EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002422 (Gene tree)
Gene ID: 102796260
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 14613 bases
Position: chrJH422291.1:5973921-5988533
Accession: 102796260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003020	MMR_HSR1	PF01926.23	2.1e-08	1	1
ENSNBRP00000003007	MMR_HSR1	PF01926.23	2.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003116	SRL (1 of many)-201	2815	XM_006790785	ENSNBRP00000003007	802 (aa)	XP_006790848	-
ENSNBRT00000003129	SRL (1 of many)-202	2725	XM_006790787	ENSNBRP00000003020	772 (aa)	XP_006790850	-

Gene Model

Click here to download ENSNBRG00000002422's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002422's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002422	SRL	54	31.566	ENSNBRG00000022623	ehd4	68	32.474
ENSNBRG00000002422	SRL	60	72.671	ENSNBRG00000023775	srl	99	72.671
ENSNBRG00000002422	SRL	54	30.120	ENSNBRG00000002933	ehd1a	71	30.256
ENSNBRG00000002422	SRL	52	31.188	ENSNBRG00000022653	ehd3	71	31.313

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002422	SRL	60	69.330	ENSG00000185739	SRL	99	72.789	Homo_sapiens
ENSNBRG00000002422	SRL	56	76.157	ENSAPOG00000018093	srl	99	74.670	Acanthochromis_polyacanthus
ENSNBRG00000002422	SRL	64	82.364	ENSAPOG00000012432	SRL	99	86.184	Acanthochromis_polyacanthus
ENSNBRG00000002422	SRL	57	72.308	ENSAMEG00000010862	SRL	51	69.510	Ailuropoda_melanoleuca
ENSNBRG00000002422	SRL	57	88.961	ENSACIG00000015419	SRL	100	88.961	Amphilophus_citrinellus
ENSNBRG00000002422	SRL	58	74.730	ENSACIG00000015799	srl	99	74.514	Amphilophus_citrinellus
ENSNBRG00000002422	SRL	56	75.926	ENSAOCG00000007574	srl	100	74.720	Amphiprion_ocellaris
ENSNBRG00000002422	SRL	58	85.470	ENSAOCG00000017049	SRL	99	86.538	Amphiprion_ocellaris
ENSNBRG00000002422	SRL	58	81.197	ENSAPEG00000006533	SRL	99	82.479	Amphiprion_percula
ENSNBRG00000002422	SRL	56	75.926	ENSAPEG00000006911	srl	97	73.291	Amphiprion_percula
ENSNBRG00000002422	SRL	77	76.122	ENSATEG00000009643	SRL	100	79.892	Anabas_testudineus
ENSNBRG00000002422	SRL	56	76.389	ENSATEG00000024315	srl	97	73.718	Anabas_testudineus
ENSNBRG00000002422	SRL	58	70.346	ENSACAG00000016380	SRL	83	70.940	Anolis_carolinensis
ENSNBRG00000002422	SRL	56	76.620	ENSACLG00000027685	srl	99	74.194	Astatotilapia_calliptera
ENSNBRG00000002422	SRL	100	97.270	ENSACLG00000024674	SRL	100	97.270	Astatotilapia_calliptera
ENSNBRG00000002422	SRL	56	76.102	ENSAMXG00000018789	srl	89	73.718	Astyanax_mexicanus
ENSNBRG00000002422	SRL	59	78.780	ENSAMXG00000038693	SRL	100	75.824	Astyanax_mexicanus
