EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000002356 (Gene tree)
Gene ID: 102789313
Gene Symbol: pop1
Alias: -
Full Name: ribonucleases P/MRP protein subunit POP1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 14446 bases
Position: chrJH422314.1:2425982-2440427
Accession: 102789313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002967	POP1	PF06978.11	1.1e-32	1	2
ENSNBRP00000002967	POP1	PF06978.11	1.1e-32	2	2
ENSNBRP00000002967	POPLD	PF08170.12	4.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003075	-	2709	XM_006795970	ENSNBRP00000002967	902 (aa)	XP_006796033	-

Gene Model

Click here to download ENSNBRG00000002356's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002356's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002356	pop1	94	48.514	ENSG00000104356	POP1	89	48.394	Homo_sapiens
ENSNBRG00000002356	pop1	100	74.367	ENSAPOG00000008198	pop1	100	74.367	Acanthochromis_polyacanthus
ENSNBRG00000002356	pop1	94	49.043	ENSAMEG00000000556	POP1	89	48.870	Ailuropoda_melanoleuca
ENSNBRG00000002356	pop1	100	82.878	ENSACIG00000004169	POP1	100	82.878	Amphilophus_citrinellus
ENSNBRG00000002356	pop1	100	74.595	ENSAOCG00000010991	pop1	100	74.595	Amphiprion_ocellaris
ENSNBRG00000002356	pop1	100	74.448	ENSAPEG00000007607	pop1	100	73.845	Amphiprion_percula
ENSNBRG00000002356	pop1	100	69.486	ENSATEG00000024814	POP1	100	70.935	Anabas_testudineus
ENSNBRG00000002356	pop1	94	48.085	ENSAPLG00000014418	POP1	97	48.332	Anas_platyrhynchos
ENSNBRG00000002356	pop1	94	46.752	ENSACAG00000016083	POP1	100	44.146	Anolis_carolinensis
ENSNBRG00000002356	pop1	82	61.277	ENSANAG00000026360	POP1	89	61.161	Aotus_nancymaae
ENSNBRG00000002356	pop1	100	86.890	ENSACLG00000010951	pop1	100	86.890	Astatotilapia_calliptera
ENSNBRG00000002356	pop1	100	54.286	ENSAMXG00000014483	POP1	100	54.089	Astyanax_mexicanus
ENSNBRG00000002356	pop1	94	49.153	ENSBTAG00000012596	POP1	89	48.884	Bos_taurus
ENSNBRG00000002356	pop1	94	48.301	ENSCJAG00000015567	POP1	90	48.339	Callithrix_jacchus
ENSNBRG00000002356	pop1	94	49.394	ENSCAFG00000000469	POP1	89	49.219	Canis_familiaris
ENSNBRG00000002356	pop1	94	48.017	ENSCAFG00020026765	POP1	89	47.831	Canis_lupus_dingo
ENSNBRG00000002356	pop1	89	54.911	ENSCHIG00000017066	POP1	89	48.332	Capra_hircus
ENSNBRG00000002356	pop1	94	48.144	ENSTSYG00000003097	POP1	89	48.176	Carlito_syrichta
ENSNBRG00000002356	pop1	94	47.034	ENSCAPG00000007251	POP1	89	46.945	Cavia_aperea
ENSNBRG00000002356	pop1	94	48.456	ENSCPOG00000002901	POP1	89	48.384	Cavia_porcellus
ENSNBRG00000002356	pop1	94	48.195	ENSCCAG00000018939	POP1	90	48.013	Cebus_capucinus
