f17.5	99	58.986	Oryzias_melastigma
ENSNBRG00000002220	si:ch211-11k18.4	98	88.426	ENSOMEG00000018686	si:ch211-11k18.4	96	88.426	Oryzias_melastigma
ENSNBRG00000002220	si:ch211-11k18.4	98	77.546	ENSPKIG00000023918	-	95	77.546	Paramormyrops_kingsleyae
ENSNBRG00000002220	si:ch211-11k18.4	98	60.508	ENSPKIG00000024621	si:dkey-98f17.5	96	60.508	Paramormyrops_kingsleyae
ENSNBRG00000002220	si:ch211-11k18.4	98	80.093	ENSPKIG00000018807	si:ch211-11k18.4	96	80.093	Paramormyrops_kingsleyae
ENSNBRG00000002220	si:ch211-11k18.4	98	87.269	ENSPMGG00000016507	si:ch211-11k18.4	96	87.269	Periophthalmus_magnuspinnatus
ENSNBRG00000002220	si:ch211-11k18.4	98	59.815	ENSPMGG00000019065	si:dkey-98f17.5	96	59.815	Periophthalmus_magnuspinnatus
ENSNBRG00000002220	si:ch211-11k18.4	98	59.633	ENSPFOG00000015142	si:dkey-98f17.5	96	59.633	Poecilia_formosa
ENSNBRG00000002220	si:ch211-11k18.4	98	87.731	ENSPFOG00000007976	si:ch211-11k18.4	96	87.731	Poecilia_formosa
ENSNBRG00000002220	si:ch211-11k18.4	98	87.731	ENSPLAG00000019794	si:ch211-11k18.4	96	87.731	Poecilia_latipinna
ENSNBRG00000002220	si:ch211-11k18.4	98	59.815	ENSPLAG00000003709	si:dkey-98f17.5	96	59.815	Poecilia_latipinna
ENSNBRG00000002220	si:ch211-11k18.4	98	59.815	ENSPMEG00000018709	si:dkey-98f17.5	91	59.815	Poecilia_mexicana
ENSNBRG00000002220	si:ch211-11k18.4	99	87.529	ENSPMEG00000024198	si:ch211-11k18.4	99	87.529	Poecilia_mexicana
ENSNBRG00000002220	si:ch211-11k18.4	98	59.259	ENSPREG00000000708	si:dkey-98f17.5	98	59.259	Poecilia_reticulata
ENSNBRG00000002220	si:ch211-11k18.4	95	82.824	ENSPREG00000015319	si:ch211-11k18.4	97	82.824	Poecilia_reticulata
ENSNBRG00000002220	si:ch211-11k18.4	98	98.380	ENSPNYG00000017099	si:ch211-11k18.4	96	98.380	Pundamilia_nyererei
ENSNBRG00000002220	si:ch211-11k18.4	98	60.739	ENSPNYG00000017266	si:dkey-98f17.5	96	60.739	Pundamilia_nyererei
ENSNBRG00000002220	si:ch211-11k18.4	98	82.870	ENSPNAG00000022138	si:ch211-11k18.4	96	82.870	Pygocentrus_nattereri
ENSNBRG00000002220	si:ch211-11k18.4	98	60.690	ENSPNAG00000021352	si:dkey-98f17.5	96	60.690	Pygocentrus_nattereri
ENSNBRG00000002220	si:ch211-11k18.4	98	58.065	ENSSFOG00015017965	si:dkey-98f17.5	96	58.065	Scleropages_formosus
ENSNBRG00000002220	si:ch211-11k18.4	98	77.083	ENSSFOG00015000985	si:ch211-11k18.4	91	77.083	Scleropages_formosus
ENSNBRG00000002220	si:ch211-11k18.4	99	59.447	ENSSMAG00000011905	si:dkey-98f17.5	98	59.447	Scophthalmus_maximus
ENSNBRG00000002220	si:ch211-11k18.4	98	90.046	ENSSMAG00000009651	si:ch211-11k18.4	96	90.046	Scophthalmus_maximus
ENSNBRG00000002220	si:ch211-11k18.4	98	90.278	ENSSDUG00000016411	si:ch211-11k18.4	96	90.278	Seriola_dumerili
ENSNBRG00000002220	si:ch211-11k18.4	97	59.346	ENSSDUG00000013457	si:dkey-98f17.5	95	59.346	Seriola_dumerili
ENSNBRG00000002220	si:ch211-11k18.4	98	90.046	ENSSLDG00000019145	si:ch211-11k18.4	96	90.046	Seriola_lalandi_dorsalis
ENSNBRG00000002220	si:ch211-11k18.4	97	59.112	ENSSLDG00000025395	si:dkey-98f17.5	95	59.112	Seriola_lalandi_dorsalis
ENSNBRG00000002220	si:ch211-11k18.4	86	66.578	ENSSPUG00000010096	-	95	66.578	Sphenodon_punctatus
ENSNBRG00000002220	si:ch211-11k18.4	98	60.277	ENSSPAG00000018800	si:dkey-98f17.5	96	60.277	Stegastes_partitus
ENSNBRG00000002220	si:ch211-11k18.4	98	91.204	ENSSPAG00000010697	si:ch211-11k18.4	96	91.204	Stegastes_partitus
ENSNBRG00000002220	si:ch211-11k18.4	98	59.353	ENSTRUG00000021287	si:dkey-98f17.5	96	59.353	Takifugu_rubripes
ENSNBRG00000002220	si:ch211-11k18.4	98	86.574	ENSTRUG00000020291	si:ch211-11k18.4	96	86.574	Takifugu_rubripes
ENSNBRG00000002220	si:ch211-11k18.4	98	67.356	ENSXETG00000031783	-	96	67.356	Xenopus_tropicalis
ENSNBRG00000002220	si:ch211-11k18.4	98	81.944	ENSXCOG00000018094	si:ch211-11k18.4	96	80.778	Xiphophorus_couchianus
ENSNBRG00000002220	si:ch211-11k18.4	99	59.773	ENSXCOG00000017002	si:dkey-98f17.5	96	59.909	Xiphophorus_couchianus
ENSNBRG00000002220	si:ch211-11k18.4	98	87.963	ENSXMAG00000021235	si:ch211-11k18.4	96	87.963	Xiphophorus_maculatus
ENSNBRG00000002220	si:ch211-11k18.4	98	59.584	ENSXMAG00000007688	si:dkey-98f17.5	91	59.584	Xiphophorus_maculatus