ENSNBRG00000002422	SRL	56	73.660	ENSBTAG00000001078	SRL	59	68.548	Bos_taurus
ENSNBRG00000002422	SRL	57	72.088	ENSCJAG00000019750	SRL	93	73.187	Callithrix_jacchus
ENSNBRG00000002422	SRL	63	68.172	ENSCAFG00000019233	SRL	85	70.551	Canis_familiaris
ENSNBRG00000002422	SRL	56	73.953	ENSCAFG00020025024	SRL	60	67.530	Canis_lupus_dingo
ENSNBRG00000002422	SRL	62	68.277	ENSCHIG00000017927	SRL	79	56.031	Capra_hircus
ENSNBRG00000002422	SRL	60	69.762	ENSTSYG00000007919	SRL	98	74.023	Carlito_syrichta
ENSNBRG00000002422	SRL	62	68.421	ENSCPOG00000012643	SRL	94	72.967	Cavia_porcellus
ENSNBRG00000002422	SRL	52	74.074	ENSCCAG00000032646	SRL	100	75.510	Cebus_capucinus
ENSNBRG00000002422	SRL	80	56.889	ENSCATG00000032227	-	93	72.747	Cercocebus_atys
ENSNBRG00000002422	SRL	62	68.421	ENSCLAG00000016242	SRL	94	72.967	Chinchilla_lanigera
ENSNBRG00000002422	SRL	62	69.038	ENSCSAG00000009635	-	52	66.538	Chlorocebus_sabaeus
ENSNBRG00000002422	SRL	52	76.633	ENSCHOG00000001618	SRL	52	76.633	Choloepus_hoffmanni
ENSNBRG00000002422	SRL	57	75.810	ENSCPBG00000026371	SRL	94	70.825	Chrysemys_picta_bellii
ENSNBRG00000002422	SRL	54	54.060	ENSCING00000005231	-	94	54.762	Ciona_intestinalis
ENSNBRG00000002422	SRL	60	69.330	ENSCANG00000035872	SRL	99	72.789	Colobus_angolensis_palliatus
ENSNBRG00000002422	SRL	70	63.904	ENSCGRG00001016630	Srl	94	72.747	Cricetulus_griseus_chok1gshd
ENSNBRG00000002422	SRL	70	63.904	ENSCGRG00000005458	Srl	94	72.747	Cricetulus_griseus_crigri
ENSNBRG00000002422	SRL	58	73.434	ENSCSEG00000016151	srl	96	73.434	Cynoglossus_semilaevis
ENSNBRG00000002422	SRL	57	82.198	ENSCSEG00000011866	SRL	89	83.077	Cynoglossus_semilaevis
ENSNBRG00000002422	SRL	58	74.298	ENSCVAG00000003513	srl	97	74.403	Cyprinodon_variegatus
ENSNBRG00000002422	SRL	96	64.168	ENSCVAG00000022465	SRL	100	64.540	Cyprinodon_variegatus
ENSNBRG00000002422	SRL	56	77.083	ENSDARG00000104587	srl	95	75.435	Danio_rerio
ENSNBRG00000002422	SRL	51	80.102	ENSDARG00000112959	CABZ01072309.1	100	78.880	Danio_rerio
ENSNBRG00000002422	SRL	57	72.747	ENSDNOG00000011643	SRL	56	68.800	Dasypus_novemcinctus
ENSNBRG00000002422	SRL	60	70.410	ENSDORG00000014807	Srl	94	72.747	Dipodomys_ordii
ENSNBRG00000002422	SRL	56	74.592	ENSEASG00005000942	SRL	71	58.654	Equus_asinus_asinus
ENSNBRG00000002422	SRL	56	74.592	ENSECAG00000024219	SRL	96	71.215	Equus_caballus
ENSNBRG00000002422	SRL	90	66.667	ENSELUG00000022266	SRL	94	54.994	Esox_lucius
ENSNBRG00000002422	SRL	56	76.852	ENSELUG00000015616	srl	94	73.077	Esox_lucius
ENSNBRG00000002422	SRL	56	73.953	ENSFCAG00000022075	SRL	97	70.851	Felis_catus
