EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002542 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 879 bases
Position: chrAFNY01116808.1:283-1161
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	1	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	2	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	3	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	4	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	5	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	6	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	7	8
ENSNBRP00000003145	zf-C2H2	PF00096.26	2.6e-52	8	8
ENSNBRP00000003145	zf-met	PF12874.7	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003256	-	879	-	ENSNBRP00000003145	293 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000002542's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002542	-	91	45.985	ENSNBRG00000024179	-	61	45.136
ENSNBRG00000002542	-	85	50.207	ENSNBRG00000016603	-	87	51.230
ENSNBRG00000002542	-	82	52.113	ENSNBRG00000019770	-	86	52.113
ENSNBRG00000002542	-	87	51.333	ENSNBRG00000015873	-	94	48.925
ENSNBRG00000002542	-	89	61.538	ENSNBRG00000005796	-	98	61.538
ENSNBRG00000002542	-	91	31.884	ENSNBRG00000014403	-	55	31.884
ENSNBRG00000002542	-	83	50.943	ENSNBRG00000016666	-	99	46.988
ENSNBRG00000002542	-	91	62.718	ENSNBRG00000008123	-	83	63.670
ENSNBRG00000002542	-	82	41.935	ENSNBRG00000012376	-	99	41.935
ENSNBRG00000002542	-	87	47.280	ENSNBRG00000024048	-	86	47.280
ENSNBRG00000002542	-	82	48.661	ENSNBRG00000024046	-	56	48.661
ENSNBRG00000002542	-	82	48.864	ENSNBRG00000010194	-	65	48.333
ENSNBRG00000002542	-	85	51.681	ENSNBRG00000006125	-	91	51.681
ENSNBRG00000002542	-	87	46.371	ENSNBRG00000016577	si:dkey-182i3.9	94	46.371
ENSNBRG00000002542	-	82	46.309	ENSNBRG00000001761	-	64	46.309
ENSNBRG00000002542	-	85	51.786	ENSNBRG00000001163	-	96	51.240
ENSNBRG00000002542	-	82	45.536	ENSNBRG00000024014	-	69	45.536
ENSNBRG00000002542	-	87	48.583	ENSNBRG00000024019	-	84	48.583
ENSNBRG00000002542	-	91	50.628	ENSNBRG00000016282	-	97	50.628
ENSNBRG00000002542	-	82	43.119	ENSNBRG00000010351	-	88	43.119
ENSNBRG00000002542	-	85	46.927	ENSNBRG00000001641	-	73	46.927
ENSNBRG00000002542	-	82	46.193	ENSNBRG00000021375	-	51	46.193
ENSNBRG00000002542	-	82	47.283	ENSNBRG00000013501	-	78	47.283
ENSNBRG00000002542	-	82	35.714	ENSNBRG00000007221	scrt2	50	35.714
ENSNBRG00000002542	-	82	47.368	ENSNBRG00000016234	-	64	47.368
ENSNBRG00000002542	-	85	42.672	ENSNBRG00000009128	-	54	42.672
ENSNBRG00000002542	-	86	50.282	ENSNBRG00000000492	-	70	50.282
ENSNBRG00000002542	-	83	52.564	ENSNBRG00000013583	-	88	52.564
ENSNBRG00000002542	-	88	63.291	ENSNBRG00000005805	-	93	63.291
ENSNBRG00000002542	-	83	43.939	ENSNBRG00000021237	-	90	43.939
ENSNBRG00000002542	-	86	43.046	ENSNBRG00000012391	gfi1b	58	43.046
ENSNBRG00000002542	-	94	38.172	ENSNBRG00000010987	-	81	45.536
ENSNBRG00000002542	-	82	49.123	ENSNBRG00000007311	-	79	49.123
ENSNBRG00000002542	-	89	47.458	ENSNBRG00000000321	-	99	47.826
