EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000002998 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5381 bases
Position: chrJH422502.1:350746-356126
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003811	PARP	PF00644.20	1.5e-31	1	1
ENSNBRP00000003796	PARP	PF00644.20	5.8e-31	1	1
ENSNBRP00000003766	PARP	PF00644.20	8.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003926	-	1530	-	ENSNBRP00000003796	509 (aa)	-	-
ENSNBRT00000003942	-	819	-	ENSNBRP00000003811	272 (aa)	-	-
ENSNBRT00000003895	-	1110	-	ENSNBRP00000003766	369 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000002998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000002998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000002998	-	71	41.414	ENSNBRG00000003877	-	85	38.889
ENSNBRG00000002998	-	89	38.602	ENSNBRG00000005232	-	69	38.602
ENSNBRG00000002998	-	72	42.289	ENSNBRG00000004017	-	90	44.845
ENSNBRG00000002998	-	67	43.243	ENSNBRG00000004048	-	96	43.243
ENSNBRG00000002998	-	100	65.441	ENSNBRG00000003116	-	96	63.265
ENSNBRG00000002998	-	64	31.937	ENSNBRG00000005708	parp11	68	31.937
ENSNBRG00000002998	-	81	34.167	ENSNBRG00000005665	PARP11	82	34.298
ENSNBRG00000002998	-	58	37.195	ENSNBRG00000010331	-	70	37.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000002998	-	65	83.051	ENSACIG00000008604	-	84	83.051	Amphilophus_citrinellus
ENSNBRG00000002998	-	69	70.588	ENSACIG00000001702	-	87	68.500	Amphilophus_citrinellus
ENSNBRG00000002998	-	87	69.782	ENSACIG00000014929	-	86	69.782	Amphilophus_citrinellus
ENSNBRG00000002998	-	73	48.162	ENSACIG00000005931	-	92	48.162	Amphilophus_citrinellus
ENSNBRG00000002998	-	100	64.835	ENSAOCG00000020608	-	100	58.412	Amphiprion_ocellaris
ENSNBRG00000002998	-	100	65.201	ENSAPEG00000022069	-	96	59.243	Amphiprion_percula
ENSNBRG00000002998	-	100	65.818	ENSATEG00000012173	-	89	64.343	Anabas_testudineus
ENSNBRG00000002998	-	100	72.161	ENSACLG00000005600	-	100	72.303	Astatotilapia_calliptera
ENSNBRG00000002998	-	100	97.059	ENSACLG00000005627	-	100	92.784	Astatotilapia_calliptera
ENSNBRG00000002998	-	99	55.311	ENSAMXG00000031328	-	89	50.811	Astyanax_mexicanus
ENSNBRG00000002998	-	92	63.636	ENSAMXG00000010091	-	75	47.037	Astyanax_mexicanus
ENSNBRG00000002998	-	99	59.926	ENSCSEG00000009834	-	99	60.241	Cynoglossus_semilaevis
ENSNBRG00000002998	-	100	62.132	ENSCVAG00000009352	-	86	60.432	Cyprinodon_variegatus
ENSNBRG00000002998	-	90	58.871	ENSCVAG00000000686	-	99	58.871	Cyprinodon_variegatus
ENSNBRG00000002998	-	93	33.962	ENSDARG00000098398	CABZ01079480.1	52	33.962	Danio_rerio
ENSNBRG00000002998	-	99	61.172	ENSELUG00000013643	-	74	52.974	Esox_lucius
ENSNBRG00000002998	-	100	52.574	ENSFHEG00000011780	-	89	52.574	Fundulus_heteroclitus
ENSNBRG00000002998	-	98	33.688	ENSGMOG00000011217	-	54	33.688	Gadus_morhua
ENSNBRG00000002998	-	100	63.971	ENSGAFG00000015867	-	99	63.971	Gambusia_affinis
ENSNBRG00000002998	-	100	71.324	ENSHBUG00000015159	-	96	69.072	Haplochromis_burtoni
ENSNBRG00000002998	-	87	79.385	ENSHBUG00000013327	-	86	79.385	Haplochromis_burtoni
ENSNBRG00000002998	-	100	94.853	ENSHBUG00000015143	-	100	90.909	Haplochromis_burtoni
ENSNBRG00000002998	-	99	56.618	ENSIPUG00000019562	-	89	56.748	Ictalurus_punctatus
ENSNBRG00000002998	-	99	32.374	ENSIPUG00000001876	-	57	32.374	Ictalurus_punctatus