ENSNBRG00000002422	SRL	58	72.160	ENSFALG00000004328	SRL	83	58.824	Ficedula_albicollis
ENSNBRG00000002422	SRL	62	68.632	ENSFDAG00000006199	SRL	94	72.967	Fukomys_damarensis
ENSNBRG00000002422	SRL	99	66.422	ENSFHEG00000011854	SRL	100	84.848	Fundulus_heteroclitus
ENSNBRG00000002422	SRL	56	76.620	ENSFHEG00000011239	srl	96	75.219	Fundulus_heteroclitus
ENSNBRG00000002422	SRL	56	74.266	ENSGMOG00000014954	srl	100	73.019	Gadus_morhua
ENSNBRG00000002422	SRL	70	62.000	ENSGALG00000038884	SRL	93	73.068	Gallus_gallus
ENSNBRG00000002422	SRL	56	76.389	ENSGAFG00000000010	srl	99	73.561	Gambusia_affinis
ENSNBRG00000002422	SRL	96	65.752	ENSGAFG00000016984	SRL	99	85.065	Gambusia_affinis
ENSNBRG00000002422	SRL	56	74.266	ENSGACG00000011332	srl	99	73.019	Gasterosteus_aculeatus
ENSNBRG00000002422	SRL	80	58.730	ENSGGOG00000011312	-	93	72.747	Gorilla_gorilla
ENSNBRG00000002422	SRL	56	76.620	ENSHBUG00000007581	srl	99	74.194	Haplochromis_burtoni
ENSNBRG00000002422	SRL	100	97.767	ENSHBUG00000015710	SRL	100	97.767	Haplochromis_burtoni
ENSNBRG00000002422	SRL	62	68.421	ENSHGLG00000015271	SRL	94	72.747	Heterocephalus_glaber_female
ENSNBRG00000002422	SRL	62	68.421	ENSHGLG00100019378	SRL	94	72.747	Heterocephalus_glaber_male
ENSNBRG00000002422	SRL	99	59.804	ENSHCOG00000001012	SRL	95	79.626	Hippocampus_comes
ENSNBRG00000002422	SRL	56	75.926	ENSHCOG00000008687	srl	99	73.593	Hippocampus_comes
ENSNBRG00000002422	SRL	58	70.759	ENSIPUG00000011609	SRL	100	70.961	Ictalurus_punctatus
ENSNBRG00000002422	SRL	56	75.231	ENSIPUG00000012513	srl	98	72.766	Ictalurus_punctatus
ENSNBRG00000002422	SRL	62	69.023	ENSSTOG00000021151	-	94	72.967	Ictidomys_tridecemlineatus
ENSNBRG00000002422	SRL	62	69.474	ENSJJAG00000016400	Srl	94	72.747	Jaculus_jaculus
ENSNBRG00000002422	SRL	99	69.107	ENSKMAG00000019537	SRL	100	87.004	Kryptolebias_marmoratus
ENSNBRG00000002422	SRL	56	76.443	ENSKMAG00000014115	srl	97	74.229	Kryptolebias_marmoratus
ENSNBRG00000002422	SRL	56	75.926	ENSLBEG00000026643	srl	97	73.291	Labrus_bergylta
ENSNBRG00000002422	SRL	58	84.829	ENSLBEG00000013811	SRL	98	84.402	Labrus_bergylta
ENSNBRG00000002422	SRL	57	73.923	ENSLACG00000002825	SRL	98	73.187	Latimeria_chalumnae
ENSNBRG00000002422	SRL	61	71.218	ENSLOCG00000002644	srl	96	74.403	Lepisosteus_oculatus
ENSNBRG00000002422	SRL	89	55.102	ENSLAFG00000006329	SRL	58	66.795	Loxodonta_africana
ENSNBRG00000002422	SRL	57	71.655	ENSMFAG00000037383	SRL	99	72.789	Macaca_fascicularis
ENSNBRG00000002422	SRL	62	69.038	ENSMNEG00000019236	-	93	72.747	Macaca_nemestrina
ENSNBRG00000002422	SRL	52	71.960	ENSMLEG00000032156	SRL	88	73.201	Mandrillus_leucophaeus