ENSNBRG00000002356	pop1	93	55.195	ENSCATG00000040916	POP1	82	55.041	Cercocebus_atys
ENSNBRG00000002356	pop1	94	49.095	ENSCLAG00000007208	POP1	86	48.922	Chinchilla_lanigera
ENSNBRG00000002356	pop1	95	48.051	ENSCSAG00000012340	POP1	98	48.283	Chlorocebus_sabaeus
ENSNBRG00000002356	pop1	94	46.731	ENSCHOG00000011432	POP1	93	46.855	Choloepus_hoffmanni
ENSNBRG00000002356	pop1	100	47.322	ENSCPBG00000006373	POP1	100	47.517	Chrysemys_picta_bellii
ENSNBRG00000002356	pop1	89	31.818	ENSCING00000008323	-	93	31.818	Ciona_intestinalis
ENSNBRG00000002356	pop1	94	47.983	ENSCANG00000001647	POP1	89	47.798	Colobus_angolensis_palliatus
ENSNBRG00000002356	pop1	93	48.310	ENSCGRG00001017308	Pop1	89	48.310	Cricetulus_griseus_chok1gshd
ENSNBRG00000002356	pop1	100	44.049	ENSCGRG00000010824	Pop1	100	44.037	Cricetulus_griseus_crigri
ENSNBRG00000002356	pop1	100	65.524	ENSCSEG00000008737	POP1	100	65.524	Cynoglossus_semilaevis
ENSNBRG00000002356	pop1	100	67.074	ENSCVAG00000022248	pop1	100	67.074	Cyprinodon_variegatus
ENSNBRG00000002356	pop1	50	51.867	ENSDARG00000102087	pop1	99	52.282	Danio_rerio
ENSNBRG00000002356	pop1	94	45.605	ENSDNOG00000019974	POP1	89	45.607	Dasypus_novemcinctus
ENSNBRG00000002356	pop1	94	44.275	ENSDORG00000015384	Pop1	88	44.740	Dipodomys_ordii
ENSNBRG00000002356	pop1	85	46.931	ENSETEG00000007839	POP1	77	48.802	Echinops_telfairi
ENSNBRG00000002356	pop1	50	37.190	ENSEBUG00000014694	-	98	37.603	Eptatretus_burgeri
ENSNBRG00000002356	pop1	94	48.556	ENSEASG00005003189	POP1	88	48.485	Equus_asinus_asinus
ENSNBRG00000002356	pop1	94	47.886	ENSECAG00000024236	POP1	89	48.759	Equus_caballus
ENSNBRG00000002356	pop1	54	80.303	ENSEEUG00000003050	-	53	80.303	Erinaceus_europaeus
ENSNBRG00000002356	pop1	100	59.109	ENSELUG00000003526	pop1	100	59.312	Esox_lucius
ENSNBRG00000002356	pop1	94	48.291	ENSFCAG00000002168	POP1	89	48.272	Felis_catus
ENSNBRG00000002356	pop1	100	45.587	ENSFALG00000005711	POP1	89	48.048	Ficedula_albicollis
ENSNBRG00000002356	pop1	94	47.418	ENSFDAG00000017068	POP1	89	47.335	Fukomys_damarensis
ENSNBRG00000002356	pop1	100	67.418	ENSFHEG00000019518	pop1	100	67.623	Fundulus_heteroclitus
ENSNBRG00000002356	pop1	100	59.563	ENSGMOG00000000659	POP1	100	60.125	Gadus_morhua
ENSNBRG00000002356	pop1	100	65.891	ENSGAFG00000019770	POP1	100	66.599	Gambusia_affinis
ENSNBRG00000002356	pop1	100	61.201	ENSGACG00000003499	pop1	92	83.333	Gasterosteus_aculeatus
ENSNBRG00000002356	pop1	94	49.946	ENSGAGG00000011737	POP1	87	49.781	Gopherus_agassizii
ENSNBRG00000002356	pop1	94	48.462	ENSGGOG00000003176	POP1	89	48.501	Gorilla_gorilla
