EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSNBRG00000003068 (Gene tree)
Gene ID
102792184
Gene Symbol
-
Alias
-
Full Name
polyadenylate-binding protein 1-like
Gene Type
protein_coding
Species
Neolamprologus_brichardi
Status
putative
Strand
Minus strand
Length
6349 bases
Position
chrJH422314.1:2930177-2936525
Accession
102792184
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSNBRP00000003910PABPPF00658.184.4e-3211
ENSNBRP00000003896PABPPF00658.186.4e-3211
ENSNBRP00000003868PABPPF00658.183.1e-2911
ENSNBRP00000003910RRM_5PF13893.61.9e-0812
ENSNBRP00000003910RRM_5PF13893.61.9e-0822
ENSNBRP00000003868RRM_5PF13893.63e-0812
ENSNBRP00000003868RRM_5PF13893.63e-0822
ENSNBRP00000003896RRM_5PF13893.63.5e-0812
ENSNBRP00000003896RRM_5PF13893.63.5e-0822
ENSNBRP00000003868RRM_1PF00076.221.6e-9314
ENSNBRP00000003868RRM_1PF00076.221.6e-9324
ENSNBRP00000003868RRM_1PF00076.221.6e-9334
ENSNBRP00000003868RRM_1PF00076.221.6e-9344
ENSNBRP00000003896RRM_1PF00076.221.9e-9314
ENSNBRP00000003896RRM_1PF00076.221.9e-9324
ENSNBRP00000003896RRM_1PF00076.221.9e-9334
ENSNBRP00000003896RRM_1PF00076.221.9e-9344
ENSNBRP00000003910RRM_1PF00076.224.8e-8714
ENSNBRP00000003910RRM_1PF00076.224.8e-8724
ENSNBRP00000003910RRM_1PF00076.224.8e-8734
ENSNBRP00000003910RRM_1PF00076.224.8e-8744
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSNBRT00000004026-3755XM_006795981ENSNBRP00000003896635 (aa)XP_006796044UPI0003EC171F
ENSNBRT00000004040-1554-ENSNBRP00000003910517 (aa)--
ENSNBRT00000003998-4008-ENSNBRP00000003868613 (aa)--
Gene Model
Click here to download ENSNBRG00000003068's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003068's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSNBRG00000003068-6837.349ENSNBRG00000010319elavl38937.349
ENSNBRG00000003068-6777.976ENSNBRG00000010047-7277.976
ENSNBRG00000003068-5737.349ENSNBRG00000010284ELAVL28937.349
ENSNBRG00000003068-6533.088ENSNBRG00000001232ncl7432.353
ENSNBRG00000003068-5934.884ENSNBRG00000012818-5934.091
ENSNBRG00000003068-10093.750ENSNBRG00000013737pabpc1b9993.750
ENSNBRG00000003068-7039.759ENSNBRG00000011418celf5a7637.634
ENSNBRG00000003068-9975.708ENSNBRG00000016633pabpc1l9976.228
ENSNBRG00000003068-6533.088ENSNBRG00000000146-8032.353
ENSNBRG00000003068-5336.047ENSNBRG00000000322-5336.047
ENSNBRG00000003068-6833.684ENSNBRG00000017934rbms2b6333.684
ENSNBRG00000003068-6436.145ENSNBRG00000023764-10036.145
ENSNBRG00000003068-6737.333ENSNBRG00000005913rbm197637.333
ENSNBRG00000003068-6990.625ENSNBRG00000009708pabpc49890.865
ENSNBRG00000003068-6831.579ENSNBRG00000015151RBMS15731.579
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSNBRG00000003068-6878.889ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSNBRG00000003068-6878.889ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSNBRG00000003068-10098.268ENSAPOG00000015105pabpc1a10098.268Acanthochromis_polyacanthus
ENSNBRG00000003068-10094.005ENSAPOG00000017776pabpc1b10090.282Acanthochromis_polyacanthus
ENSNBRG00000003068-6878.889ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSNBRG00000003068-10099.055ENSACIG00000004685pabpc1a10099.055Amphilophus_citrinellus
