EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002434 (Gene tree)
Gene ID: 102798486
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 2337 bases
Position: chrJH422276.1:16165838-16168174
Accession: 102798486
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003052	FDF	PF09532.10	1.7e-10	1	1
ENSNBRP00000003052	LSM14	PF12701.7	5.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003161	-	1437	XM_006782627	ENSNBRP00000003052	478 (aa)	XP_006782690	UPI0003EBD1D1

Gene Model

Click here to download ENSNBRG00000002434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002434's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002434	edc3	99	65.560	ENSNBRG00000007881	EDC3	100	65.424

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002434	edc3	100	67.976	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSNBRG00000002434	edc3	100	92.259	ENSAPOG00000010791	edc3	100	92.259	Acanthochromis_polyacanthus
ENSNBRG00000002434	edc3	100	58.907	ENSAPOG00000008655	EDC3	100	58.907	Acanthochromis_polyacanthus
ENSNBRG00000002434	edc3	100	67.583	ENSAMEG00000008963	EDC3	100	67.583	Ailuropoda_melanoleuca
ENSNBRG00000002434	edc3	100	96.653	ENSACIG00000017751	edc3	100	96.653	Amphilophus_citrinellus
ENSNBRG00000002434	edc3	99	64.257	ENSACIG00000005330	EDC3	99	64.257	Amphilophus_citrinellus
ENSNBRG00000002434	edc3	100	92.469	ENSAOCG00000005431	edc3	100	92.469	Amphiprion_ocellaris
ENSNBRG00000002434	edc3	100	63.561	ENSAOCG00000009103	-	100	63.561	Amphiprion_ocellaris
ENSNBRG00000002434	edc3	100	63.768	ENSAPEG00000007841	EDC3	100	63.768	Amphiprion_percula
ENSNBRG00000002434	edc3	100	92.469	ENSAPEG00000000968	edc3	100	92.469	Amphiprion_percula
ENSNBRG00000002434	edc3	100	66.116	ENSATEG00000004205	-	100	66.116	Anabas_testudineus
ENSNBRG00000002434	edc3	100	93.305	ENSATEG00000015505	edc3	100	93.305	Anabas_testudineus
ENSNBRG00000002434	edc3	83	73.367	ENSAPLG00000008957	EDC3	88	73.367	Anas_platyrhynchos
ENSNBRG00000002434	edc3	77	65.909	ENSACAG00000000460	-	100	65.909	Anolis_carolinensis
ENSNBRG00000002434	edc3	100	68.173	ENSANAG00000024078	EDC3	100	68.173	Aotus_nancymaae
ENSNBRG00000002434	edc3	100	65.145	ENSACLG00000018776	-	100	65.145	Astatotilapia_calliptera
ENSNBRG00000002434	edc3	100	99.163	ENSACLG00000007232	edc3	100	99.163	Astatotilapia_calliptera
ENSNBRG00000002434	edc3	100	79.365	ENSAMXG00000001589	edc3	100	79.365	Astyanax_mexicanus
ENSNBRG00000002434	edc3	100	67.780	ENSBTAG00000007308	EDC3	100	67.780	Bos_taurus
ENSNBRG00000002434	edc3	100	68.369	ENSCJAG00000017681	EDC3	100	68.369	Callithrix_jacchus
ENSNBRG00000002434	edc3	100	67.583	ENSCAFG00000017935	EDC3	100	67.583	Canis_familiaris
ENSNBRG00000002434	edc3	100	67.583	ENSCAFG00020003909	EDC3	100	67.583	Canis_lupus_dingo
ENSNBRG00000002434	edc3	100	67.780	ENSCHIG00000023658	EDC3	100	67.780	Capra_hircus
ENSNBRG00000002434	edc3	100	68.369	ENSTSYG00000004822	EDC3	100	68.369	Carlito_syrichta
