EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 65174 bases
Position: chrJH422540.1:218294-283467
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003748	zf-C2H2	PF00096.26	2e-33	1	5
ENSNBRP00000003748	zf-C2H2	PF00096.26	2e-33	2	5
ENSNBRP00000003748	zf-C2H2	PF00096.26	2e-33	3	5
ENSNBRP00000003748	zf-C2H2	PF00096.26	2e-33	4	5
ENSNBRP00000003748	zf-C2H2	PF00096.26	2e-33	5	5
ENSNBRP00000003748	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003874	-	1044	-	ENSNBRP00000003748	347 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000003000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003000	-	81	45.714	ENSNBRG00000000708	-	84	45.714
ENSNBRG00000003000	-	97	42.222	ENSNBRG00000006411	-	94	42.222
ENSNBRG00000003000	-	80	47.778	ENSNBRG00000009128	-	54	47.778
ENSNBRG00000003000	-	82	51.154	ENSNBRG00000000577	-	77	51.154
ENSNBRG00000003000	-	83	50.769	ENSNBRG00000006125	-	93	50.000
ENSNBRG00000003000	-	82	49.029	ENSNBRG00000013604	-	77	49.029
ENSNBRG00000003000	-	95	44.667	ENSNBRG00000021967	-	66	44.667
ENSNBRG00000003000	-	68	45.228	ENSNBRG00000024054	-	58	45.228
ENSNBRG00000003000	-	82	40.782	ENSNBRG00000024051	-	52	34.701
ENSNBRG00000003000	-	80	46.899	ENSNBRG00000016169	-	67	46.899
ENSNBRG00000003000	-	82	44.030	ENSNBRG00000000305	-	87	45.070
ENSNBRG00000003000	-	82	41.606	ENSNBRG00000012391	gfi1b	52	42.857
ENSNBRG00000003000	-	83	41.472	ENSNBRG00000016550	-	91	40.816
ENSNBRG00000003000	-	86	40.385	ENSNBRG00000004976	prdm5	72	40.385
ENSNBRG00000003000	-	82	44.755	ENSNBRG00000008106	-	92	44.755
ENSNBRG00000003000	-	80	48.052	ENSNBRG00000019481	-	92	48.052
ENSNBRG00000003000	-	80	48.276	ENSNBRG00000000523	-	66	47.018
ENSNBRG00000003000	-	85	49.091	ENSNBRG00000019770	-	98	49.091
ENSNBRG00000003000	-	79	44.939	ENSNBRG00000024344	-	72	44.939
ENSNBRG00000003000	-	82	57.241	ENSNBRG00000024345	-	90	57.241
ENSNBRG00000003000	-	76	53.535	ENSNBRG00000024066	-	98	44.255
ENSNBRG00000003000	-	81	44.792	ENSNBRG00000008223	-	86	45.238
ENSNBRG00000003000	-	83	48.299	ENSNBRG00000008123	-	80	48.299
ENSNBRG00000003000	-	80	53.333	ENSNBRG00000010987	-	76	53.333
ENSNBRG00000003000	-	82	45.522	ENSNBRG00000023956	-	62	45.522
ENSNBRG00000003000	-	78	38.462	ENSNBRG00000013983	scrt1b	51	39.535
ENSNBRG00000003000	-	80	51.724	ENSNBRG00000000960	-	96	51.724
ENSNBRG00000003000	-	87	46.429	ENSNBRG00000009811	-	88	46.429
ENSNBRG00000003000	-	84	41.497	ENSNBRG00000004523	-	93	41.497
ENSNBRG00000003000	-	80	42.545	ENSNBRG00000005823	-	81	42.545
ENSNBRG00000003000	-	86	41.313	ENSNBRG00000016564	-	81	41.313
ENSNBRG00000003000	-	85	42.857	ENSNBRG00000002946	-	55	42.857
ENSNBRG00000003000	-	81	37.566	ENSNBRG00000015442	ZNF319	89	37.566
ENSNBRG00000003000	-	81	46.262	ENSNBRG00000001608	-	95	46.262
ENSNBRG00000003000	-	80	46.457	ENSNBRG00000015652	-	85	45.418
ENSNBRG00000003000	-	73	40.367	ENSNBRG00000003394	-	52	40.367
ENSNBRG00000003000	-	80	47.253	ENSNBRG00000023960	-	64	47.253