ENSNBRG00000002542	-	82	50.641	ENSNBRG00000013604	-	72	50.641
ENSNBRG00000002542	-	83	45.685	ENSNBRG00000024020	-	54	45.685
ENSNBRG00000002542	-	98	47.475	ENSNBRG00000001813	-	58	47.475
ENSNBRG00000002542	-	82	45.771	ENSNBRG00000024086	-	56	45.771
ENSNBRG00000002542	-	87	71.795	ENSNBRG00000008106	-	94	71.795
ENSNBRG00000002542	-	83	48.649	ENSNBRG00000006757	-	71	48.649
ENSNBRG00000002542	-	99	49.187	ENSNBRG00000016582	-	93	50.413
ENSNBRG00000002542	-	95	59.140	ENSNBRG00000009815	-	91	59.140
ENSNBRG00000002542	-	87	42.105	ENSNBRG00000009811	-	85	42.105
ENSNBRG00000002542	-	97	75.177	ENSNBRG00000004557	-	92	75.177
ENSNBRG00000002542	-	82	37.453	ENSNBRG00000002946	-	50	37.500
ENSNBRG00000002542	-	86	42.742	ENSNBRG00000008223	-	91	42.963
ENSNBRG00000002542	-	86	45.181	ENSNBRG00000022241	-	86	45.181
ENSNBRG00000002542	-	86	47.521	ENSNBRG00000016550	-	90	47.521
ENSNBRG00000002542	-	83	38.819	ENSNBRG00000006411	-	87	38.819
ENSNBRG00000002542	-	81	43.750	ENSNBRG00000023960	-	63	43.750
ENSNBRG00000002542	-	87	34.597	ENSNBRG00000020159	znf526	86	34.568
ENSNBRG00000002542	-	82	37.555	ENSNBRG00000004976	prdm5	67	37.555
ENSNBRG00000002542	-	85	38.532	ENSNBRG00000020314	si:dkey-89b17.4	70	38.532
ENSNBRG00000002542	-	92	59.193	ENSNBRG00000003250	-	90	59.193
ENSNBRG00000002542	-	87	49.791	ENSNBRG00000000577	-	76	49.791
ENSNBRG00000002542	-	87	45.299	ENSNBRG00000021355	-	84	45.299
ENSNBRG00000002542	-	85	69.874	ENSNBRG00000004523	-	92	69.874
ENSNBRG00000002542	-	87	41.053	ENSNBRG00000000708	-	92	41.053
ENSNBRG00000002542	-	96	72.401	ENSNBRG00000005823	-	83	72.662
ENSNBRG00000002542	-	82	60.294	ENSNBRG00000010405	-	77	60.294
ENSNBRG00000002542	-	92	53.177	ENSNBRG00000016564	-	87	56.727
ENSNBRG00000002542	-	82	45.745	ENSNBRG00000004381	-	87	41.711
ENSNBRG00000002542	-	82	40.800	ENSNBRG00000021998	-	54	40.800
ENSNBRG00000002542	-	82	43.836	ENSNBRG00000001834	-	99	43.836
ENSNBRG00000002542	-	94	35.714	ENSNBRG00000018718	zbtb47b	67	40.278
ENSNBRG00000002542	-	85	33.333	ENSNBRG00000022534	znf646	77	38.261
ENSNBRG00000002542	-	83	41.270	ENSNBRG00000008827	znf319b	89	36.967
ENSNBRG00000002542	-	82	46.707	ENSNBRG00000002902	-	98	45.361
ENSNBRG00000002542	-	84	44.554	ENSNBRG00000024293	-	89	44.554
ENSNBRG00000002542	-	84	42.208	ENSNBRG00000024294	-	70	42.208
ENSNBRG00000002542	-	85	51.883	ENSNBRG00000000523	-	65	51.883
ENSNBRG00000002542	-	84	42.276	ENSNBRG00000015652	-	86	42.276
ENSNBRG00000002542	-	93	39.336	ENSNBRG00000015442	ZNF319	93	39.336
ENSNBRG00000002542	-	84	47.899	ENSNBRG00000016169	-	65	47.899
ENSNBRG00000002542	-	82	52.486	ENSNBRG00000016219	-	83	52.486
ENSNBRG00000002542	-	90	62.626	ENSNBRG00000004723	-	95	62.626
ENSNBRG00000002542	-	83	48.765	ENSNBRG00000021960	zbtb17	54	48.765
ENSNBRG00000002542	-	89	44.578	ENSNBRG00000021967	-	70	44.578
ENSNBRG00000002542	-	90	46.980	ENSNBRG00000024051	-	57	46.980
ENSNBRG00000002542	-	82	48.444	ENSNBRG00000024054	-	58	48.444
ENSNBRG00000002542	-	92	48.077	ENSNBRG00000014088	-	99	51.464