ENSNBRG00000002434	edc3	100	68.369	ENSCPOG00000015595	EDC3	100	68.369	Cavia_porcellus
ENSNBRG00000002434	edc3	100	68.173	ENSCCAG00000021663	EDC3	100	68.173	Cebus_capucinus
ENSNBRG00000002434	edc3	100	68.173	ENSCATG00000037511	EDC3	100	68.173	Cercocebus_atys
ENSNBRG00000002434	edc3	100	68.173	ENSCLAG00000005700	EDC3	100	68.173	Chinchilla_lanigera
ENSNBRG00000002434	edc3	100	68.173	ENSCSAG00000014239	EDC3	100	68.173	Chlorocebus_sabaeus
ENSNBRG00000002434	edc3	100	68.762	ENSCPBG00000024239	EDC3	100	68.762	Chrysemys_picta_bellii
ENSNBRG00000002434	edc3	100	38.780	ENSCING00000022142	-	99	38.780	Ciona_intestinalis
ENSNBRG00000002434	edc3	100	68.173	ENSCANG00000028699	EDC3	100	68.173	Colobus_angolensis_palliatus
ENSNBRG00000002434	edc3	100	67.583	ENSCGRG00001013874	Edc3	100	67.583	Cricetulus_griseus_chok1gshd
ENSNBRG00000002434	edc3	100	67.583	ENSCGRG00000011885	Edc3	100	67.583	Cricetulus_griseus_crigri
ENSNBRG00000002434	edc3	99	91.405	ENSCSEG00000012996	edc3	99	91.405	Cynoglossus_semilaevis
ENSNBRG00000002434	edc3	100	88.703	ENSCVAG00000008023	edc3	100	88.703	Cyprinodon_variegatus
ENSNBRG00000002434	edc3	99	76.832	ENSDARG00000051931	edc3	99	76.832	Danio_rerio
ENSNBRG00000002434	edc3	100	59.302	ENSDNOG00000030661	EDC3	100	59.302	Dasypus_novemcinctus
ENSNBRG00000002434	edc3	68	81.481	ENSETEG00000002398	-	64	81.481	Echinops_telfairi
ENSNBRG00000002434	edc3	100	67.780	ENSEASG00005005071	EDC3	100	67.780	Equus_asinus_asinus
ENSNBRG00000002434	edc3	100	67.780	ENSECAG00000017994	EDC3	100	67.780	Equus_caballus
ENSNBRG00000002434	edc3	100	71.042	ENSELUG00000007607	EDC3	100	71.042	Esox_lucius
ENSNBRG00000002434	edc3	100	80.785	ENSELUG00000005794	edc3	100	80.785	Esox_lucius
ENSNBRG00000002434	edc3	100	67.780	ENSFCAG00000002014	EDC3	100	67.780	Felis_catus
ENSNBRG00000002434	edc3	98	67.269	ENSFALG00000004543	EDC3	96	67.269	Ficedula_albicollis
ENSNBRG00000002434	edc3	100	68.173	ENSFDAG00000012582	EDC3	100	68.173	Fukomys_damarensis
ENSNBRG00000002434	edc3	100	89.540	ENSFHEG00000009375	edc3	100	89.540	Fundulus_heteroclitus
ENSNBRG00000002434	edc3	100	84.615	ENSGMOG00000002715	edc3	100	84.615	Gadus_morhua
ENSNBRG00000002434	edc3	100	68.245	ENSGALG00000040181	EDC3	100	68.245	Gallus_gallus
ENSNBRG00000002434	edc3	100	89.121	ENSGAFG00000014433	edc3	100	89.121	Gambusia_affinis
ENSNBRG00000002434	edc3	100	89.958	ENSGACG00000009783	edc3	100	89.958	Gasterosteus_aculeatus
ENSNBRG00000002434	edc3	99	61.448	ENSGACG00000014671	EDC3	99	61.448	Gasterosteus_aculeatus
ENSNBRG00000002434	edc3	100	69.034	ENSGAGG00000023477	EDC3	100	69.034	Gopherus_agassizii
ENSNBRG00000002434	edc3	100	67.976	ENSGGOG00000003552	EDC3	100	67.976	Gorilla_gorilla
ENSNBRG00000002434	edc3	99	65.489	ENSHBUG00000020817	EDC3	100	65.353	Haplochromis_burtoni
ENSNBRG00000002434	edc3	100	99.163	ENSHBUG00000003635	edc3	100	99.163	Haplochromis_burtoni
