EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002673 (Gene tree)
Gene ID: 102781835
Gene Symbol: gfi1aa
Alias: gfi1.1|gfi1a|zgc:113277
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2280 bases
Position: chrJH422283.1:8029038-8031317
Accession: 102781835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003338	zf-C2H2	PF00096.26	2.2e-23	1	5
ENSNBRP00000003338	zf-C2H2	PF00096.26	2.2e-23	2	5
ENSNBRP00000003338	zf-C2H2	PF00096.26	2.2e-23	3	5
ENSNBRP00000003338	zf-C2H2	PF00096.26	2.2e-23	4	5
ENSNBRP00000003338	zf-C2H2	PF00096.26	2.2e-23	5	5
ENSNBRP00000003338	zf-met	PF12874.7	2.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003457	-	1194	XM_006786791	ENSNBRP00000003338	397 (aa)	XP_006786854	UPI0003EC162D

Gene Model

Click here to download ENSNBRG00000002673's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002673's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002673	gfi1aa	100	62.687	ENSNBRG00000015774	gfi1ab	100	62.438
ENSNBRG00000002673	gfi1aa	53	42.647	ENSNBRG00000016666	-	96	42.647
ENSNBRG00000002673	gfi1aa	55	45.000	ENSNBRG00000000960	-	99	45.625
ENSNBRG00000002673	gfi1aa	63	42.857	ENSNBRG00000024345	-	94	42.857
ENSNBRG00000002673	gfi1aa	52	41.714	ENSNBRG00000024066	-	89	41.714
ENSNBRG00000002673	gfi1aa	53	43.750	ENSNBRG00000007311	-	95	43.750
ENSNBRG00000002673	gfi1aa	95	37.173	ENSNBRG00000008223	-	90	37.173
ENSNBRG00000002673	gfi1aa	52	50.820	ENSNBRG00000002902	-	97	50.820
ENSNBRG00000002673	gfi1aa	62	44.828	ENSNBRG00000001163	-	95	44.231
ENSNBRG00000002673	gfi1aa	53	44.898	ENSNBRG00000024054	-	60	44.898
ENSNBRG00000002673	gfi1aa	50	42.308	ENSNBRG00000008123	-	84	42.308
ENSNBRG00000002673	gfi1aa	50	41.912	ENSNBRG00000008827	znf319b	91	41.912
ENSNBRG00000002673	gfi1aa	52	42.857	ENSNBRG00000015873	-	99	42.169
ENSNBRG00000002673	gfi1aa	50	42.012	ENSNBRG00000004557	-	84	42.012
ENSNBRG00000002673	gfi1aa	56	42.202	ENSNBRG00000009128	-	57	42.202
ENSNBRG00000002673	gfi1aa	50	43.972	ENSNBRG00000024086	-	62	43.972
ENSNBRG00000002673	gfi1aa	50	34.409	ENSNBRG00000005175	zbtb41	66	34.409
ENSNBRG00000002673	gfi1aa	61	36.441	ENSNBRG00000011785	snai2	68	36.441
ENSNBRG00000002673	gfi1aa	69	42.458	ENSNBRG00000003250	-	93	42.458
ENSNBRG00000002673	gfi1aa	50	42.771	ENSNBRG00000010987	-	82	42.771
ENSNBRG00000002673	gfi1aa	51	38.323	ENSNBRG00000001761	-	58	38.323
ENSNBRG00000002673	gfi1aa	60	41.176	ENSNBRG00000015442	ZNF319	94	41.176
ENSNBRG00000002673	gfi1aa	65	44.086	ENSNBRG00000009075	znf236	81	44.086
ENSNBRG00000002673	gfi1aa	52	42.857	ENSNBRG00000001641	-	71	42.857
ENSNBRG00000002673	gfi1aa	64	40.000	ENSNBRG00000022534	znf646	56	40.000
ENSNBRG00000002673	gfi1aa	50	45.860	ENSNBRG00000015652	-	93	45.860
ENSNBRG00000002673	gfi1aa	50	40.678	ENSNBRG00000005849	-	96	40.678
ENSNBRG00000002673	gfi1aa	52	47.222	ENSNBRG00000003124	-	94	46.809
ENSNBRG00000002673	gfi1aa	78	45.783	ENSNBRG00000014088	-	98	47.115
ENSNBRG00000002673	gfi1aa	56	35.106	ENSNBRG00000018141	-	84	35.106

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002673	gfi1aa	100	89.975	ENSAPOG00000005043	gfi1aa	100	89.975	Acanthochromis_polyacanthus
ENSNBRG00000002673	gfi1aa	100	91.709	ENSACIG00000021378	gfi1aa	100	91.709	Amphilophus_citrinellus
ENSNBRG00000002673	gfi1aa	100	88.972	ENSAOCG00000022957	gfi1aa	100	88.972	Amphiprion_ocellaris
ENSNBRG00000002673	gfi1aa	100	89.223	ENSAPEG00000014539	gfi1aa	100	89.223	Amphiprion_percula
ENSNBRG00000002673	gfi1aa	100	84.000	ENSATEG00000019026	gfi1aa	99	87.900	Anabas_testudineus
ENSNBRG00000002673	gfi1aa	100	99.748	ENSACLG00000008641	gfi1aa	100	99.748	Astatotilapia_calliptera
ENSNBRG00000002673	gfi1aa	100	62.750	ENSDARG00000020746	gfi1aa	100	62.750	Danio_rerio
ENSNBRG00000002673	gfi1aa	100	95.718	ENSHBUG00000007389	gfi1aa	100	95.718	Haplochromis_burtoni
ENSNBRG00000002673	gfi1aa	100	77.136	ENSKMAG00000002148	gfi1aa	100	77.387	Kryptolebias_marmoratus
ENSNBRG00000002673	gfi1aa	100	79.052	ENSLBEG00000006603	gfi1aa	100	79.052	Labrus_bergylta
ENSNBRG00000002673	gfi1aa	100	80.500	ENSMAMG00000004896	gfi1aa	100	80.750	Mastacembelus_armatus
ENSNBRG00000002673	gfi1aa	100	99.748	ENSMZEG00005004578	gfi1aa	100	99.748	Maylandia_zebra
ENSNBRG00000002673	gfi1aa	83	77.551	ENSMMOG00000006167	gfi1aa	99	77.551	Mola_mola
ENSNBRG00000002673	gfi1aa	100	96.725	ENSPNYG00000002189	gfi1aa	100	96.725	Pundamilia_nyererei
ENSNBRG00000002673	gfi1aa	100	80.049	ENSSMAG00000006797	gfi1aa	100	80.542	Scophthalmus_maximus
ENSNBRG00000002673	gfi1aa	100	85.821	ENSSDUG00000011654	gfi1aa	100	85.821	Seriola_dumerili
ENSNBRG00000002673	gfi1aa	100	82.587	ENSSLDG00000016512	gfi1aa	100	82.587	Seriola_lalandi_dorsalis
ENSNBRG00000002673	gfi1aa	85	86.804	ENSSPAG00000000927	gfi1aa	94	86.804	Stegastes_partitus
ENSNBRG00000002673	gfi1aa	100	77.805	ENSTRUG00000004744	gfi1aa	100	77.805	Takifugu_rubripes