ENSNBRG00000002356	pop1	100	87.398	ENSHBUG00000021583	pop1	100	87.398	Haplochromis_burtoni
ENSNBRG00000002356	pop1	93	47.564	ENSHGLG00000006029	POP1	89	48.397	Heterocephalus_glaber_female
ENSNBRG00000002356	pop1	93	47.564	ENSHGLG00100016879	POP1	89	48.397	Heterocephalus_glaber_male
ENSNBRG00000002356	pop1	100	64.367	ENSHCOG00000013888	pop1	100	64.367	Hippocampus_comes
ENSNBRG00000002356	pop1	100	52.720	ENSIPUG00000018336	pop1	100	52.480	Ictalurus_punctatus
ENSNBRG00000002356	pop1	94	48.046	ENSSTOG00000011455	POP1	86	47.863	Ictidomys_tridecemlineatus
ENSNBRG00000002356	pop1	94	47.817	ENSJJAG00000013325	Pop1	88	47.845	Jaculus_jaculus
ENSNBRG00000002356	pop1	100	68.789	ENSKMAG00000001346	POP1	100	69.097	Kryptolebias_marmoratus
ENSNBRG00000002356	pop1	100	64.921	ENSLBEG00000024457	POP1	100	65.550	Labrus_bergylta
ENSNBRG00000002356	pop1	94	50.157	ENSLACG00000012498	POP1	95	50.370	Latimeria_chalumnae
ENSNBRG00000002356	pop1	100	51.509	ENSLOCG00000009817	POP1	100	51.996	Lepisosteus_oculatus
ENSNBRG00000002356	pop1	94	49.573	ENSLAFG00000010770	POP1	89	49.569	Loxodonta_africana
ENSNBRG00000002356	pop1	93	55.357	ENSMFAG00000000347	POP1	82	55.207	Macaca_fascicularis
ENSNBRG00000002356	pop1	93	55.357	ENSMNEG00000036870	POP1	82	55.207	Macaca_nemestrina
ENSNBRG00000002356	pop1	93	55.357	ENSMLEG00000034986	POP1	82	55.207	Mandrillus_leucophaeus
ENSNBRG00000002356	pop1	100	69.939	ENSMAMG00000004040	pop1	100	70.404	Mastacembelus_armatus
ENSNBRG00000002356	pop1	100	86.992	ENSMZEG00005025448	pop1	100	86.992	Maylandia_zebra
ENSNBRG00000002356	pop1	100	45.033	ENSMGAG00000012167	POP1	100	45.128	Meleagris_gallopavo
ENSNBRG00000002356	pop1	94	48.280	ENSMAUG00000017537	Pop1	89	48.096	Mesocricetus_auratus
ENSNBRG00000002356	pop1	94	47.775	ENSMICG00000004361	POP1	89	47.588	Microcebus_murinus
ENSNBRG00000002356	pop1	94	48.339	ENSMOCG00000006356	Pop1	89	48.482	Microtus_ochrogaster
ENSNBRG00000002356	pop1	100	70.511	ENSMMOG00000018242	pop1	100	70.479	Mola_mola
ENSNBRG00000002356	pop1	94	46.984	ENSMODG00000006561	POP1	88	47.002	Monodelphis_domestica
ENSNBRG00000002356	pop1	100	69.725	ENSMALG00000012621	POP1	100	70.336	Monopterus_albus
ENSNBRG00000002356	pop1	94	46.365	MGP_CAROLIEiJ_G0019726	Pop1	89	47.097	Mus_caroli
ENSNBRG00000002356	pop1	94	46.978	ENSMUSG00000022325	Pop1	89	46.674	Mus_musculus
ENSNBRG00000002356	pop1	94	46.895	MGP_PahariEiJ_G0019735	Pop1	89	46.696	Mus_pahari
ENSNBRG00000002356	pop1	94	46.504	MGP_SPRETEiJ_G0020622	Pop1	89	46.919	Mus_spretus
ENSNBRG00000002356	pop1	94	49.520	ENSMPUG00000015250	POP1	89	49.352	Mustela_putorius_furo