ENSNBRG00000002434	edc3	100	86.042	ENSHCOG00000016834	edc3	100	86.042	Hippocampus_comes
ENSNBRG00000002434	edc3	99	78.715	ENSIPUG00000005695	edc3	100	78.715	Ictalurus_punctatus
ENSNBRG00000002434	edc3	100	68.369	ENSSTOG00000013936	EDC3	100	68.369	Ictidomys_tridecemlineatus
ENSNBRG00000002434	edc3	100	67.780	ENSJJAG00000008074	Edc3	100	67.780	Jaculus_jaculus
ENSNBRG00000002434	edc3	100	90.188	ENSKMAG00000001243	edc3	100	90.188	Kryptolebias_marmoratus
ENSNBRG00000002434	edc3	100	63.693	ENSKMAG00000001987	EDC3	100	63.693	Kryptolebias_marmoratus
ENSNBRG00000002434	edc3	100	64.271	ENSLBEG00000017984	EDC3	100	64.271	Labrus_bergylta
ENSNBRG00000002434	edc3	100	90.795	ENSLBEG00000013435	edc3	99	90.795	Labrus_bergylta
ENSNBRG00000002434	edc3	100	69.650	ENSLACG00000014149	EDC3	100	69.650	Latimeria_chalumnae
ENSNBRG00000002434	edc3	99	73.077	ENSLOCG00000014625	edc3	99	73.279	Lepisosteus_oculatus
ENSNBRG00000002434	edc3	100	68.110	ENSLAFG00000002992	EDC3	100	68.110	Loxodonta_africana
ENSNBRG00000002434	edc3	100	68.369	ENSMFAG00000043074	EDC3	100	68.369	Macaca_fascicularis
ENSNBRG00000002434	edc3	100	68.369	ENSMMUG00000011071	EDC3	100	68.369	Macaca_mulatta
ENSNBRG00000002434	edc3	100	68.369	ENSMNEG00000035316	EDC3	100	68.369	Macaca_nemestrina
ENSNBRG00000002434	edc3	100	68.173	ENSMLEG00000030372	EDC3	100	68.173	Mandrillus_leucophaeus
ENSNBRG00000002434	edc3	100	91.841	ENSMAMG00000000505	edc3	100	91.841	Mastacembelus_armatus
ENSNBRG00000002434	edc3	99	64.151	ENSMAMG00000005423	-	99	64.151	Mastacembelus_armatus
ENSNBRG00000002434	edc3	100	98.954	ENSMZEG00005004892	edc3	100	98.954	Maylandia_zebra
ENSNBRG00000002434	edc3	100	64.694	ENSMZEG00005005654	EDC3	100	64.694	Maylandia_zebra
ENSNBRG00000002434	edc3	100	67.653	ENSMGAG00000002617	EDC3	100	67.653	Meleagris_gallopavo
ENSNBRG00000002434	edc3	100	68.369	ENSMICG00000043190	EDC3	100	68.369	Microcebus_murinus
ENSNBRG00000002434	edc3	100	67.583	ENSMOCG00000016205	Edc3	100	67.583	Microtus_ochrogaster
ENSNBRG00000002434	edc3	99	91.824	ENSMMOG00000012278	edc3	99	91.824	Mola_mola
ENSNBRG00000002434	edc3	100	68.173	ENSMODG00000009442	EDC3	100	68.173	Monodelphis_domestica
ENSNBRG00000002434	edc3	100	93.096	ENSMALG00000008658	edc3	100	93.096	Monopterus_albus
ENSNBRG00000002434	edc3	100	67.976	MGP_CAROLIEiJ_G0032280	Edc3	100	78.947	Mus_caroli
ENSNBRG00000002434	edc3	100	67.976	ENSMUSG00000038957	Edc3	100	78.947	Mus_musculus
ENSNBRG00000002434	edc3	100	67.976	MGP_PahariEiJ_G0015146	Edc3	100	78.947	Mus_pahari
ENSNBRG00000002434	edc3	100	67.976	MGP_SPRETEiJ_G0033420	Edc3	100	78.947	Mus_spretus
ENSNBRG00000002434	edc3	100	67.387	ENSMPUG00000017293	EDC3	100	67.387	Mustela_putorius_furo
ENSNBRG00000002434	edc3	100	68.102	ENSMLUG00000016382	EDC3	100	68.102	Myotis_lucifugus
ENSNBRG00000002434	edc3	100	67.976	ENSNGAG00000010923	Edc3	100	67.976	Nannospalax_galili
ENSNBRG00000002434	edc3	100	58.939	ENSNLEG00000014577	EDC3	100	58.939	Nomascus_leucogenys
