EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002401 (Gene tree)
Gene ID: 102781218
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 13253 bases
Position: chrJH422404.1:84348-97600
Accession: 102781218
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000002978	Not3	PF04065.15	4.4e-97	1	1
ENSNBRP00000002978	NOT2_3_5	PF04153.18	1.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003087	-	6629	XM_006804812	ENSNBRP00000002978	892 (aa)	XP_006804875	UPI0003EC0DDA

Gene Model

Click here to download ENSNBRG00000002401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002401	cnot3a	78	86.992	ENSNBRG00000003336	cnot3b	89	86.992

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002401	cnot3a	63	90.157	ENSG00000088038	CNOT3	100	93.814	Homo_sapiens
ENSNBRG00000002401	cnot3a	59	90.391	ENSAPOG00000015499	CNOT3	92	90.391	Acanthochromis_polyacanthus
ENSNBRG00000002401	cnot3a	55	90.119	ENSAPOG00000015002	cnot3b	69	89.177	Acanthochromis_polyacanthus
ENSNBRG00000002401	cnot3a	63	90.551	ENSAMEG00000004528	CNOT3	78	90.551	Ailuropoda_melanoleuca
ENSNBRG00000002401	cnot3a	100	95.624	ENSACIG00000006635	cnot3a	100	95.951	Amphilophus_citrinellus
ENSNBRG00000002401	cnot3a	97	59.628	ENSAOCG00000018385	-	88	76.786	Amphiprion_ocellaris
ENSNBRG00000002401	cnot3a	99	88.675	ENSAOCG00000023769	cnot3a	99	89.593	Amphiprion_ocellaris
ENSNBRG00000002401	cnot3a	100	92.825	ENSAPEG00000006624	cnot3a	100	91.816	Amphiprion_percula
ENSNBRG00000002401	cnot3a	97	62.227	ENSAPEG00000002640	cnot3b	80	85.593	Amphiprion_percula
ENSNBRG00000002401	cnot3a	100	92.161	ENSATEG00000022737	cnot3a	100	92.721	Anabas_testudineus
ENSNBRG00000002401	cnot3a	68	83.442	ENSACAG00000016085	CNOT3	81	90.157	Anolis_carolinensis
ENSNBRG00000002401	cnot3a	63	90.157	ENSANAG00000025756	CNOT3	78	90.157	Aotus_nancymaae
ENSNBRG00000002401	cnot3a	100	99.664	ENSACLG00000021136	cnot3a	100	99.664	Astatotilapia_calliptera
ENSNBRG00000002401	cnot3a	100	66.631	ENSAMXG00000009447	cnot3b	64	91.351	Astyanax_mexicanus
ENSNBRG00000002401	cnot3a	100	71.627	ENSAMXG00000012359	cnot3a	61	67.336	Astyanax_mexicanus
ENSNBRG00000002401	cnot3a	63	90.157	ENSBTAG00000014900	CNOT3	79	90.157	Bos_taurus
ENSNBRG00000002401	cnot3a	63	90.157	ENSCJAG00000001094	CNOT3	78	90.157	Callithrix_jacchus
ENSNBRG00000002401	cnot3a	63	90.157	ENSCAFG00000002699	CNOT3	78	90.157	Canis_familiaris
ENSNBRG00000002401	cnot3a	63	90.157	ENSCAFG00020018359	CNOT3	78	90.157	Canis_lupus_dingo
ENSNBRG00000002401	cnot3a	58	87.747	ENSCHIG00000015302	CNOT3	70	87.747	Capra_hircus
ENSNBRG00000002401	cnot3a	63	90.157	ENSTSYG00000008058	CNOT3	78	90.157	Carlito_syrichta
ENSNBRG00000002401	cnot3a	100	56.229	ENSCAPG00000009533	CNOT3	78	90.157	Cavia_aperea
ENSNBRG00000002401	cnot3a	76	70.127	ENSCPOG00000020741	CNOT3	78	90.157	Cavia_porcellus
ENSNBRG00000002401	cnot3a	63	90.157	ENSCCAG00000036290	CNOT3	78	90.157	Cebus_capucinus
ENSNBRG00000002401	cnot3a	66	89.928	ENSCATG00000030324	CNOT3	78	90.157	Cercocebus_atys
ENSNBRG00000002401	cnot3a	71	90.157	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSNBRG00000002401	cnot3a	66	89.928	ENSCSAG00000001900	CNOT3	78	90.157	Chlorocebus_sabaeus