ENSNBRG00000002356	pop1	94	46.652	ENSMLUG00000010204	POP1	89	46.479	Myotis_lucifugus
ENSNBRG00000002356	pop1	99	47.475	ENSNGAG00000001582	Pop1	89	48.605	Nannospalax_galili
ENSNBRG00000002356	pop1	94	48.301	ENSNLEG00000002541	POP1	89	48.180	Nomascus_leucogenys
ENSNBRG00000002356	pop1	81	53.355	ENSMEUG00000003118	POP1	79	52.980	Notamacropus_eugenii
ENSNBRG00000002356	pop1	94	48.605	ENSOPRG00000007667	POP1	89	48.426	Ochotona_princeps
ENSNBRG00000002356	pop1	93	48.712	ENSODEG00000003984	POP1	89	48.712	Octodon_degus
ENSNBRG00000002356	pop1	100	86.714	ENSONIG00000016445	pop1	100	86.714	Oreochromis_niloticus
ENSNBRG00000002356	pop1	66	39.340	ENSOANG00000001278	-	78	41.899	Ornithorhynchus_anatinus
ENSNBRG00000002356	pop1	94	47.881	ENSOCUG00000017400	POP1	89	48.021	Oryctolagus_cuniculus
ENSNBRG00000002356	pop1	100	66.804	ENSORLG00000002839	pop1	100	66.906	Oryzias_latipes
ENSNBRG00000002356	pop1	100	66.979	ENSORLG00020022450	POP1	100	67.188	Oryzias_latipes_hni
ENSNBRG00000002356	pop1	100	67.146	ENSORLG00015012746	POP1	100	67.351	Oryzias_latipes_hsok
ENSNBRG00000002356	pop1	100	65.302	ENSOMEG00000006915	pop1	99	66.187	Oryzias_melastigma
ENSNBRG00000002356	pop1	94	47.424	ENSOGAG00000001466	POP1	89	47.854	Otolemur_garnettii
ENSNBRG00000002356	pop1	94	48.514	ENSPPAG00000018410	POP1	89	48.180	Pan_paniscus
ENSNBRG00000002356	pop1	94	47.872	ENSPPRG00000005002	POP1	89	47.793	Panthera_pardus
ENSNBRG00000002356	pop1	94	48.294	ENSPTIG00000016527	POP1	89	48.276	Panthera_tigris_altaica
ENSNBRG00000002356	pop1	94	48.514	ENSPTRG00000020458	POP1	89	48.394	Pan_troglodytes
ENSNBRG00000002356	pop1	93	55.519	ENSPANG00000009704	POP1	82	55.372	Papio_anubis
ENSNBRG00000002356	pop1	100	54.771	ENSPKIG00000016325	POP1	100	55.511	Paramormyrops_kingsleyae
ENSNBRG00000002356	pop1	100	45.761	ENSPSIG00000012343	POP1	100	46.243	Pelodiscus_sinensis
ENSNBRG00000002356	pop1	100	62.204	ENSPMGG00000022253	POP1	100	62.101	Periophthalmus_magnuspinnatus
ENSNBRG00000002356	pop1	94	47.225	ENSPEMG00000023633	Pop1	89	47.034	Peromyscus_maniculatus_bairdii
ENSNBRG00000002356	pop1	94	42.116	ENSPMAG00000003209	POP1	99	41.925	Petromyzon_marinus
ENSNBRG00000002356	pop1	94	45.992	ENSPCIG00000012216	POP1	88	46.398	Phascolarctos_cinereus
ENSNBRG00000002356	pop1	97	75.000	ENSPFOG00000012490	POP1	92	75.000	Poecilia_formosa
ENSNBRG00000002356	pop1	100	65.412	ENSPLAG00000004646	POP1	100	65.412	Poecilia_latipinna
ENSNBRG00000002356	pop1	100	65.679	ENSPMEG00000019592	POP1	100	65.271	Poecilia_mexicana
ENSNBRG00000002356	pop1	100	64.358	ENSPREG00000020951	POP1	100	65.283	Poecilia_reticulata