ENSNBRG00000002422	SRL	56	76.157	ENSMAMG00000023322	srl	96	73.763	Mastacembelus_armatus
ENSNBRG00000002422	SRL	78	72.393	ENSMAMG00000013756	SRL	99	65.367	Mastacembelus_armatus
ENSNBRG00000002422	SRL	56	76.620	ENSMZEG00005004548	srl	99	74.194	Maylandia_zebra
ENSNBRG00000002422	SRL	99	97.616	ENSMZEG00005004010	SRL	100	97.616	Maylandia_zebra
ENSNBRG00000002422	SRL	56	74.478	ENSMGAG00000009342	SRL	92	79.726	Meleagris_gallopavo
ENSNBRG00000002422	SRL	62	68.889	ENSMICG00000032307	SRL	94	73.304	Microcebus_murinus
ENSNBRG00000002422	SRL	62	69.263	ENSMOCG00000008208	Srl	94	72.308	Microtus_ochrogaster
ENSNBRG00000002422	SRL	56	83.296	ENSMMOG00000021572	SRL	99	82.340	Mola_mola
ENSNBRG00000002422	SRL	56	75.926	ENSMMOG00000013970	srl	100	73.650	Mola_mola
ENSNBRG00000002422	SRL	88	56.831	ENSMODG00000016380	-	52	71.398	Monodelphis_domestica
ENSNBRG00000002422	SRL	56	75.694	ENSMALG00000005039	srl	99	73.276	Monopterus_albus
ENSNBRG00000002422	SRL	57	83.105	ENSMALG00000000670	SRL	99	83.105	Monopterus_albus
ENSNBRG00000002422	SRL	68	64.428	MGP_CAROLIEiJ_G0020400	Srl	94	72.747	Mus_caroli
ENSNBRG00000002422	SRL	65	66.667	ENSMUSG00000022519	Srl	94	72.747	Mus_musculus
ENSNBRG00000002422	SRL	56	74.419	MGP_PahariEiJ_G0016108	Srl	57	65.926	Mus_pahari
ENSNBRG00000002422	SRL	65	66.667	MGP_SPRETEiJ_G0021294	Srl	94	72.747	Mus_spretus
ENSNBRG00000002422	SRL	56	73.953	ENSMPUG00000015025	SRL	61	67.251	Mustela_putorius_furo
ENSNBRG00000002422	SRL	56	74.186	ENSMLUG00000030733	SRL	56	72.747	Myotis_lucifugus
ENSNBRG00000002422	SRL	60	70.513	ENSNGAG00000019741	Srl	94	72.967	Nannospalax_galili
ENSNBRG00000002422	SRL	52	73.449	ENSNLEG00000029051	SRL	88	74.690	Nomascus_leucogenys
ENSNBRG00000002422	SRL	52	75.439	ENSOPRG00000000477	-	52	68.571	Ochotona_princeps
ENSNBRG00000002422	SRL	61	69.231	ENSODEG00000013256	SRL	94	73.626	Octodon_degus
ENSNBRG00000002422	SRL	56	76.620	ENSONIG00000005192	srl	96	74.569	Oreochromis_niloticus
ENSNBRG00000002422	SRL	59	70.737	ENSOCUG00000025140	SRL	64	58.401	Oryctolagus_cuniculus
ENSNBRG00000002422	SRL	57	75.455	ENSORLG00000008291	srl	93	76.658	Oryzias_latipes
ENSNBRG00000002422	SRL	100	64.861	ENSORLG00000015064	SRL	98	82.900	Oryzias_latipes
ENSNBRG00000002422	SRL	57	75.682	ENSORLG00020019784	srl	81	76.904	Oryzias_latipes_hni
ENSNBRG00000002422	SRL	61	81.663	ENSORLG00020018173	SRL	98	83.117	Oryzias_latipes_hni
ENSNBRG00000002422	SRL	57	75.455	ENSORLG00015009342	srl	93	73.932	Oryzias_latipes_hsok
ENSNBRG00000002422	SRL	61	81.876	ENSORLG00015019063	SRL	98	83.333	Oryzias_latipes_hsok