ENSNBRG00000003068-10093.285ENSACIG00000018366pabpc1b10086.698Amphilophus_citrinellus
ENSNBRG00000003068-10098.110ENSAOCG00000011656pabpc1a10098.110Amphiprion_ocellaris
ENSNBRG00000003068-10090.618ENSAOCG00000019839pabpc1b10090.439Amphiprion_ocellaris
ENSNBRG00000003068-10090.618ENSAPEG00000010435pabpc1b10090.439Amphiprion_percula
ENSNBRG00000003068-10098.110ENSAPEG00000006963pabpc1a10098.110Amphiprion_percula
ENSNBRG00000003068-10090.596ENSATEG00000012917pabpc1b10089.671Anabas_testudineus
ENSNBRG00000003068-10097.480ENSATEG00000024852pabpc1a10097.480Anabas_testudineus
ENSNBRG00000003068-6878.889ENSANAG00000019429-9880.102Aotus_nancymaae
ENSNBRG00000003068-6878.889ENSANAG00000019431-9880.102Aotus_nancymaae
ENSNBRG00000003068-10093.510ENSACLG00000014335pabpc1b9993.510Astatotilapia_calliptera
ENSNBRG00000003068-100100.000ENSACLG00000009399pabpc1a100100.000Astatotilapia_calliptera
ENSNBRG00000003068-10091.972ENSAMXG00000008599pabpc1b9991.972Astyanax_mexicanus
ENSNBRG00000003068-6878.889ENSBTAG00000050902-9879.024Bos_taurus
ENSNBRG00000003068-6878.889ENSBTAG00000052491-9778.889Bos_taurus
ENSNBRG00000003068-6878.889ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSNBRG00000003068-6878.889ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSNBRG00000003068-6878.889ENSCHIG00000011138-9880.102Capra_hircus
ENSNBRG00000003068-6878.889ENSCHIG00000006283-9880.102Capra_hircus
ENSNBRG00000003068-6878.889ENSTSYG00000001775-9880.102Carlito_syrichta
ENSNBRG00000003068-6878.889ENSCPOG00000009525-9880.102Cavia_porcellus
ENSNBRG00000003068-6878.889ENSCCAG00000031524-9880.102Cebus_capucinus
ENSNBRG00000003068-6878.889ENSCATG00000042826-9880.102Cercocebus_atys
ENSNBRG00000003068-6878.889ENSCATG00000043125-9880.102Cercocebus_atys
ENSNBRG00000003068-6876.667ENSCLAG00000017412-9878.061Chinchilla_lanigera
ENSNBRG00000003068-6876.667ENSCLAG00000017409-9878.061Chinchilla_lanigera
ENSNBRG00000003068-6878.889ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSNBRG00000003068-6879.641ENSCGRG00001023387-9677.436Cricetulus_griseus_chok1gshd
ENSNBRG00000003068-9999.279ENSCSEG00000013324pabpc1a9999.279Cynoglossus_semilaevis
ENSNBRG00000003068-10091.743ENSCSEG00000015241-10089.028Cynoglossus_semilaevis
ENSNBRG00000003068-10097.480ENSCVAG00000021872pabpc1a10097.480Cyprinodon_variegatus
ENSNBRG00000003068-10089.474ENSCVAG00000005489pabpc1b9989.474Cyprinodon_variegatus
ENSNBRG00000003068-10096.154ENSDARG00000017219pabpc1a10091.693Danio_rerio
ENSNBRG00000003068-10090.596ENSDARG00000021140pabpc1b9992.199Danio_rerio
ENSNBRG00000003068-6879.191ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSNBRG00000003068-6876.111ENSDORG00000011362-9877.551Dipodomys_ordii
ENSNBRG00000003068-6878.889ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSNBRG00000003068-6878.889ENSECAG00000002620-9878.641Equus_caballus
ENSNBRG00000003068-6875.000ENSEEUG00000008203-9876.020Erinaceus_europaeus
ENSNBRG00000003068-9993.944ENSELUG00000003614pabpc1a10093.868Esox_lucius
ENSNBRG00000003068-6858.937ENSELUG00000005389-9758.621Esox_lucius
ENSNBRG00000003068-10091.156ENSELUG00000015062-9991.156Esox_lucius
ENSNBRG00000003068-6878.889ENSFCAG00000039701-9880.102Felis_catus