ENSNBRG00000002401	cnot3a	65	90.157	ENSCPBG00000011655	CNOT3	81	90.157	Chrysemys_picta_bellii
ENSNBRG00000002401	cnot3a	57	67.769	ENSCING00000000293	-	71	67.769	Ciona_intestinalis
ENSNBRG00000002401	cnot3a	66	89.928	ENSCANG00000013408	CNOT3	78	90.157	Colobus_angolensis_palliatus
ENSNBRG00000002401	cnot3a	63	90.551	ENSCGRG00001000855	Cnot3	78	90.551	Cricetulus_griseus_chok1gshd
ENSNBRG00000002401	cnot3a	100	91.060	ENSCSEG00000003574	cnot3a	100	91.943	Cynoglossus_semilaevis
ENSNBRG00000002401	cnot3a	79	83.972	ENSCSEG00000016892	cnot3b	65	86.328	Cynoglossus_semilaevis
ENSNBRG00000002401	cnot3a	100	87.556	ENSCVAG00000008168	cnot3a	100	87.444	Cyprinodon_variegatus
ENSNBRG00000002401	cnot3a	100	73.885	ENSDARG00000007135	cnot3a	100	72.579	Danio_rerio
ENSNBRG00000002401	cnot3a	63	90.157	ENSDNOG00000045972	CNOT3	78	90.157	Dasypus_novemcinctus
ENSNBRG00000002401	cnot3a	63	90.157	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSNBRG00000002401	cnot3a	50	66.667	FBgn0033029	Not3	50	67.323	Drosophila_melanogaster
ENSNBRG00000002401	cnot3a	51	100.000	ENSETEG00000006305	CNOT3	57	100.000	Echinops_telfairi
ENSNBRG00000002401	cnot3a	68	75.581	ENSEBUG00000010437	cnot3a	76	75.969	Eptatretus_burgeri
ENSNBRG00000002401	cnot3a	63	90.157	ENSEASG00005021591	CNOT3	78	90.157	Equus_asinus_asinus
ENSNBRG00000002401	cnot3a	63	90.157	ENSECAG00000023181	CNOT3	78	90.157	Equus_caballus
ENSNBRG00000002401	cnot3a	100	78.549	ENSELUG00000014743	cnot3a	100	79.380	Esox_lucius
ENSNBRG00000002401	cnot3a	63	90.157	ENSFCAG00000014042	CNOT3	79	90.157	Felis_catus
ENSNBRG00000002401	cnot3a	100	83.662	ENSFHEG00000023166	cnot3a	96	98.718	Fundulus_heteroclitus
ENSNBRG00000002401	cnot3a	94	78.447	ENSGMOG00000005365	cnot3a	98	77.549	Gadus_morhua
ENSNBRG00000002401	cnot3a	100	86.952	ENSGAFG00000013094	cnot3a	100	86.294	Gambusia_affinis
ENSNBRG00000002401	cnot3a	94	79.953	ENSGACG00000011489	cnot3a	98	81.352	Gasterosteus_aculeatus
ENSNBRG00000002401	cnot3a	65	88.235	ENSGAGG00000012677	CNOT3	81	88.235	Gopherus_agassizii
ENSNBRG00000002401	cnot3a	63	90.157	ENSGGOG00000012996	CNOT3	78	90.157	Gorilla_gorilla
ENSNBRG00000002401	cnot3a	100	99.776	ENSHBUG00000005275	cnot3a	100	99.776	Haplochromis_burtoni
ENSNBRG00000002401	cnot3a	66	89.928	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSNBRG00000002401	cnot3a	61	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSNBRG00000002401	cnot3a	100	84.427	ENSHCOG00000020968	cnot3a	100	85.762	Hippocampus_comes
ENSNBRG00000002401	cnot3a	63	90.157	ENSSTOG00000028248	CNOT3	78	90.157	Ictidomys_tridecemlineatus
ENSNBRG00000002401	cnot3a	63	90.551	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSNBRG00000002401	cnot3a	100	89.083	ENSKMAG00000004863	cnot3a	100	90.217	Kryptolebias_marmoratus
ENSNBRG00000002401	cnot3a	96	63.755	ENSLBEG00000018278	cnot3b	66	89.453	Labrus_bergylta
ENSNBRG00000002401	cnot3a	83	95.928	ENSLBEG00000017296	cnot3a	68	97.133	Labrus_bergylta
ENSNBRG00000002401	cnot3a	67	87.500	ENSLACG00000009742	CNOT3	81	88.189	Latimeria_chalumnae