ENSNBRG00000002422	SRL	57	75.455	ENSOMEG00000010006	srl	97	75.610	Oryzias_melastigma
ENSNBRG00000002422	SRL	82	79.732	ENSOMEG00000005682	SRL	100	59.909	Oryzias_melastigma
ENSNBRG00000002422	SRL	63	68.041	ENSOGAG00000029266	SRL	68	59.802	Otolemur_garnettii
ENSNBRG00000002422	SRL	56	73.660	ENSOARG00000003074	SRL	55	72.467	Ovis_aries
ENSNBRG00000002422	SRL	67	65.655	ENSPPAG00000024919	-	99	72.789	Pan_paniscus
ENSNBRG00000002422	SRL	56	72.622	ENSPPRG00000010274	SRL	98	73.333	Panthera_pardus
ENSNBRG00000002422	SRL	56	72.622	ENSPTIG00000015162	SRL	98	73.333	Panthera_tigris_altaica
ENSNBRG00000002422	SRL	67	65.655	ENSPTRG00000007712	SRL	99	72.789	Pan_troglodytes
ENSNBRG00000002422	SRL	61	68.856	ENSPANG00000013804	SRL	98	69.915	Papio_anubis
ENSNBRG00000002422	SRL	99	56.533	ENSPKIG00000024974	SRL	90	72.138	Paramormyrops_kingsleyae
ENSNBRG00000002422	SRL	58	75.333	ENSPKIG00000006405	srl	95	76.139	Paramormyrops_kingsleyae
ENSNBRG00000002422	SRL	85	57.315	ENSPSIG00000008586	SRL	66	58.862	Pelodiscus_sinensis
ENSNBRG00000002422	SRL	56	83.102	ENSPMGG00000023505	-	99	81.538	Periophthalmus_magnuspinnatus
ENSNBRG00000002422	SRL	58	74.353	ENSPMGG00000021081	srl	97	74.353	Periophthalmus_magnuspinnatus
ENSNBRG00000002422	SRL	62	69.474	ENSPEMG00000015842	Srl	94	72.527	Peromyscus_maniculatus_bairdii
ENSNBRG00000002422	SRL	56	64.626	ENSPMAG00000004786	srl	99	63.946	Petromyzon_marinus
ENSNBRG00000002422	SRL	60	70.753	ENSPCIG00000012128	SRL	98	73.002	Phascolarctos_cinereus
ENSNBRG00000002422	SRL	58	72.860	ENSPFOG00000011408	srl	96	72.860	Poecilia_formosa
ENSNBRG00000002422	SRL	56	76.620	ENSPLAG00000008017	srl	99	73.774	Poecilia_latipinna
ENSNBRG00000002422	SRL	99	64.828	ENSPLAG00000002932	SRL	99	84.382	Poecilia_latipinna
ENSNBRG00000002422	SRL	56	76.620	ENSPMEG00000006745	srl	99	73.774	Poecilia_mexicana
ENSNBRG00000002422	SRL	99	65.556	ENSPMEG00000005890	SRL	99	65.590	Poecilia_mexicana
ENSNBRG00000002422	SRL	56	76.389	ENSPREG00000007751	srl	99	74.298	Poecilia_reticulata
ENSNBRG00000002422	SRL	72	76.978	ENSPREG00000000315	SRL	99	84.816	Poecilia_reticulata
ENSNBRG00000002422	SRL	56	72.454	ENSPPYG00000007053	SRL	100	72.172	Pongo_abelii
ENSNBRG00000002422	SRL	63	66.994	ENSPCAG00000003378	-	56	66.994	Procavia_capensis
ENSNBRG00000002422	SRL	56	73.380	ENSPCOG00000023135	SRL	98	74.253	Propithecus_coquereli
ENSNBRG00000002422	SRL	56	74.419	ENSPVAG00000006586	SRL	54	72.967	Pteropus_vampyrus
ENSNBRG00000002422	SRL	100	97.891	ENSPNYG00000003423	SRL	100	97.891	Pundamilia_nyererei
ENSNBRG00000002422	SRL	56	76.620	ENSPNYG00000001200	srl	99	74.194	Pundamilia_nyererei
