EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002270 (Gene tree)
Gene ID: 102789608
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 13831 bases
Position: chrJH422306.1:2991895-3005725
Accession: 102789608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002883	zf-RanBP	PF00641.18	2.1e-06	1	1
ENSNBRP00000002857	zf-RanBP	PF00641.18	2.2e-06	1	1
ENSNBRP00000002867	zf-RanBP	PF00641.18	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000002964	-	3979	XM_006794655	ENSNBRP00000002857	711 (aa)	XP_006794718	UPI0003EBC715
ENSNBRT00000002989	-	2055	-	ENSNBRP00000002883	684 (aa)	-	-
ENSNBRT00000002973	-	3979	-	ENSNBRP00000002867	711 (aa)	-	UPI0003EBC715

Gene Model

Click here to download ENSNBRG00000002270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002270	shrprbck1r	65	41.542	ENSNBRG00000006179	rbck1	89	42.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002270	shrprbck1r	100	84.658	ENSAPOG00000022737	shrprbck1r	100	84.240	Acanthochromis_polyacanthus
ENSNBRG00000002270	shrprbck1r	60	57.407	ENSAPOG00000023352	sharpin	95	56.713	Acanthochromis_polyacanthus
ENSNBRG00000002270	shrprbck1r	100	91.280	ENSACIG00000002184	shrprbck1r	100	91.280	Amphilophus_citrinellus
ENSNBRG00000002270	shrprbck1r	100	86.415	ENSAOCG00000002890	shrprbck1r	100	86.134	Amphiprion_ocellaris
ENSNBRG00000002270	shrprbck1r	60	57.639	ENSAOCG00000017464	sharpin	95	56.944	Amphiprion_ocellaris
ENSNBRG00000002270	shrprbck1r	60	57.639	ENSAPEG00000004049	sharpin	95	56.944	Amphiprion_percula
ENSNBRG00000002270	shrprbck1r	100	84.358	ENSAPEG00000023274	shrprbck1r	100	84.078	Amphiprion_percula
ENSNBRG00000002270	shrprbck1r	100	82.419	ENSATEG00000014561	shrprbck1r	100	82.419	Anabas_testudineus
ENSNBRG00000002270	shrprbck1r	60	57.604	ENSATEG00000007832	sharpin	88	56.912	Anabas_testudineus
ENSNBRG00000002270	shrprbck1r	100	98.875	ENSACLG00000022609	shrprbck1r	100	98.875	Astatotilapia_calliptera
ENSNBRG00000002270	shrprbck1r	100	70.204	ENSAMXG00000021016	shrprbck1r	100	70.685	Astyanax_mexicanus
ENSNBRG00000002270	shrprbck1r	55	57.692	ENSAMXG00000006229	sharpin	97	57.692	Astyanax_mexicanus
ENSNBRG00000002270	shrprbck1r	100	76.264	ENSCSEG00000011306	shrprbck1r	100	76.264	Cynoglossus_semilaevis
ENSNBRG00000002270	shrprbck1r	59	55.220	ENSCVAG00000006586	sharpin	95	54.524	Cyprinodon_variegatus
ENSNBRG00000002270	shrprbck1r	100	80.731	ENSCVAG00000007250	shrprbck1r	100	80.028	Cyprinodon_variegatus
ENSNBRG00000002270	shrprbck1r	55	55.784	ENSDARG00000076995	sharpin	94	56.041	Danio_rerio
ENSNBRG00000002270	shrprbck1r	100	70.401	ENSDARG00000059871	shrprbck1r	100	70.816	Danio_rerio
ENSNBRG00000002270	shrprbck1r	100	75.000	ENSELUG00000016022	shrprbck1r	100	75.000	Esox_lucius
ENSNBRG00000002270	shrprbck1r	59	55.452	ENSFHEG00000013564	sharpin	94	54.756	Fundulus_heteroclitus
ENSNBRG00000002270	shrprbck1r	51	60.542	ENSGMOG00000010123	sharpin	91	60.542	Gadus_morhua