ENSNBRG00000003000	-	82	52.525	ENSNBRG00000015873	-	96	45.411
ENSNBRG00000003000	-	80	50.649	ENSNBRG00000007276	-	50	50.649
ENSNBRG00000003000	-	80	44.828	ENSNBRG00000004381	-	82	44.828
ENSNBRG00000003000	-	84	51.370	ENSNBRG00000003124	-	92	50.000
ENSNBRG00000003000	-	84	45.035	ENSNBRG00000002902	-	99	45.745
ENSNBRG00000003000	-	81	32.963	ENSNBRG00000008827	znf319b	88	32.963
ENSNBRG00000003000	-	86	32.540	ENSNBRG00000020314	si:dkey-89b17.4	82	31.879
ENSNBRG00000003000	-	82	47.191	ENSNBRG00000004723	-	86	47.191
ENSNBRG00000003000	-	80	51.667	ENSNBRG00000000793	-	100	51.667
ENSNBRG00000003000	-	82	47.126	ENSNBRG00000010194	-	67	42.793
ENSNBRG00000003000	-	94	44.492	ENSNBRG00000000321	-	95	43.673
ENSNBRG00000003000	-	75	38.415	ENSNBRG00000013838	-	50	38.415
ENSNBRG00000003000	-	99	37.500	ENSNBRG00000022534	znf646	68	36.719
ENSNBRG00000003000	-	82	42.593	ENSNBRG00000018141	-	65	42.593
ENSNBRG00000003000	-	82	40.000	ENSNBRG00000005175	zbtb41	64	40.000
ENSNBRG00000003000	-	81	45.594	ENSNBRG00000024179	-	62	45.594
ENSNBRG00000003000	-	83	39.806	ENSNBRG00000009279	-	90	39.806
ENSNBRG00000003000	-	80	47.191	ENSNBRG00000004792	-	53	47.191
ENSNBRG00000003000	-	79	40.244	ENSNBRG00000007221	scrt2	50	40.244
ENSNBRG00000003000	-	80	45.882	ENSNBRG00000024046	-	54	45.882
ENSNBRG00000003000	-	76	51.007	ENSNBRG00000019004	-	61	51.007
ENSNBRG00000003000	-	82	50.794	ENSNBRG00000004822	-	52	50.794
ENSNBRG00000003000	-	92	39.918	ENSNBRG00000009815	-	85	42.222
ENSNBRG00000003000	-	86	48.413	ENSNBRG00000007311	-	81	50.641
ENSNBRG00000003000	-	82	40.351	ENSNBRG00000010351	-	88	40.351
ENSNBRG00000003000	-	82	42.049	ENSNBRG00000005796	-	95	42.049
ENSNBRG00000003000	-	75	35.106	ENSNBRG00000019987	GZF1	53	35.357
ENSNBRG00000003000	-	83	45.833	ENSNBRG00000024354	-	96	45.333
ENSNBRG00000003000	-	95	46.825	ENSNBRG00000016282	-	91	50.676
ENSNBRG00000003000	-	79	45.174	ENSNBRG00000024048	-	82	45.174
ENSNBRG00000003000	-	85	48.760	ENSNBRG00000021237	-	89	48.760
ENSNBRG00000003000	-	80	49.115	ENSNBRG00000024014	-	72	45.059
ENSNBRG00000003000	-	80	45.956	ENSNBRG00000024019	-	91	45.956
ENSNBRG00000003000	-	80	46.058	ENSNBRG00000002542	-	83	46.058
ENSNBRG00000003000	-	78	62.162	ENSNBRG00000010405	-	80	62.162
ENSNBRG00000003000	-	80	53.488	ENSNBRG00000023229	-	80	53.488
ENSNBRG00000003000	-	81	44.860	ENSNBRG00000016603	-	88	45.070
ENSNBRG00000003000	-	80	50.562	ENSNBRG00000016234	-	65	50.562
ENSNBRG00000003000	-	80	48.305	ENSNBRG00000024020	-	55	48.305
ENSNBRG00000003000	-	72	36.538	ENSNBRG00000014403	-	56	36.538
ENSNBRG00000003000	-	86	44.762	ENSNBRG00000009075	znf236	77	48.315
ENSNBRG00000003000	-	82	44.776	ENSNBRG00000001761	-	56	44.776
ENSNBRG00000003000	-	85	55.422	ENSNBRG00000013501	-	77	55.422
ENSNBRG00000003000	-	82	42.424	ENSNBRG00000006112	-	55	42.424
ENSNBRG00000003000	-	82	42.857	ENSNBRG00000005805	-	94	44.330
ENSNBRG00000003000	-	82	50.581	ENSNBRG00000000492	-	72	50.581