ENSNBRG00000003068-6878.889ENSFDAG00000005484-9880.102Fukomys_damarensis
ENSNBRG00000003068-10097.638ENSFHEG00000018979pabpc1a10097.638Fundulus_heteroclitus
ENSNBRG00000003068-10092.661ENSFHEG00000008186pabpc1b9991.076Fundulus_heteroclitus
ENSNBRG00000003068-9494.241ENSGMOG00000002448-10080.775Gadus_morhua
ENSNBRG00000003068-9994.725ENSGMOG00000013448pabpc1a9994.725Gadus_morhua
ENSNBRG00000003068-10097.165ENSGAFG00000019750pabpc1a10097.165Gambusia_affinis
ENSNBRG00000003068-10091.136ENSGAFG00000010193pabpc1b9991.304Gambusia_affinis
ENSNBRG00000003068-10097.323ENSGACG00000003572pabpc1a10097.323Gasterosteus_aculeatus
ENSNBRG00000003068-10089.474ENSGACG00000003771pabpc1b9989.474Gasterosteus_aculeatus
ENSNBRG00000003068-6878.889ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSNBRG00000003068-6878.889ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSNBRG00000003068-10093.510ENSHBUG00000002075pabpc1b9993.510Haplochromis_burtoni
ENSNBRG00000003068-100100.000ENSHBUG00000020487pabpc1a100100.000Haplochromis_burtoni
ENSNBRG00000003068-6877.778ENSHGLG00000019668-9879.082Heterocephalus_glaber_female
ENSNBRG00000003068-6877.778ENSHGLG00000019762-9879.082Heterocephalus_glaber_female
ENSNBRG00000003068-6877.778ENSHGLG00100020854-9879.082Heterocephalus_glaber_male
ENSNBRG00000003068-9387.500ENSHCOG00000003175pabpc1b9977.087Hippocampus_comes
ENSNBRG00000003068-10097.638ENSHCOG00000013502pabpc1a10097.638Hippocampus_comes
ENSNBRG00000003068-7064.641ENSIPUG00000021244-5564.641Ictalurus_punctatus
ENSNBRG00000003068-10096.386ENSIPUG00000008848pabpc1a9996.386Ictalurus_punctatus
ENSNBRG00000003068-10084.458ENSIPUG00000010791-10084.458Ictalurus_punctatus
ENSNBRG00000003068-8058.209ENSIPUG00000018724-7658.209Ictalurus_punctatus
ENSNBRG00000003068-6878.333ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSNBRG00000003068-6878.333ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSNBRG00000003068-6877.222ENSJJAG00000007037-9878.571Jaculus_jaculus
ENSNBRG00000003068-10091.364ENSKMAG00000008049pabpc1b9991.364Kryptolebias_marmoratus
ENSNBRG00000003068-10097.480ENSKMAG00000000605pabpc1a10097.480Kryptolebias_marmoratus
ENSNBRG00000003068-10097.323ENSLBEG00000024002-10097.323Labrus_bergylta
ENSNBRG00000003068-10093.285ENSLBEG00000026845pabpc1b9993.285Labrus_bergylta
ENSNBRG00000003068-6877.778ENSLAFG00000023096-9878.974Loxodonta_africana
ENSNBRG00000003068-6878.453ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSNBRG00000003068-6878.889ENSMMUG00000037681-9880.102Macaca_mulatta
ENSNBRG00000003068-6878.889ENSMMUG00000009740-9880.102Macaca_mulatta
ENSNBRG00000003068-6878.889ENSMMUG00000039929-9880.102Macaca_mulatta
ENSNBRG00000003068-6878.889ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSNBRG00000003068-6878.889ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSNBRG00000003068-9998.798ENSMAMG00000004502-10098.798Mastacembelus_armatus
ENSNBRG00000003068-10094.484ENSMAMG00000014610pabpc1b9991.136Mastacembelus_armatus
ENSNBRG00000003068-100100.000ENSMZEG00005025416pabpc1a100100.000Maylandia_zebra
ENSNBRG00000003068-10093.510ENSMZEG00005026745pabpc1b9993.510Maylandia_zebra