ENSNBRG00000002434	edc3	100	67.653	ENSMEUG00000009077	EDC3	100	67.653	Notamacropus_eugenii
ENSNBRG00000002434	edc3	84	81.481	ENSOPRG00000009540	-	79	81.481	Ochotona_princeps
ENSNBRG00000002434	edc3	100	98.954	ENSONIG00000008434	edc3	100	98.954	Oreochromis_niloticus
ENSNBRG00000002434	edc3	100	61.315	ENSONIG00000002932	-	100	61.315	Oreochromis_niloticus
ENSNBRG00000002434	edc3	77	64.232	ENSOCUG00000017740	EDC3	86	64.232	Oryctolagus_cuniculus
ENSNBRG00000002434	edc3	100	86.848	ENSORLG00000004883	edc3	100	86.848	Oryzias_latipes
ENSNBRG00000002434	edc3	100	63.071	ENSORLG00000014399	-	98	63.071	Oryzias_latipes
ENSNBRG00000002434	edc3	100	87.265	ENSORLG00020012262	edc3	100	87.265	Oryzias_latipes_hni
ENSNBRG00000002434	edc3	100	63.071	ENSORLG00020019446	-	100	63.071	Oryzias_latipes_hni
ENSNBRG00000002434	edc3	100	63.071	ENSORLG00015017635	-	96	63.071	Oryzias_latipes_hsok
ENSNBRG00000002434	edc3	100	87.474	ENSORLG00015005634	edc3	100	87.474	Oryzias_latipes_hsok
ENSNBRG00000002434	edc3	100	87.029	ENSOMEG00000014026	edc3	100	87.029	Oryzias_melastigma
ENSNBRG00000002434	edc3	100	64.389	ENSOMEG00000017354	EDC3	100	64.389	Oryzias_melastigma
ENSNBRG00000002434	edc3	100	67.976	ENSOGAG00000014441	EDC3	100	67.976	Otolemur_garnettii
ENSNBRG00000002434	edc3	100	67.059	ENSOARG00000003476	EDC3	100	67.451	Ovis_aries
ENSNBRG00000002434	edc3	100	67.976	ENSPPAG00000040143	EDC3	100	67.976	Pan_paniscus
ENSNBRG00000002434	edc3	100	67.780	ENSPPRG00000006257	EDC3	100	67.780	Panthera_pardus
ENSNBRG00000002434	edc3	100	67.780	ENSPTIG00000017424	EDC3	100	67.780	Panthera_tigris_altaica
ENSNBRG00000002434	edc3	100	67.976	ENSPTRG00000007279	EDC3	100	67.976	Pan_troglodytes
ENSNBRG00000002434	edc3	100	68.173	ENSPANG00000015997	EDC3	100	68.173	Papio_anubis
ENSNBRG00000002434	edc3	100	74.949	ENSPKIG00000019810	EDC3	100	74.949	Paramormyrops_kingsleyae
ENSNBRG00000002434	edc3	100	74.213	ENSPKIG00000004416	edc3	100	74.213	Paramormyrops_kingsleyae
ENSNBRG00000002434	edc3	100	64.244	ENSPSIG00000008474	EDC3	100	64.440	Pelodiscus_sinensis
ENSNBRG00000002434	edc3	100	88.125	ENSPMGG00000007223	edc3	100	88.125	Periophthalmus_magnuspinnatus
ENSNBRG00000002434	edc3	100	67.976	ENSPEMG00000015260	Edc3	100	67.976	Peromyscus_maniculatus_bairdii
ENSNBRG00000002434	edc3	100	67.456	ENSPCIG00000006276	EDC3	70	67.589	Phascolarctos_cinereus
ENSNBRG00000002434	edc3	100	89.749	ENSPFOG00000012204	edc3	100	89.749	Poecilia_formosa
ENSNBRG00000002434	edc3	100	89.749	ENSPLAG00000014420	edc3	100	89.749	Poecilia_latipinna
ENSNBRG00000002434	edc3	100	89.749	ENSPMEG00000023289	edc3	100	89.749	Poecilia_mexicana
ENSNBRG00000002434	edc3	100	89.331	ENSPREG00000016022	edc3	100	89.331	Poecilia_reticulata
ENSNBRG00000002434	edc3	100	67.583	ENSPPYG00000006642	EDC3	100	67.583	Pongo_abelii
ENSNBRG00000002434	edc3	93	81.481	ENSPCAG00000002802	EDC3	88	81.481	Procavia_capensis