ENSNBRG00000003000	-	80	51.020	ENSNBRG00000001641	-	72	49.682
ENSNBRG00000003000	-	80	50.000	ENSNBRG00000013583	-	90	50.909
ENSNBRG00000003000	-	79	53.782	ENSNBRG00000022241	-	80	53.782
ENSNBRG00000003000	-	80	50.000	ENSNBRG00000003250	-	93	43.902
ENSNBRG00000003000	-	73	49.425	ENSNBRG00000007602	-	83	49.425
ENSNBRG00000003000	-	82	51.220	ENSNBRG00000016577	si:dkey-182i3.9	93	51.220
ENSNBRG00000003000	-	87	45.556	ENSNBRG00000020159	znf526	89	34.524
ENSNBRG00000003000	-	81	47.297	ENSNBRG00000016666	-	97	53.125
ENSNBRG00000003000	-	80	37.405	ENSNBRG00000012376	-	98	37.405
ENSNBRG00000003000	-	75	46.369	ENSNBRG00000021355	-	85	46.369
ENSNBRG00000003000	-	74	42.169	ENSNBRG00000011785	snai2	96	42.169
ENSNBRG00000003000	-	82	50.000	ENSNBRG00000007384	-	53	50.000
ENSNBRG00000003000	-	83	40.171	ENSNBRG00000001834	-	97	40.171
ENSNBRG00000003000	-	82	56.989	ENSNBRG00000001163	-	95	56.989
ENSNBRG00000003000	-	85	44.523	ENSNBRG00000004557	-	89	44.523
ENSNBRG00000003000	-	81	41.040	ENSNBRG00000018718	zbtb47b	67	41.040
ENSNBRG00000003000	-	88	53.788	ENSNBRG00000014088	-	95	52.027
ENSNBRG00000003000	-	86	45.946	ENSNBRG00000016582	-	84	45.946
ENSNBRG00000003000	-	80	56.322	ENSNBRG00000016219	-	85	56.322
ENSNBRG00000003000	-	80	43.382	ENSNBRG00000021998	-	54	43.382
ENSNBRG00000003000	-	80	52.809	ENSNBRG00000006757	-	76	49.180
ENSNBRG00000003000	-	82	41.781	ENSNBRG00000024293	-	85	41.781
ENSNBRG00000003000	-	81	48.980	ENSNBRG00000024086	-	58	47.692
ENSNBRG00000003000	-	82	47.748	ENSNBRG00000005849	-	92	45.327
ENSNBRG00000003000	-	80	43.750	ENSNBRG00000024294	-	74	43.750

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003000	-	84	52.023	ENSAPOG00000008802	-	99	50.000	Acanthochromis_polyacanthus
ENSNBRG00000003000	-	80	53.061	ENSAPOG00000006303	-	89	48.846	Acanthochromis_polyacanthus
ENSNBRG00000003000	-	82	48.387	ENSAPOG00000019960	-	92	41.611	Acanthochromis_polyacanthus
ENSNBRG00000003000	-	82	49.367	ENSACIG00000022658	-	92	45.522	Amphilophus_citrinellus
ENSNBRG00000003000	-	85	52.486	ENSACIG00000004745	-	90	45.205	Amphilophus_citrinellus
ENSNBRG00000003000	-	93	51.667	ENSAOCG00000013130	-	78	51.667	Amphiprion_ocellaris
ENSNBRG00000003000	-	80	48.077	ENSAOCG00000013710	-	92	47.872	Amphiprion_ocellaris
ENSNBRG00000003000	-	87	45.517	ENSAOCG00000014165	-	81	49.342	Amphiprion_ocellaris
ENSNBRG00000003000	-	93	51.667	ENSAPEG00000009383	-	80	53.191	Amphiprion_percula
ENSNBRG00000003000	-	81	51.685	ENSAPEG00000006650	-	89	48.043	Amphiprion_percula
ENSNBRG00000003000	-	80	52.797	ENSATEG00000017618	-	93	52.797	Anabas_testudineus
ENSNBRG00000003000	-	80	52.797	ENSATEG00000015695	-	93	52.797	Anabas_testudineus
ENSNBRG00000003000	-	80	50.000	ENSACLG00000018746	-	88	47.429	Astatotilapia_calliptera
ENSNBRG00000003000	-	82	54.000	ENSACLG00000026703	-	77	54.000	Astatotilapia_calliptera
ENSNBRG00000003000	-	82	41.696	ENSACLG00000019291	-	88	41.696	Astatotilapia_calliptera