ENSNBRG00000002401	cnot3a	51	94.611	ENSLOCG00000000005	cnot3b	71	92.308	Lepisosteus_oculatus
ENSNBRG00000002401	cnot3a	63	89.804	ENSLAFG00000022133	CNOT3	78	89.804	Loxodonta_africana
ENSNBRG00000002401	cnot3a	63	90.157	ENSMFAG00000040073	CNOT3	78	90.157	Macaca_fascicularis
ENSNBRG00000002401	cnot3a	61	92.437	ENSMMUG00000009698	CNOT3	100	95.098	Macaca_mulatta
ENSNBRG00000002401	cnot3a	66	89.928	ENSMNEG00000036750	CNOT3	78	90.157	Macaca_nemestrina
ENSNBRG00000002401	cnot3a	63	90.157	ENSMLEG00000036579	CNOT3	78	90.157	Mandrillus_leucophaeus
ENSNBRG00000002401	cnot3a	99	91.073	ENSMAMG00000019397	cnot3a	99	91.412	Mastacembelus_armatus
ENSNBRG00000002401	cnot3a	100	99.664	ENSMZEG00005016304	cnot3a	100	99.664	Maylandia_zebra
ENSNBRG00000002401	cnot3a	63	90.551	ENSMAUG00000014996	Cnot3	78	90.551	Mesocricetus_auratus
ENSNBRG00000002401	cnot3a	63	90.157	ENSMICG00000002370	CNOT3	78	90.157	Microcebus_murinus
ENSNBRG00000002401	cnot3a	62	90.171	ENSMMOG00000013086	cnot3b	75	85.944	Mola_mola
ENSNBRG00000002401	cnot3a	100	87.500	ENSMMOG00000016446	cnot3a	100	88.816	Mola_mola
ENSNBRG00000002401	cnot3a	58	89.928	ENSMODG00000004066	CNOT3	66	90.157	Monodelphis_domestica
ENSNBRG00000002401	cnot3a	100	89.133	ENSMALG00000009204	cnot3a	100	89.023	Monopterus_albus
ENSNBRG00000002401	cnot3a	55	86.400	ENSMALG00000004936	cnot3b	70	86.400	Monopterus_albus
ENSNBRG00000002401	cnot3a	63	90.551	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSNBRG00000002401	cnot3a	63	90.551	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSNBRG00000002401	cnot3a	77	69.383	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSNBRG00000002401	cnot3a	63	90.551	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSNBRG00000002401	cnot3a	66	89.928	ENSMPUG00000010352	CNOT3	78	90.157	Mustela_putorius_furo
ENSNBRG00000002401	cnot3a	63	90.157	ENSNGAG00000013266	Cnot3	78	90.157	Nannospalax_galili
ENSNBRG00000002401	cnot3a	66	89.928	ENSNLEG00000006272	CNOT3	77	90.157	Nomascus_leucogenys
ENSNBRG00000002401	cnot3a	98	63.988	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSNBRG00000002401	cnot3a	100	96.714	ENSONIG00000006568	cnot3a	100	96.714	Oreochromis_niloticus
ENSNBRG00000002401	cnot3a	63	90.157	ENSOCUG00000007691	CNOT3	78	90.157	Oryctolagus_cuniculus
ENSNBRG00000002401	cnot3a	100	88.364	ENSORLG00000011174	cnot3a	100	87.816	Oryzias_latipes
ENSNBRG00000002401	cnot3a	100	87.842	ENSORLG00020008009	cnot3a	100	87.514	Oryzias_latipes_hni
ENSNBRG00000002401	cnot3a	100	88.255	ENSORLG00015013729	cnot3a	100	87.267	Oryzias_latipes_hsok
ENSNBRG00000002401	cnot3a	100	89.145	ENSOMEG00000010309	cnot3a	100	88.816	Oryzias_melastigma
ENSNBRG00000002401	cnot3a	77	69.231	ENSOGAG00000006945	CNOT3	78	90.157	Otolemur_garnettii
ENSNBRG00000002401	cnot3a	51	91.444	ENSOARG00000002981	CNOT3	66	91.444	Ovis_aries
ENSNBRG00000002401	cnot3a	63	90.157	ENSPPAG00000002748	CNOT3	78	90.157	Pan_paniscus
ENSNBRG00000002401	cnot3a	63	90.157	ENSPPRG00000011705	CNOT3	79	90.157	Panthera_pardus
ENSNBRG00000002401	cnot3a	61	89.928	ENSPTIG00000008781	CNOT3	88	90.157	Panthera_tigris_altaica