ENSNBRG00000002434	edc3	100	67.976	ENSPCOG00000013364	EDC3	100	67.976	Propithecus_coquereli
ENSNBRG00000002434	edc3	100	67.780	ENSPVAG00000014733	EDC3	100	67.780	Pteropus_vampyrus
ENSNBRG00000002434	edc3	100	98.954	ENSPNYG00000021797	edc3	100	98.954	Pundamilia_nyererei
ENSNBRG00000002434	edc3	99	65.489	ENSPNYG00000009669	EDC3	100	65.353	Pundamilia_nyererei
ENSNBRG00000002434	edc3	100	79.762	ENSPNAG00000019657	edc3	100	79.762	Pygocentrus_nattereri
ENSNBRG00000002434	edc3	99	67.984	ENSRNOG00000019579	Edc3	99	67.984	Rattus_norvegicus
ENSNBRG00000002434	edc3	100	68.173	ENSRBIG00000019488	EDC3	100	68.173	Rhinopithecus_bieti
ENSNBRG00000002434	edc3	100	68.173	ENSRROG00000034959	EDC3	100	68.173	Rhinopithecus_roxellana
ENSNBRG00000002434	edc3	100	68.173	ENSSBOG00000004896	EDC3	100	68.173	Saimiri_boliviensis_boliviensis
ENSNBRG00000002434	edc3	96	67.418	ENSSHAG00000015075	EDC3	95	67.418	Sarcophilus_harrisii
ENSNBRG00000002434	edc3	100	78.131	ENSSFOG00015016939	edc3	100	78.131	Scleropages_formosus
ENSNBRG00000002434	edc3	100	72.464	ENSSFOG00015002439	edc3	100	72.878	Scleropages_formosus
ENSNBRG00000002434	edc3	100	91.841	ENSSMAG00000010695	edc3	100	91.841	Scophthalmus_maximus
ENSNBRG00000002434	edc3	99	64.938	ENSSMAG00000010176	-	99	64.938	Scophthalmus_maximus
ENSNBRG00000002434	edc3	100	92.469	ENSSDUG00000021844	edc3	100	92.469	Seriola_dumerili
ENSNBRG00000002434	edc3	100	67.702	ENSSDUG00000007671	EDC3	100	67.702	Seriola_dumerili
ENSNBRG00000002434	edc3	100	92.259	ENSSLDG00000022046	edc3	100	92.259	Seriola_lalandi_dorsalis
ENSNBRG00000002434	edc3	79	77.823	ENSSARG00000003907	EDC3	80	77.823	Sorex_araneus
ENSNBRG00000002434	edc3	100	67.191	ENSSPUG00000008232	EDC3	100	67.191	Sphenodon_punctatus
ENSNBRG00000002434	edc3	100	65.010	ENSSPAG00000020327	EDC3	100	65.424	Stegastes_partitus
ENSNBRG00000002434	edc3	100	93.305	ENSSPAG00000010009	edc3	100	93.305	Stegastes_partitus
ENSNBRG00000002434	edc3	100	70.417	ENSSSCG00000001903	EDC3	100	70.417	Sus_scrofa
ENSNBRG00000002434	edc3	100	68.639	ENSTGUG00000004007	EDC3	100	68.639	Taeniopygia_guttata
ENSNBRG00000002434	edc3	100	89.121	ENSTRUG00000017078	edc3	100	89.121	Takifugu_rubripes
ENSNBRG00000002434	edc3	100	88.125	ENSTNIG00000016047	edc3	100	88.125	Tetraodon_nigroviridis
ENSNBRG00000002434	edc3	100	68.701	ENSTTRG00000007990	EDC3	100	68.701	Tursiops_truncatus
ENSNBRG00000002434	edc3	100	67.583	ENSUAMG00000026710	-	100	67.583	Ursus_americanus
ENSNBRG00000002434	edc3	100	67.583	ENSUMAG00000005006	EDC3	96	67.583	Ursus_maritimus
ENSNBRG00000002434	edc3	84	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSNBRG00000002434	edc3	100	67.583	ENSVVUG00000018601	EDC3	100	67.583	Vulpes_vulpes
ENSNBRG00000002434	edc3	72	74.212	ENSXETG00000010622	edc3	99	75.645	Xenopus_tropicalis
ENSNBRG00000002434	edc3	100	89.121	ENSXMAG00000007377	edc3	100	89.121	Xiphophorus_maculatus