EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002684 (Gene tree)
Gene ID: 102797725
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2747 bases
Position: chrJH422286.1:1829847-1832593
Accession: 102797725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003328	MMR_HSR1	PF01926.23	8.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003446	-	1576	XM_006788189	ENSNBRP00000003328	234 (aa)	XP_006788252	UPI0003EC0861

Gene Model

Click here to download ENSNBRG00000002684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002684	zgc:101559	77	36.413	ENSNBRG00000015905	rab6bb	90	36.413
ENSNBRG00000002684	zgc:101559	84	38.119	ENSNBRG00000001056	rab15	91	38.119
ENSNBRG00000002684	zgc:101559	76	39.665	ENSNBRG00000023898	rab11ba	68	39.665
ENSNBRG00000002684	zgc:101559	73	40.000	ENSNBRG00000002726	-	77	40.000
ENSNBRG00000002684	zgc:101559	69	43.558	ENSNBRG00000005082	RAB39B	75	43.558
ENSNBRG00000002684	zgc:101559	77	40.884	ENSNBRG00000000372	rab11bb	80	40.884
ENSNBRG00000002684	zgc:101559	73	31.765	ENSNBRG00000017793	RAB17	74	31.765
ENSNBRG00000002684	zgc:101559	73	40.936	ENSNBRG00000011763	rab5aa	77	40.936
ENSNBRG00000002684	zgc:101559	73	42.442	ENSNBRG00000002778	RAB15	79	42.442
ENSNBRG00000002684	zgc:101559	85	35.749	ENSNBRG00000002772	-	97	35.749
ENSNBRG00000002684	zgc:101559	72	41.667	ENSNBRG00000022702	rab41	77	41.667
ENSNBRG00000002684	zgc:101559	84	33.333	ENSNBRG00000011872	-	90	33.333
ENSNBRG00000002684	zgc:101559	74	33.143	ENSNBRG00000024340	RAB9A	80	33.143
ENSNBRG00000002684	zgc:101559	71	39.157	ENSNBRG00000011607	rab25a	76	39.157
ENSNBRG00000002684	zgc:101559	74	47.399	ENSNBRG00000006202	zgc:171927	78	47.399
ENSNBRG00000002684	zgc:101559	85	36.634	ENSNBRG00000023214	si:dkey-13a21.4	95	36.634
ENSNBRG00000002684	zgc:101559	76	47.753	ENSNBRG00000002082	rab30	77	47.753
ENSNBRG00000002684	zgc:101559	95	56.054	ENSNBRG00000022235	rab33a	93	56.054
ENSNBRG00000002684	zgc:101559	77	40.331	ENSNBRG00000023885	-	80	40.331
ENSNBRG00000002684	zgc:101559	74	41.379	ENSNBRG00000021487	rab42a	64	41.379
ENSNBRG00000002684	zgc:101559	77	30.688	ENSNBRG00000006552	nkiras1	96	30.688
ENSNBRG00000002684	zgc:101559	64	38.312	ENSNBRG00000008714	RAB29	67	38.312
ENSNBRG00000002684	zgc:101559	77	39.560	ENSNBRG00000014428	rab12	73	39.560
ENSNBRG00000002684	zgc:101559	85	36.232	ENSNBRG00000021829	RAB7A	97	36.232
ENSNBRG00000002684	zgc:101559	63	35.811	ENSNBRG00000013795	rheb	79	35.811
ENSNBRG00000002684	zgc:101559	71	40.361	ENSNBRG00000008137	rab18b	79	40.361
ENSNBRG00000002684	zgc:101559	64	35.714	ENSNBRG00000003915	rasl11b	77	33.161
ENSNBRG00000002684	zgc:101559	63	40.816	ENSNBRG00000013507	rab18a	71	40.816
ENSNBRG00000002684	zgc:101559	67	36.306	ENSNBRG00000004403	kras	87	37.059
ENSNBRG00000002684	zgc:101559	71	34.940	ENSNBRG00000013691	rab23	71	35.811
ENSNBRG00000002684	zgc:101559	79	38.710	ENSNBRG00000012893	rab11a	86	38.710
ENSNBRG00000002684	zgc:101559	73	39.766	ENSNBRG00000018165	rab5c	75	39.766
ENSNBRG00000002684	zgc:101559	63	35.135	ENSNBRG00000016978	rhebl1	79	35.135