ENSNBRG00000002356	pop1	94	48.199	ENSPPYG00000018777	POP1	89	48.077	Pongo_abelii
ENSNBRG00000002356	pop1	94	46.113	ENSPCAG00000016662	POP1	89	45.905	Procavia_capensis
ENSNBRG00000002356	pop1	94	47.826	ENSPCOG00000019420	POP1	89	47.639	Propithecus_coquereli
ENSNBRG00000002356	pop1	94	47.609	ENSPVAG00000014468	POP1	89	47.747	Pteropus_vampyrus
ENSNBRG00000002356	pop1	100	93.661	ENSPNYG00000004476	pop1	100	93.661	Pundamilia_nyererei
ENSNBRG00000002356	pop1	100	53.603	ENSPNAG00000000265	pop1	100	53.406	Pygocentrus_nattereri
ENSNBRG00000002356	pop1	94	47.380	ENSRNOG00000005243	Pop1	89	47.403	Rattus_norvegicus
ENSNBRG00000002356	pop1	93	55.519	ENSRBIG00000007996	POP1	82	55.372	Rhinopithecus_bieti
ENSNBRG00000002356	pop1	93	55.519	ENSRROG00000012334	POP1	82	55.372	Rhinopithecus_roxellana
ENSNBRG00000002356	pop1	94	48.038	ENSSBOG00000020830	POP1	90	47.854	Saimiri_boliviensis_boliviensis
ENSNBRG00000002356	pop1	94	46.815	ENSSHAG00000000296	POP1	88	46.875	Sarcophilus_harrisii
ENSNBRG00000002356	pop1	100	56.142	ENSSFOG00015007429	pop1	99	55.826	Scleropages_formosus
ENSNBRG00000002356	pop1	100	72.406	ENSSMAG00000010467	POP1	100	72.756	Scophthalmus_maximus
ENSNBRG00000002356	pop1	100	71.198	ENSSDUG00000007817	POP1	100	71.774	Seriola_dumerili
ENSNBRG00000002356	pop1	100	71.472	ENSSLDG00000012565	POP1	100	72.105	Seriola_lalandi_dorsalis
ENSNBRG00000002356	pop1	100	42.940	ENSSPUG00000003550	-	100	42.995	Sphenodon_punctatus
ENSNBRG00000002356	pop1	100	75.971	ENSSPAG00000014955	pop1	100	75.971	Stegastes_partitus
ENSNBRG00000002356	pop1	94	48.332	ENSSSCG00000006078	POP1	89	48.148	Sus_scrofa
ENSNBRG00000002356	pop1	94	43.301	ENSTGUG00000012011	-	97	43.431	Taeniopygia_guttata
ENSNBRG00000002356	pop1	100	66.597	ENSTRUG00000010856	pop1	100	66.597	Takifugu_rubripes
ENSNBRG00000002356	pop1	94	65.628	ENSTNIG00000013297	pop1	95	65.652	Tetraodon_nigroviridis
ENSNBRG00000002356	pop1	94	45.590	ENSTBEG00000014214	POP1	93	45.376	Tupaia_belangeri
ENSNBRG00000002356	pop1	94	47.543	ENSTTRG00000016071	POP1	89	47.306	Tursiops_truncatus
ENSNBRG00000002356	pop1	94	48.827	ENSUAMG00000017309	POP1	93	48.652	Ursus_americanus
ENSNBRG00000002356	pop1	86	59.236	ENSUMAG00000016952	POP1	88	58.904	Ursus_maritimus
ENSNBRG00000002356	pop1	79	61.404	ENSVPAG00000008278	POP1	71	61.250	Vicugna_pacos
ENSNBRG00000002356	pop1	94	47.910	ENSVVUG00000010994	POP1	89	47.722	Vulpes_vulpes
ENSNBRG00000002356	pop1	100	60.061	ENSXCOG00000017043	POP1	100	60.776	Xiphophorus_couchianus
ENSNBRG00000002356	pop1	100	65.385	ENSXMAG00000002472	POP1	100	65.486	Xiphophorus_maculatus