ENSNBRG00000002270	shrprbck1r	100	79.184	ENSGAFG00000009309	shrprbck1r	100	78.481	Gambusia_affinis
ENSNBRG00000002270	shrprbck1r	59	44.444	ENSGAFG00000021405	sharpin	95	44.472	Gambusia_affinis
ENSNBRG00000002270	shrprbck1r	75	80.897	ENSGACG00000002544	shrprbck1r	100	79.727	Gasterosteus_aculeatus
ENSNBRG00000002270	shrprbck1r	100	98.875	ENSHBUG00000021933	shrprbck1r	100	98.875	Haplochromis_burtoni
ENSNBRG00000002270	shrprbck1r	62	51.345	ENSHCOG00000018847	sharpin	84	51.570	Hippocampus_comes
ENSNBRG00000002270	shrprbck1r	96	68.687	ENSIPUG00000014247	shrprbck1r	98	66.345	Ictalurus_punctatus
ENSNBRG00000002270	shrprbck1r	51	72.973	ENSIPUG00000011951	sharpin	97	72.973	Ictalurus_punctatus
ENSNBRG00000002270	shrprbck1r	60	56.512	ENSKMAG00000015204	sharpin	76	56.047	Kryptolebias_marmoratus
ENSNBRG00000002270	shrprbck1r	100	78.363	ENSKMAG00000015215	shrprbck1r	100	78.363	Kryptolebias_marmoratus
ENSNBRG00000002270	shrprbck1r	60	58.314	ENSLBEG00000016624	sharpin	96	57.631	Labrus_bergylta
ENSNBRG00000002270	shrprbck1r	100	84.388	ENSLBEG00000016876	shrprbck1r	100	84.388	Labrus_bergylta
ENSNBRG00000002270	shrprbck1r	95	52.770	ENSLACG00000010948	-	97	52.478	Latimeria_chalumnae
ENSNBRG00000002270	shrprbck1r	100	69.188	ENSLOCG00000008910	shrprbck1r	100	69.464	Lepisosteus_oculatus
ENSNBRG00000002270	shrprbck1r	100	82.138	ENSMAMG00000022930	shrprbck1r	100	82.138	Mastacembelus_armatus
ENSNBRG00000002270	shrprbck1r	60	45.588	ENSMAMG00000014645	sharpin	95	46.462	Mastacembelus_armatus
ENSNBRG00000002270	shrprbck1r	100	98.734	ENSMZEG00005021257	shrprbck1r	100	98.734	Maylandia_zebra
ENSNBRG00000002270	shrprbck1r	100	78.103	ENSMMOG00000003764	shrprbck1r	100	78.103	Mola_mola
ENSNBRG00000002270	shrprbck1r	56	52.814	ENSMMOG00000016788	sharpin	75	65.035	Mola_mola
ENSNBRG00000002270	shrprbck1r	95	83.211	ENSMALG00000008861	shrprbck1r	95	83.211	Monopterus_albus
ENSNBRG00000002270	shrprbck1r	57	45.588	ENSMALG00000020528	sharpin	96	45.588	Monopterus_albus
ENSNBRG00000002270	shrprbck1r	100	97.609	ENSONIG00000014401	shrprbck1r	100	97.609	Oreochromis_niloticus
ENSNBRG00000002270	shrprbck1r	55	54.458	ENSONIG00000009626	-	97	54.337	Oreochromis_niloticus
ENSNBRG00000002270	shrprbck1r	60	55.711	ENSORLG00000017281	sharpin	95	55.012	Oryzias_latipes
ENSNBRG00000002270	shrprbck1r	100	79.466	ENSORLG00000007392	shrprbck1r	100	78.903	Oryzias_latipes
ENSNBRG00000002270	shrprbck1r	100	78.903	ENSORLG00020018619	shrprbck1r	100	78.340	Oryzias_latipes_hni
ENSNBRG00000002270	shrprbck1r	60	55.684	ENSORLG00020000801	sharpin	95	54.988	Oryzias_latipes_hni
ENSNBRG00000002270	shrprbck1r	60	55.916	ENSORLG00015009860	sharpin	95	55.220	Oryzias_latipes_hsok
ENSNBRG00000002270	shrprbck1r	100	78.903	ENSORLG00015018865	shrprbck1r	100	78.762	Oryzias_latipes_hsok
ENSNBRG00000002270	shrprbck1r	100	80.731	ENSOMEG00000012749	shrprbck1r	100	80.169	Oryzias_melastigma