ENSNBRG00000002684	zgc:101559	73	40.000	ENSNBRG00000005542	-	77	40.000
ENSNBRG00000002684	zgc:101559	86	31.858	ENSNBRG00000011713	rasl11a	87	31.858
ENSNBRG00000002684	zgc:101559	84	39.594	ENSNBRG00000004124	rab13	95	39.594
ENSNBRG00000002684	zgc:101559	71	41.317	ENSNBRG00000001241	rab2a	76	41.317
ENSNBRG00000002684	zgc:101559	69	35.404	ENSNBRG00000014613	si:ch73-116o1.2	90	34.359
ENSNBRG00000002684	zgc:101559	75	47.727	ENSNBRG00000020492	-	83	47.727
ENSNBRG00000002684	zgc:101559	80	37.766	ENSNBRG00000005116	rab11al	86	37.097
ENSNBRG00000002684	zgc:101559	70	30.539	ENSNBRG00000022552	dnajc27	61	30.539
ENSNBRG00000002684	zgc:101559	73	39.181	ENSNBRG00000016922	-	75	39.181
ENSNBRG00000002684	zgc:101559	67	59.006	ENSNBRG00000017996	-	69	59.006
ENSNBRG00000002684	zgc:101559	72	41.071	ENSNBRG00000016716	rab6a	78	41.071
ENSNBRG00000002684	zgc:101559	75	47.727	ENSNBRG00000003873	rab1ba	83	47.727
ENSNBRG00000002684	zgc:101559	66	43.871	ENSNBRG00000018106	-	72	43.871
ENSNBRG00000002684	zgc:101559	68	39.024	ENSNBRG00000013940	rab9b	72	39.024
ENSNBRG00000002684	zgc:101559	85	60.194	ENSNBRG00000007077	rab33ba	80	60.194
ENSNBRG00000002684	zgc:101559	79	42.935	ENSNBRG00000008930	si:dkey-16l2.16	87	42.347
ENSNBRG00000002684	zgc:101559	70	37.278	ENSNBRG00000002825	-	78	37.278
ENSNBRG00000002684	zgc:101559	75	37.143	ENSNBRG00000013673	rab6ba	82	37.143
ENSNBRG00000002684	zgc:101559	69	36.310	ENSNBRG00000007544	rab32b	76	36.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002684	zgc:101559	100	89.744	ENSAPOG00000007503	zgc:101559	100	89.744	Acanthochromis_polyacanthus
ENSNBRG00000002684	zgc:101559	90	95.238	ENSACIG00000021459	zgc:101559	92	95.238	Amphilophus_citrinellus
ENSNBRG00000002684	zgc:101559	100	89.744	ENSAOCG00000024675	zgc:101559	100	89.744	Amphiprion_ocellaris
ENSNBRG00000002684	zgc:101559	100	89.744	ENSAPEG00000005176	zgc:101559	100	89.744	Amphiprion_percula
ENSNBRG00000002684	zgc:101559	100	87.179	ENSATEG00000007761	zgc:101559	100	87.179	Anabas_testudineus
ENSNBRG00000002684	zgc:101559	98	98.261	ENSACLG00000027006	zgc:101559	97	98.261	Astatotilapia_calliptera
ENSNBRG00000002684	zgc:101559	100	73.640	ENSAMXG00000040460	zgc:101559	94	73.640	Astyanax_mexicanus
ENSNBRG00000002684	zgc:101559	100	80.769	ENSCSEG00000006243	zgc:101559	100	80.769	Cynoglossus_semilaevis
ENSNBRG00000002684	zgc:101559	100	84.188	ENSCVAG00000019227	zgc:101559	100	84.188	Cyprinodon_variegatus
ENSNBRG00000002684	zgc:101559	100	76.596	ENSDARG00000003257	zgc:101559	100	76.596	Danio_rerio
ENSNBRG00000002684	zgc:101559	100	83.761	ENSFHEG00000011483	zgc:101559	100	83.761	Fundulus_heteroclitus
ENSNBRG00000002684	zgc:101559	91	82.629	ENSGMOG00000011665	zgc:101559	100	82.629	Gadus_morhua
ENSNBRG00000002684	zgc:101559	100	82.051	ENSGAFG00000021202	zgc:101559	100	82.051	Gambusia_affinis
ENSNBRG00000002684	zgc:101559	91	85.446	ENSGACG00000001725	zgc:101559	91	85.446	Gasterosteus_aculeatus
ENSNBRG00000002684	zgc:101559	100	99.145	ENSHBUG00000007827	zgc:101559	100	99.145	Haplochromis_burtoni
ENSNBRG00000002684	zgc:101559	100	76.271	ENSHCOG00000009133	zgc:101559	100	77.731	Hippocampus_comes