ENSNBRG00000002542	-	84	49.160	ENSNBRG00000019481	-	88	48.536
ENSNBRG00000002542	-	89	50.000	ENSNBRG00000000960	-	97	51.464
ENSNBRG00000002542	-	85	45.455	ENSNBRG00000007602	-	81	45.455
ENSNBRG00000002542	-	89	73.370	ENSNBRG00000001608	-	100	73.370
ENSNBRG00000002542	-	84	43.333	ENSNBRG00000000305	-	83	43.333
ENSNBRG00000002542	-	97	56.491	ENSNBRG00000005849	-	96	56.491
ENSNBRG00000002542	-	82	48.458	ENSNBRG00000004822	-	52	48.458
ENSNBRG00000002542	-	88	44.583	ENSNBRG00000024344	-	74	43.191
ENSNBRG00000002542	-	82	47.280	ENSNBRG00000024345	-	88	47.280
ENSNBRG00000002542	-	82	36.842	ENSNBRG00000003394	-	54	36.842
ENSNBRG00000002542	-	81	46.400	ENSNBRG00000004792	-	54	46.400
ENSNBRG00000002542	-	82	48.548	ENSNBRG00000023956	-	61	48.548
ENSNBRG00000002542	-	86	50.000	ENSNBRG00000019004	-	69	50.000
ENSNBRG00000002542	-	89	36.170	ENSNBRG00000011785	snai2	64	36.170
ENSNBRG00000002542	-	82	46.667	ENSNBRG00000023229	-	78	46.667
ENSNBRG00000002542	-	99	51.258	ENSNBRG00000009279	-	97	51.258
ENSNBRG00000002542	-	86	50.980	ENSNBRG00000024354	-	94	50.980
ENSNBRG00000002542	-	86	46.479	ENSNBRG00000024066	-	86	43.697
ENSNBRG00000002542	-	81	53.333	ENSNBRG00000000793	-	99	53.333
ENSNBRG00000002542	-	80	35.766	ENSNBRG00000013983	scrt1b	54	35.766
ENSNBRG00000002542	-	92	47.867	ENSNBRG00000007384	-	56	47.867
ENSNBRG00000002542	-	92	45.320	ENSNBRG00000003124	-	99	44.490
ENSNBRG00000002542	-	90	39.516	ENSNBRG00000013838	-	54	39.516
ENSNBRG00000002542	-	95	37.931	ENSNBRG00000009075	znf236	78	37.931
ENSNBRG00000002542	-	82	39.000	ENSNBRG00000005175	zbtb41	66	39.000
ENSNBRG00000002542	-	83	46.058	ENSNBRG00000003000	-	80	46.058

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002542	-	98	58.475	ENSACIG00000017644	-	95	58.475	Amphilophus_citrinellus
ENSNBRG00000002542	-	95	73.477	ENSACLG00000022497	-	98	73.477	Astatotilapia_calliptera
ENSNBRG00000002542	-	82	76.250	ENSACLG00000002844	-	82	76.250	Astatotilapia_calliptera
ENSNBRG00000002542	-	83	63.755	ENSACLG00000003546	-	58	63.755	Astatotilapia_calliptera
ENSNBRG00000002542	-	99	77.741	ENSACLG00000000487	-	92	76.151	Astatotilapia_calliptera
ENSNBRG00000002542	-	99	70.345	ENSACLG00000000473	-	90	70.345	Astatotilapia_calliptera
ENSNBRG00000002542	-	82	64.435	ENSHBUG00000006250	-	93	64.435	Haplochromis_burtoni
ENSNBRG00000002542	-	86	73.307	ENSMZEG00005012727	-	69	73.307	Maylandia_zebra
ENSNBRG00000002542	-	94	75.732	ENSMZEG00005021801	-	83	78.243	Maylandia_zebra
ENSNBRG00000002542	-	94	62.583	ENSMZEG00005020759	-	99	67.153	Maylandia_zebra
ENSNBRG00000002542	-	84	73.684	ENSONIG00000007886	-	99	73.684	Oreochromis_niloticus
ENSNBRG00000002542	-	99	67.466	ENSPNYG00000023637	-	84	67.466	Pundamilia_nyererei
ENSNBRG00000002542	-	90	74.905	ENSPNYG00000021571	-	87	74.905	Pundamilia_nyererei
ENSNBRG00000002542	-	97	77.032	ENSPNYG00000005777	-	82	77.032	Pundamilia_nyererei
ENSNBRG00000002542	-	99	73.770	ENSPNYG00000023916	-	93	66.090	Pundamilia_nyererei