ENSNBRG00000002401	cnot3a	63	90.157	ENSPTRG00000046717	-	78	90.157	Pan_troglodytes
ENSNBRG00000002401	cnot3a	63	90.157	ENSPTRG00000011444	CNOT3	78	90.157	Pan_troglodytes
ENSNBRG00000002401	cnot3a	66	89.928	ENSPANG00000009375	CNOT3	78	90.157	Papio_anubis
ENSNBRG00000002401	cnot3a	68	94.872	ENSPKIG00000015967	-	90	89.020	Paramormyrops_kingsleyae
ENSNBRG00000002401	cnot3a	100	65.367	ENSPKIG00000011733	CNOT3	78	56.130	Paramormyrops_kingsleyae
ENSNBRG00000002401	cnot3a	63	90.551	ENSPEMG00000024185	Cnot3	78	90.551	Peromyscus_maniculatus_bairdii
ENSNBRG00000002401	cnot3a	67	89.568	ENSPCIG00000023018	CNOT3	88	89.764	Phascolarctos_cinereus
ENSNBRG00000002401	cnot3a	100	86.433	ENSPFOG00000008693	cnot3a	89	97.491	Poecilia_formosa
ENSNBRG00000002401	cnot3a	100	86.842	ENSPLAG00000013324	cnot3a	100	86.294	Poecilia_latipinna
ENSNBRG00000002401	cnot3a	100	87.185	ENSPMEG00000017718	cnot3a	100	86.528	Poecilia_mexicana
ENSNBRG00000002401	cnot3a	100	84.022	ENSPREG00000007592	cnot3a	100	95.142	Poecilia_reticulata
ENSNBRG00000002401	cnot3a	63	89.764	ENSPPYG00000010372	CNOT3	78	89.764	Pongo_abelii
ENSNBRG00000002401	cnot3a	63	90.157	ENSPCOG00000017673	CNOT3	79	90.157	Propithecus_coquereli
ENSNBRG00000002401	cnot3a	63	89.764	ENSPVAG00000015564	CNOT3	78	89.764	Pteropus_vampyrus
ENSNBRG00000002401	cnot3a	100	99.664	ENSPNYG00000002282	cnot3a	100	99.664	Pundamilia_nyererei
ENSNBRG00000002401	cnot3a	100	70.614	ENSPNAG00000017679	cnot3a	64	93.061	Pygocentrus_nattereri
ENSNBRG00000002401	cnot3a	63	90.551	ENSRNOG00000053234	Cnot3	78	90.551	Rattus_norvegicus
ENSNBRG00000002401	cnot3a	77	69.231	ENSRBIG00000031025	CNOT3	78	90.157	Rhinopithecus_bieti
ENSNBRG00000002401	cnot3a	77	69.479	ENSRROG00000003872	CNOT3	79	90.157	Rhinopithecus_roxellana
ENSNBRG00000002401	cnot3a	71	90.157	ENSSBOG00000030268	CNOT3	78	90.157	Saimiri_boliviensis_boliviensis
ENSNBRG00000002401	cnot3a	100	68.541	ENSSFOG00015000248	cnot3	100	65.484	Scleropages_formosus
ENSNBRG00000002401	cnot3a	100	92.436	ENSSMAG00000013235	cnot3a	100	92.770	Scophthalmus_maximus
ENSNBRG00000002401	cnot3a	100	90.591	ENSSDUG00000008181	cnot3a	100	95.547	Seriola_dumerili
ENSNBRG00000002401	cnot3a	96	94.890	ENSSLDG00000014733	cnot3a	99	94.890	Seriola_lalandi_dorsalis
ENSNBRG00000002401	cnot3a	68	83.442	ENSSPUG00000008510	CNOT3	82	90.157	Sphenodon_punctatus
ENSNBRG00000002401	cnot3a	96	94.890	ENSSPAG00000003858	cnot3a	98	95.470	Stegastes_partitus
ENSNBRG00000002401	cnot3a	63	90.157	ENSSSCG00000003264	CNOT3	78	90.157	Sus_scrofa
ENSNBRG00000002401	cnot3a	100	89.133	ENSTRUG00000015732	cnot3a	100	89.243	Takifugu_rubripes
ENSNBRG00000002401	cnot3a	63	90.551	ENSUAMG00000005234	CNOT3	78	90.551	Ursus_americanus
ENSNBRG00000002401	cnot3a	61	88.849	ENSUMAG00000010934	CNOT3	89	92.857	Ursus_maritimus
ENSNBRG00000002401	cnot3a	63	90.157	ENSVVUG00000008239	CNOT3	77	90.157	Vulpes_vulpes
ENSNBRG00000002401	cnot3a	70	88.235	ENSXETG00000003166	cnot3	81	89.804	Xenopus_tropicalis
ENSNBRG00000002401	cnot3a	100	79.759	ENSXCOG00000019460	cnot3a	97	99.145	Xiphophorus_couchianus
ENSNBRG00000002401	cnot3a	100	85.840	ENSXMAG00000012273	cnot3a	100	84.320	Xiphophorus_maculatus