ENSNBRG00000003000	-	82	57.241	ENSACLG00000021343	-	93	57.241	Astatotilapia_calliptera
ENSNBRG00000003000	-	80	55.140	ENSACLG00000023513	-	81	55.140	Astatotilapia_calliptera
ENSNBRG00000003000	-	84	53.521	ENSAMXG00000035920	-	95	48.828	Astyanax_mexicanus
ENSNBRG00000003000	-	80	46.154	ENSAMXG00000039408	-	91	46.154	Astyanax_mexicanus
ENSNBRG00000003000	-	81	53.600	ENSAMXG00000042275	-	94	53.600	Astyanax_mexicanus
ENSNBRG00000003000	-	80	59.184	ENSAMXG00000043302	-	74	59.184	Astyanax_mexicanus
ENSNBRG00000003000	-	80	51.154	ENSAMXG00000041975	-	80	51.154	Astyanax_mexicanus
ENSNBRG00000003000	-	84	49.112	ENSBTAG00000016191	ZNF32	71	49.112	Bos_taurus
ENSNBRG00000003000	-	84	49.112	ENSCHIG00000021099	ZNF32	71	49.112	Capra_hircus
ENSNBRG00000003000	-	80	42.500	ENSCSAVG00000001808	-	100	42.500	Ciona_savignyi
ENSNBRG00000003000	-	82	47.692	ENSCVAG00000021225	-	95	52.273	Cyprinodon_variegatus
ENSNBRG00000003000	-	81	47.012	ENSDARG00000099986	si:ch211-207i20.2	61	47.012	Danio_rerio
ENSNBRG00000003000	-	84	49.112	ENSDNOG00000035046	ZNF32	71	49.112	Dasypus_novemcinctus
ENSNBRG00000003000	-	84	49.112	ENSEASG00005006910	ZNF32	71	49.112	Equus_asinus_asinus
ENSNBRG00000003000	-	84	49.112	ENSECAG00000023676	ZNF32	71	49.112	Equus_caballus
ENSNBRG00000003000	-	82	44.037	ENSELUG00000021229	-	83	44.178	Esox_lucius
ENSNBRG00000003000	-	80	53.571	ENSFHEG00000018063	-	89	53.571	Fundulus_heteroclitus
ENSNBRG00000003000	-	80	58.242	ENSFHEG00000000678	-	69	58.242	Fundulus_heteroclitus
ENSNBRG00000003000	-	81	50.847	ENSGAFG00000020499	-	61	50.847	Gambusia_affinis
ENSNBRG00000003000	-	80	43.206	ENSGACG00000010352	si:ch211-207i20.2	62	46.154	Gasterosteus_aculeatus
ENSNBRG00000003000	-	84	41.532	ENSHBUG00000013296	-	97	41.532	Haplochromis_burtoni
ENSNBRG00000003000	-	86	51.572	ENSHBUG00000021003	-	98	51.572	Haplochromis_burtoni
ENSNBRG00000003000	-	82	47.458	ENSHBUG00000015166	-	88	44.755	Haplochromis_burtoni
ENSNBRG00000003000	-	80	60.000	ENSIPUG00000023761	-	68	60.000	Ictalurus_punctatus
ENSNBRG00000003000	-	82	51.316	ENSIPUG00000002655	-	97	50.000	Ictalurus_punctatus
ENSNBRG00000003000	-	80	45.926	ENSIPUG00000021998	-	91	45.926	Ictalurus_punctatus
ENSNBRG00000003000	-	83	50.000	ENSIPUG00000022741	-	85	49.291	Ictalurus_punctatus
ENSNBRG00000003000	-	82	52.756	ENSIPUG00000005733	-	71	52.756	Ictalurus_punctatus
ENSNBRG00000003000	-	91	46.875	ENSLBEG00000020128	-	97	49.083	Labrus_bergylta
ENSNBRG00000003000	-	82	48.966	ENSMAMG00000014734	-	61	48.966	Mastacembelus_armatus
ENSNBRG00000003000	-	83	43.820	ENSMZEG00005020156	-	80	43.836	Maylandia_zebra
ENSNBRG00000003000	-	86	45.118	ENSMZEG00005007262	-	99	48.454	Maylandia_zebra
ENSNBRG00000003000	-	82	45.349	ENSMZEG00005012715	-	73	45.349	Maylandia_zebra
ENSNBRG00000003000	-	82	42.254	ENSMZEG00005020162	-	73	42.194	Maylandia_zebra
ENSNBRG00000003000	-	82	46.053	ENSMZEG00005003336	-	82	46.053	Maylandia_zebra
ENSNBRG00000003000	-	79	51.460	ENSMZEG00005021052	-	74	51.460	Maylandia_zebra
