EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002940 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 5261 bases
Position: chrJH422502.1:197769-203029
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003680	MMR_HSR1	PF01926.23	4.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003805	-	1113	-	ENSNBRP00000003680	370 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000002940's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002940's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002940	-	54	50.943	ENSNBRG00000019092	-	59	50.943
ENSNBRG00000002940	-	57	67.299	ENSNBRG00000003452	-	61	67.299
ENSNBRG00000002940	-	54	30.435	ENSNBRG00000020578	-	97	30.435
ENSNBRG00000002940	-	55	32.589	ENSNBRG00000002136	-	74	32.589
ENSNBRG00000002940	-	50	67.027	ENSNBRG00000006189	-	57	67.027
ENSNBRG00000002940	-	56	62.085	ENSNBRG00000005934	-	59	62.085
ENSNBRG00000002940	-	51	33.684	ENSNBRG00000009365	-	83	33.684
ENSNBRG00000002940	-	50	45.161	ENSNBRG00000020282	-	75	55.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002940	-	51	71.839	ENSAOCG00000013686	-	83	71.839	Amphiprion_ocellaris
ENSNBRG00000002940	-	50	69.355	ENSAOCG00000022545	-	54	69.355	Amphiprion_ocellaris
ENSNBRG00000002940	-	69	48.718	ENSATEG00000011336	-	56	48.718	Anabas_testudineus
ENSNBRG00000002940	-	51	68.254	ENSACLG00000005066	-	67	68.254	Astatotilapia_calliptera
ENSNBRG00000002940	-	62	50.649	ENSACLG00000024857	-	52	50.649	Astatotilapia_calliptera
ENSNBRG00000002940	-	50	61.957	ENSACLG00000009780	-	56	61.957	Astatotilapia_calliptera
ENSNBRG00000002940	-	50	50.543	ENSAMXG00000030926	-	51	50.543	Astyanax_mexicanus
ENSNBRG00000002940	-	50	59.239	ENSAMXG00000037741	-	73	59.239	Astyanax_mexicanus
ENSNBRG00000002940	-	55	42.453	ENSAMXG00000030715	-	53	42.453	Astyanax_mexicanus
ENSNBRG00000002940	-	51	47.619	ENSAMXG00000039685	-	79	47.619	Astyanax_mexicanus
ENSNBRG00000002940	-	58	62.644	ENSCVAG00000018481	-	52	62.644	Cyprinodon_variegatus
ENSNBRG00000002940	-	58	50.926	ENSDARG00000086048	si:ch211-229i14.2	60	50.926	Danio_rerio
ENSNBRG00000002940	-	64	48.458	ENSELUG00000015076	si:ch211-229i14.2	51	48.458	Esox_lucius
ENSNBRG00000002940	-	50	52.717	ENSELUG00000015135	-	50	53.488	Esox_lucius
ENSNBRG00000002940	-	51	57.143	ENSELUG00000015106	-	51	57.143	Esox_lucius
ENSNBRG00000002940	-	54	55.978	ENSELUG00000005405	-	54	57.386	Esox_lucius
ENSNBRG00000002940	-	50	31.980	ENSGMOG00000006359	-	79	33.520	Gadus_morhua
ENSNBRG00000002940	-	50	61.290	ENSGAFG00000015917	-	51	61.290	Gambusia_affinis
ENSNBRG00000002940	-	54	68.000	ENSHBUG00000020672	-	92	68.000	Haplochromis_burtoni
ENSNBRG00000002940	-	50	54.762	ENSIPUG00000004131	-	55	55.758	Ictalurus_punctatus
ENSNBRG00000002940	-	52	34.000	ENSLBEG00000003708	-	59	37.572	Labrus_bergylta
ENSNBRG00000002940	-	68	54.237	ENSMAMG00000018061	-	66	54.237	Mastacembelus_armatus
ENSNBRG00000002940	-	51	49.468	ENSMALG00000004282	-	59	49.468	Monopterus_albus
ENSNBRG00000002940	-	53	71.429	ENSONIG00000011313	-	66	71.429	Oreochromis_niloticus
ENSNBRG00000002940	-	52	80.928	ENSONIG00000000233	-	58	80.928	Oreochromis_niloticus
ENSNBRG00000002940	-	50	98.387	ENSONIG00000000314	-	72	98.387	Oreochromis_niloticus
ENSNBRG00000002940	-	58	72.330	ENSONIG00000014210	-	79	72.330	Oreochromis_niloticus
ENSNBRG00000002940	-	52	63.068	ENSOMEG00000009393	-	56	63.068	Oryzias_melastigma
ENSNBRG00000002940	-	50	62.903	ENSPFOG00000024835	-	56	62.903	Poecilia_formosa
ENSNBRG00000002940	-	51	58.824	ENSPLAG00000000052	-	79	58.824	Poecilia_latipinna
ENSNBRG00000002940	-	56	65.341	ENSPMEG00000009705	-	74	65.341	Poecilia_mexicana
ENSNBRG00000002940	-	52	69.540	ENSPREG00000017114	-	54	69.540	Poecilia_reticulata
ENSNBRG00000002940	-	50	71.505	ENSPNYG00000000712	-	51	71.505	Pundamilia_nyererei
ENSNBRG00000002940	-	55	69.268	ENSPNYG00000023994	-	63	79.310	Pundamilia_nyererei
ENSNBRG00000002940	-	60	63.584	ENSPNYG00000008507	-	54	63.584	Pundamilia_nyererei
ENSNBRG00000002940	-	51	50.794	ENSSDUG00000021006	-	80	50.794	Seriola_dumerili
ENSNBRG00000002940	-	50	53.226	ENSSDUG00000005095	-	51	53.226	Seriola_dumerili
ENSNBRG00000002940	-	50	73.118	ENSSPAG00000005977	-	54	73.118	Stegastes_partitus
ENSNBRG00000002940	-	50	58.602	ENSXMAG00000027923	-	55	58.602	Xiphophorus_maculatus