ENSNBRG00000002422	SRL	57	77.727	ENSPNAG00000007361	-	91	78.194	Pygocentrus_nattereri
ENSNBRG00000002422	SRL	61	70.672	ENSPNAG00000023106	srl	99	70.672	Pygocentrus_nattereri
ENSNBRG00000002422	SRL	56	74.419	ENSRNOG00000005269	Srl	56	65.962	Rattus_norvegicus
ENSNBRG00000002422	SRL	65	67.063	ENSRBIG00000042358	SRL	72	57.380	Rhinopithecus_bieti
ENSNBRG00000002422	SRL	56	74.306	ENSSBOG00000029273	SRL	93	73.187	Saimiri_boliviensis_boliviensis
ENSNBRG00000002422	SRL	64	68.269	ENSSHAG00000011715	-	57	67.173	Sarcophilus_harrisii
ENSNBRG00000002422	SRL	57	75.824	ENSSFOG00015009773	srl	94	75.604	Scleropages_formosus
ENSNBRG00000002422	SRL	75	74.478	ENSSFOG00015021327	SRL	54	66.934	Scleropages_formosus
ENSNBRG00000002422	SRL	56	75.463	ENSSMAG00000016274	srl	98	73.753	Scophthalmus_maximus
ENSNBRG00000002422	SRL	82	73.404	ENSSMAG00000002232	SRL	100	61.311	Scophthalmus_maximus
ENSNBRG00000002422	SRL	56	76.389	ENSSDUG00000010808	srl	98	74.781	Seriola_dumerili
ENSNBRG00000002422	SRL	57	83.117	ENSSDUG00000009161	SRL	98	83.117	Seriola_dumerili
ENSNBRG00000002422	SRL	57	88.571	ENSSLDG00000014601	SRL	99	88.571	Seriola_lalandi_dorsalis
ENSNBRG00000002422	SRL	56	76.389	ENSSLDG00000022024	srl	97	74.187	Seriola_lalandi_dorsalis
ENSNBRG00000002422	SRL	57	72.149	ENSSPUG00000016859	SRL	98	71.930	Sphenodon_punctatus
ENSNBRG00000002422	SRL	56	76.157	ENSSPAG00000019105	srl	95	74.082	Stegastes_partitus
ENSNBRG00000002422	SRL	57	85.000	ENSSPAG00000014254	SRL	98	85.463	Stegastes_partitus
ENSNBRG00000002422	SRL	62	68.333	ENSSSCG00000007949	SRL	98	73.348	Sus_scrofa
ENSNBRG00000002422	SRL	58	72.160	ENSTGUG00000003951	-	97	72.627	Taeniopygia_guttata
ENSNBRG00000002422	SRL	65	85.383	ENSTRUG00000013310	SRL	97	60.435	Takifugu_rubripes
ENSNBRG00000002422	SRL	56	75.926	ENSTRUG00000006005	srl	96	73.763	Takifugu_rubripes
ENSNBRG00000002422	SRL	56	75.926	ENSTNIG00000009739	srl	96	73.548	Tetraodon_nigroviridis
ENSNBRG00000002422	SRL	62	67.589	ENSUAMG00000005701	SRL	59	67.683	Ursus_americanus
ENSNBRG00000002422	SRL	62	67.589	ENSUMAG00000002574	SRL	59	67.683	Ursus_maritimus
ENSNBRG00000002422	SRL	56	73.953	ENSVVUG00000016331	-	51	70.464	Vulpes_vulpes
ENSNBRG00000002422	SRL	60	70.450	ENSXETG00000017313	srl	98	73.085	Xenopus_tropicalis
ENSNBRG00000002422	SRL	56	75.917	ENSXCOG00000010424	srl	99	75.336	Xiphophorus_couchianus
ENSNBRG00000002422	SRL	58	85.097	ENSXCOG00000014584	SRL	99	84.698	Xiphophorus_couchianus
ENSNBRG00000002422	SRL	96	65.732	ENSXMAG00000027598	SRL	100	66.364	Xiphophorus_maculatus
ENSNBRG00000002422	SRL	56	76.389	ENSXMAG00000004625	srl	92	73.978	Xiphophorus_maculatus