ENSNBRG00000002270	shrprbck1r	58	46.500	ENSOMEG00000005729	sharpin	89	50.464	Oryzias_melastigma
ENSNBRG00000002270	shrprbck1r	100	72.841	ENSPKIG00000006933	shrprbck1r	100	72.841	Paramormyrops_kingsleyae
ENSNBRG00000002270	shrprbck1r	65	59.831	ENSPKIG00000018308	-	96	59.619	Paramormyrops_kingsleyae
ENSNBRG00000002270	shrprbck1r	100	77.122	ENSPMGG00000013254	shrprbck1r	100	76.691	Periophthalmus_magnuspinnatus
ENSNBRG00000002270	shrprbck1r	59	55.556	ENSPFOG00000015253	sharpin	95	54.861	Poecilia_formosa
ENSNBRG00000002270	shrprbck1r	100	79.887	ENSPFOG00000004214	shrprbck1r	100	79.184	Poecilia_formosa
ENSNBRG00000002270	shrprbck1r	100	79.747	ENSPLAG00000020523	shrprbck1r	100	79.044	Poecilia_latipinna
ENSNBRG00000002270	shrprbck1r	59	55.787	ENSPLAG00000000423	sharpin	95	55.093	Poecilia_latipinna
ENSNBRG00000002270	shrprbck1r	58	44.444	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSNBRG00000002270	shrprbck1r	100	78.481	ENSPMEG00000006877	shrprbck1r	100	77.778	Poecilia_mexicana
ENSNBRG00000002270	shrprbck1r	100	77.356	ENSPREG00000014689	shrprbck1r	100	76.653	Poecilia_reticulata
ENSNBRG00000002270	shrprbck1r	59	55.452	ENSPREG00000009702	sharpin	95	54.756	Poecilia_reticulata
ENSNBRG00000002270	shrprbck1r	100	99.015	ENSPNYG00000022601	shrprbck1r	100	99.015	Pundamilia_nyererei
ENSNBRG00000002270	shrprbck1r	55	56.522	ENSPNAG00000002911	sharpin	99	56.633	Pygocentrus_nattereri
ENSNBRG00000002270	shrprbck1r	100	68.852	ENSPNAG00000007847	shrprbck1r	100	69.041	Pygocentrus_nattereri
ENSNBRG00000002270	shrprbck1r	58	70.139	ENSSFOG00015004028	sharpin	99	54.691	Scleropages_formosus
ENSNBRG00000002270	shrprbck1r	77	63.429	ENSSFOG00015014150	-	98	62.857	Scleropages_formosus
ENSNBRG00000002270	shrprbck1r	100	80.946	ENSSMAG00000018085	shrprbck1r	100	80.946	Scophthalmus_maximus
ENSNBRG00000002270	shrprbck1r	60	43.722	ENSSDUG00000019039	sharpin	96	43.198	Seriola_dumerili
ENSNBRG00000002270	shrprbck1r	100	86.498	ENSSDUG00000002959	shrprbck1r	100	86.498	Seriola_dumerili
ENSNBRG00000002270	shrprbck1r	100	85.795	ENSSLDG00000009026	shrprbck1r	100	85.795	Seriola_lalandi_dorsalis
ENSNBRG00000002270	shrprbck1r	96	82.923	ENSSPAG00000016097	shrprbck1r	99	82.634	Stegastes_partitus
ENSNBRG00000002270	shrprbck1r	60	53.052	ENSTRUG00000011046	sharpin	96	52.113	Takifugu_rubripes
ENSNBRG00000002270	shrprbck1r	100	79.354	ENSTRUG00000006949	shrprbck1r	100	79.354	Takifugu_rubripes
ENSNBRG00000002270	shrprbck1r	55	55.970	ENSTNIG00000008521	sharpin	94	55.614	Tetraodon_nigroviridis
ENSNBRG00000002270	shrprbck1r	52	56.250	ENSXCOG00000015019	sharpin	96	56.250	Xiphophorus_couchianus
ENSNBRG00000002270	shrprbck1r	100	76.934	ENSXCOG00000006701	shrprbck1r	100	76.231	Xiphophorus_couchianus
ENSNBRG00000002270	shrprbck1r	59	55.889	ENSXMAG00000022076	sharpin	95	55.196	Xiphophorus_maculatus
ENSNBRG00000002270	shrprbck1r	100	76.793	ENSXMAG00000018972	shrprbck1r	100	76.090	Xiphophorus_maculatus