ENSNBRG00000003000	-	81	41.754	ENSMZEG00005014592	-	90	44.330	Maylandia_zebra
ENSNBRG00000003000	-	79	50.968	ENSMZEG00005025343	-	78	50.968	Maylandia_zebra
ENSNBRG00000003000	-	80	50.588	ENSMZEG00005026082	-	72	50.649	Maylandia_zebra
ENSNBRG00000003000	-	80	50.376	ENSMZEG00005019918	-	87	50.251	Maylandia_zebra
ENSNBRG00000003000	-	80	43.071	ENSMMOG00000006131	-	88	41.544	Mola_mola
ENSNBRG00000003000	-	80	54.054	ENSMMOG00000004460	-	92	53.571	Mola_mola
ENSNBRG00000003000	-	80	51.493	ENSMMOG00000010703	-	96	44.000	Mola_mola
ENSNBRG00000003000	-	82	50.000	ENSMALG00000007051	-	95	50.459	Monopterus_albus
ENSNBRG00000003000	-	94	38.720	ENSMALG00000015655	-	99	46.309	Monopterus_albus
ENSNBRG00000003000	-	80	46.154	ENSMALG00000004216	-	65	46.154	Monopterus_albus
ENSNBRG00000003000	-	84	49.112	MGP_PahariEiJ_G0022533	Zfp637	71	49.112	Mus_pahari
ENSNBRG00000003000	-	84	49.112	MGP_SPRETEiJ_G0029809	Zfp637	71	49.112	Mus_spretus
ENSNBRG00000003000	-	84	49.112	ENSNGAG00000020281	Zfp637	71	49.112	Nannospalax_galili
ENSNBRG00000003000	-	80	47.093	ENSONIG00000005693	-	91	47.093	Oreochromis_niloticus
ENSNBRG00000003000	-	81	47.287	ENSONIG00000015514	-	87	47.287	Oreochromis_niloticus
ENSNBRG00000003000	-	82	44.330	ENSONIG00000015552	-	93	44.330	Oreochromis_niloticus
ENSNBRG00000003000	-	84	49.112	ENSOARG00000002999	ZNF32	71	49.112	Ovis_aries
ENSNBRG00000003000	-	79	42.688	ENSPLAG00000015973	-	100	42.688	Poecilia_latipinna
ENSNBRG00000003000	-	86	47.134	ENSPMEG00000006726	-	89	47.977	Poecilia_mexicana
ENSNBRG00000003000	-	85	44.643	ENSPMEG00000016458	-	93	43.509	Poecilia_mexicana
ENSNBRG00000003000	-	86	56.522	ENSPREG00000010437	-	82	56.522	Poecilia_reticulata
ENSNBRG00000003000	-	81	47.917	ENSPCAG00000005270	-	98	50.206	Procavia_capensis
ENSNBRG00000003000	-	81	50.699	ENSPVAG00000009430	-	79	50.699	Pteropus_vampyrus
ENSNBRG00000003000	-	91	50.495	ENSPNYG00000002684	-	89	50.495	Pundamilia_nyererei
ENSNBRG00000003000	-	81	47.619	ENSPNYG00000007597	-	83	49.315	Pundamilia_nyererei
ENSNBRG00000003000	-	82	50.538	ENSPNAG00000029997	-	99	45.926	Pygocentrus_nattereri
ENSNBRG00000003000	-	85	49.708	ENSSFOG00015015878	-	92	46.784	Scleropages_formosus
ENSNBRG00000003000	-	93	44.554	ENSSDUG00000015159	-	81	44.000	Seriola_dumerili
ENSNBRG00000003000	-	80	50.187	ENSSDUG00000015182	-	73	50.187	Seriola_dumerili
ENSNBRG00000003000	-	80	49.645	ENSSDUG00000015254	-	91	49.645	Seriola_dumerili
ENSNBRG00000003000	-	81	52.308	ENSSDUG00000008943	-	92	55.263	Seriola_dumerili
ENSNBRG00000003000	-	81	50.000	ENSSLDG00000012036	-	98	48.000	Seriola_lalandi_dorsalis
ENSNBRG00000003000	-	80	49.580	ENSSLDG00000018273	-	89	49.580	Seriola_lalandi_dorsalis
ENSNBRG00000003000	-	80	55.435	ENSSLDG00000020675	-	96	52.308	Seriola_lalandi_dorsalis
ENSNBRG00000003000	-	80	50.968	ENSSARG00000000532	-	85	45.946	Sorex_araneus
ENSNBRG00000003000	-	85	46.931	ENSXCOG00000008116	-	99	48.375	Xiphophorus_couchianus