ENSNBRG00000002684	zgc:101559	100	70.085	ENSIPUG00000022394	zgc:101559	100	70.085	Ictalurus_punctatus
ENSNBRG00000002684	zgc:101559	100	82.553	ENSKMAG00000002862	zgc:101559	100	82.553	Kryptolebias_marmoratus
ENSNBRG00000002684	zgc:101559	100	88.462	ENSLBEG00000025798	zgc:101559	100	88.462	Labrus_bergylta
ENSNBRG00000002684	zgc:101559	86	67.164	ENSLACG00000011557	zgc:101559	87	67.164	Latimeria_chalumnae
ENSNBRG00000002684	zgc:101559	100	70.513	ENSLOCG00000005904	zgc:101559	99	70.513	Lepisosteus_oculatus
ENSNBRG00000002684	zgc:101559	100	88.889	ENSMAMG00000017431	zgc:101559	100	88.889	Mastacembelus_armatus
ENSNBRG00000002684	zgc:101559	100	99.145	ENSMZEG00005021778	zgc:101559	100	99.145	Maylandia_zebra
ENSNBRG00000002684	zgc:101559	100	83.333	ENSMMOG00000019779	zgc:101559	100	83.333	Mola_mola
ENSNBRG00000002684	zgc:101559	100	84.615	ENSMALG00000003712	zgc:101559	100	84.615	Monopterus_albus
ENSNBRG00000002684	zgc:101559	100	99.145	ENSONIG00000006715	-	100	99.145	Oreochromis_niloticus
ENSNBRG00000002684	zgc:101559	100	82.906	ENSORLG00000030642	zgc:101559	100	82.906	Oryzias_latipes
ENSNBRG00000002684	zgc:101559	100	82.051	ENSORLG00020012685	zgc:101559	100	82.051	Oryzias_latipes_hni
ENSNBRG00000002684	zgc:101559	100	82.479	ENSORLG00015016047	zgc:101559	100	82.479	Oryzias_latipes_hsok
ENSNBRG00000002684	zgc:101559	100	84.615	ENSOMEG00000013128	zgc:101559	100	84.615	Oryzias_melastigma
ENSNBRG00000002684	zgc:101559	100	69.658	ENSPKIG00000013397	zgc:101559	98	69.658	Paramormyrops_kingsleyae
ENSNBRG00000002684	zgc:101559	100	84.188	ENSPFOG00000009101	-	100	84.188	Poecilia_formosa
ENSNBRG00000002684	zgc:101559	100	84.188	ENSPLAG00000020627	zgc:101559	100	84.188	Poecilia_latipinna
ENSNBRG00000002684	zgc:101559	100	84.188	ENSPMEG00000010152	zgc:101559	100	84.188	Poecilia_mexicana
ENSNBRG00000002684	zgc:101559	100	83.761	ENSPREG00000007017	zgc:101559	100	83.761	Poecilia_reticulata
ENSNBRG00000002684	zgc:101559	100	99.145	ENSPNYG00000012922	zgc:101559	100	99.145	Pundamilia_nyererei
ENSNBRG00000002684	zgc:101559	99	75.536	ENSPNAG00000017856	zgc:101559	100	75.536	Pygocentrus_nattereri
ENSNBRG00000002684	zgc:101559	96	71.429	ENSSFOG00015006175	zgc:101559	96	71.429	Scleropages_formosus
ENSNBRG00000002684	zgc:101559	99	82.833	ENSSMAG00000002229	zgc:101559	99	82.833	Scophthalmus_maximus
ENSNBRG00000002684	zgc:101559	100	89.744	ENSSDUG00000008151	zgc:101559	100	89.744	Seriola_dumerili
ENSNBRG00000002684	zgc:101559	100	89.744	ENSSLDG00000019214	zgc:101559	100	89.744	Seriola_lalandi_dorsalis
ENSNBRG00000002684	zgc:101559	100	90.598	ENSSPAG00000006404	zgc:101559	100	90.598	Stegastes_partitus
ENSNBRG00000002684	zgc:101559	100	80.769	ENSTRUG00000009903	zgc:101559	100	80.769	Takifugu_rubripes
ENSNBRG00000002684	zgc:101559	93	81.567	ENSTNIG00000015000	zgc:101559	92	81.567	Tetraodon_nigroviridis
ENSNBRG00000002684	zgc:101559	100	83.761	ENSXCOG00000018683	zgc:101559	100	83.761	Xiphophorus_couchianus
ENSNBRG00000002684	zgc:101559	100	83.761	ENSXMAG00000011171	zgc:101559	100	83.761	Xiphophorus_maculatus