ENSNBRG00000002998	-	100	67.399	ENSKMAG00000010882	-	100	60.556	Kryptolebias_marmoratus
ENSNBRG00000002998	-	98	68.539	ENSMAMG00000018261	-	90	68.539	Mastacembelus_armatus
ENSNBRG00000002998	-	99	68.773	ENSMAMG00000018192	-	100	63.421	Mastacembelus_armatus
ENSNBRG00000002998	-	100	69.963	ENSMZEG00005002038	-	87	69.973	Maylandia_zebra
ENSNBRG00000002998	-	100	77.941	ENSMZEG00005027852	-	99	66.865	Maylandia_zebra
ENSNBRG00000002998	-	100	95.588	ENSMZEG00005027858	-	100	95.588	Maylandia_zebra
ENSNBRG00000002998	-	95	71.711	ENSMMOG00000010419	-	100	62.431	Mola_mola
ENSNBRG00000002998	-	99	64.338	ENSMALG00000004165	-	92	63.441	Monopterus_albus
ENSNBRG00000002998	-	100	79.779	ENSONIG00000000241	-	100	67.245	Oreochromis_niloticus
ENSNBRG00000002998	-	100	62.500	ENSORLG00000017404	-	95	59.091	Oryzias_latipes
ENSNBRG00000002998	-	100	61.397	ENSORLG00020014046	-	100	62.162	Oryzias_latipes_hni
ENSNBRG00000002998	-	100	63.235	ENSORLG00020014210	-	96	57.047	Oryzias_latipes_hni
ENSNBRG00000002998	-	100	61.765	ENSORLG00015004157	-	100	62.548	Oryzias_latipes_hsok
ENSNBRG00000002998	-	100	62.132	ENSORLG00015004253	-	94	61.246	Oryzias_latipes_hsok
ENSNBRG00000002998	-	83	66.116	ENSOMEG00000009483	-	89	58.104	Oryzias_melastigma
ENSNBRG00000002998	-	100	62.816	ENSOMEG00000009413	-	100	62.816	Oryzias_melastigma
ENSNBRG00000002998	-	98	33.566	ENSPKIG00000004064	-	91	40.118	Paramormyrops_kingsleyae
ENSNBRG00000002998	-	99	61.397	ENSPMGG00000011629	-	95	61.397	Periophthalmus_magnuspinnatus
ENSNBRG00000002998	-	98	62.703	ENSPLAG00000022742	-	95	62.703	Poecilia_latipinna
ENSNBRG00000002998	-	99	64.925	ENSPMEG00000003192	-	100	64.095	Poecilia_mexicana
ENSNBRG00000002998	-	99	64.552	ENSPREG00000017145	-	98	64.552	Poecilia_reticulata
ENSNBRG00000002998	-	100	78.676	ENSPNYG00000003575	-	100	77.151	Pundamilia_nyererei
ENSNBRG00000002998	-	96	77.099	ENSPNYG00000023890	-	90	73.665	Pundamilia_nyererei
ENSNBRG00000002998	-	100	70.956	ENSPNYG00000008208	-	96	68.729	Pundamilia_nyererei
ENSNBRG00000002998	-	100	88.172	ENSPNYG00000006865	-	74	74.667	Pundamilia_nyererei
ENSNBRG00000002998	-	99	56.985	ENSPNAG00000004111	-	92	56.985	Pygocentrus_nattereri
ENSNBRG00000002998	-	99	49.635	ENSPNAG00000005029	-	99	50.000	Pygocentrus_nattereri
ENSNBRG00000002998	-	82	49.020	ENSPNAG00000005968	-	60	33.731	Pygocentrus_nattereri
ENSNBRG00000002998	-	99	56.410	ENSPNAG00000026750	-	91	56.410	Pygocentrus_nattereri
ENSNBRG00000002998	-	99	33.571	ENSPNAG00000006111	-	100	30.375	Pygocentrus_nattereri
ENSNBRG00000002998	-	99	41.509	ENSSFOG00015019732	-	71	47.619	Scleropages_formosus
ENSNBRG00000002998	-	100	67.766	ENSSMAG00000016922	-	83	66.978	Scophthalmus_maximus
ENSNBRG00000002998	-	100	69.597	ENSSDUG00000013560	-	81	60.714	Seriola_dumerili
ENSNBRG00000002998	-	99	67.897	ENSSLDG00000011620	-	92	67.897	Seriola_lalandi_dorsalis
ENSNBRG00000002998	-	99	65.428	ENSSPAG00000014708	-	93	69.231	Stegastes_partitus
ENSNBRG00000002998	-	100	52.727	ENSTRUG00000010891	-	100	52.727	Takifugu_rubripes
ENSNBRG00000002998	-	100	54.212	ENSTNIG00000018877	-	100	46.654	Tetraodon_nigroviridis
ENSNBRG00000002998	-	99	64.179	ENSXCOG00000012535	-	98	64.179	Xiphophorus_couchianus
ENSNBRG00000002998	-	99	64.179	ENSXMAG00000015158	-	100	62.500	Xiphophorus_maculatus