ENSNBRG00000003068-6878.889ENSMICG00000047642-9880.102Microcebus_murinus
ENSNBRG00000003068-10098.066ENSMMOG00000018044pabpc1a10098.077Mola_mola
ENSNBRG00000003068-10085.086ENSMMOG00000018009pabpc1b10085.086Mola_mola
ENSNBRG00000003068-9872.406ENSMODG00000015024-9872.406Monodelphis_domestica
ENSNBRG00000003068-9881.053ENSMODG00000013156-9879.335Monodelphis_domestica
ENSNBRG00000003068-10099.279ENSMALG00000013020-9999.279Monopterus_albus
ENSNBRG00000003068-10087.478ENSMALG00000006066pabpc1b9987.478Monopterus_albus
ENSNBRG00000003068-6880.838ENSNGAG00000012688-9878.571Nannospalax_galili
ENSNBRG00000003068-6878.889ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSNBRG00000003068-6878.333ENSODEG00000018540-9879.592Octodon_degus
ENSNBRG00000003068-10099.760ENSONIG00000006871-10099.213Oreochromis_niloticus
ENSNBRG00000003068-10093.269ENSONIG00000002717pabpc1b9993.269Oreochromis_niloticus
ENSNBRG00000003068-6878.889ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSNBRG00000003068-10099.010ENSORLG00000002691pabpc1a10098.571Oryzias_latipes
ENSNBRG00000003068-10089.663ENSORLG00000003008-9889.663Oryzias_latipes
ENSNBRG00000003068-9990.196ENSORLG00020022259-9989.423Oryzias_latipes_hni
ENSNBRG00000003068-10099.010ENSORLG00020022398pabpc1a10096.378Oryzias_latipes_hni
ENSNBRG00000003068-10089.663ENSORLG00015010932-9989.663Oryzias_latipes_hsok
ENSNBRG00000003068-10099.010ENSORLG00015013633pabpc110096.220Oryzias_latipes_hsok
ENSNBRG00000003068-10099.010ENSOMEG00000020219pabpc1a10097.008Oryzias_melastigma
ENSNBRG00000003068-10084.586ENSOMEG00000013627pabpc1b10084.586Oryzias_melastigma
ENSNBRG00000003068-6878.889ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSNBRG00000003068-6878.889ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSNBRG00000003068-6878.889ENSOARG00000005943-9880.102Ovis_aries
ENSNBRG00000003068-6878.889ENSPPAG00000012920-9880.102Pan_paniscus
ENSNBRG00000003068-6878.889ENSPPRG00000011804-9880.102Panthera_pardus
ENSNBRG00000003068-6878.889ENSPPRG00000011809-9880.102Panthera_pardus
ENSNBRG00000003068-6878.889ENSPTRG00000028252-9880.102Pan_troglodytes
ENSNBRG00000003068-6878.889ENSPANG00000011549-9880.102Papio_anubis
ENSNBRG00000003068-10091.284ENSPKIG00000005676pabpc1b10090.596Paramormyrops_kingsleyae
ENSNBRG00000003068-8092.308ENSPMGG00000023134-9792.377Periophthalmus_magnuspinnatus
ENSNBRG00000003068-8098.077ENSPMGG00000022487pabpc1a9298.202Periophthalmus_magnuspinnatus
ENSNBRG00000003068-9976.606ENSPCIG00000016995-5576.606Phascolarctos_cinereus
ENSNBRG00000003068-10096.101ENSPFOG00000010815pabpc1a10095.981Poecilia_formosa
ENSNBRG00000003068-10094.231ENSPFOG00000005917pabpc1b9991.136Poecilia_formosa
ENSNBRG00000003068-10097.953ENSPLAG00000004114pabpc1a10097.953Poecilia_latipinna
ENSNBRG00000003068-10091.364ENSPLAG00000001388pabpc1b9991.533Poecilia_latipinna
ENSNBRG00000003068-10094.231ENSPMEG00000014399pabpc1b9991.136Poecilia_mexicana
ENSNBRG00000003068-10097.953ENSPMEG00000001334pabpc1a10097.953Poecilia_mexicana
ENSNBRG00000003068-10091.364ENSPREG00000010911pabpc1b9991.533Poecilia_reticulata
ENSNBRG00000003068-10099.420ENSPREG00000019595pabpc1a10099.519Poecilia_reticulata
ENSNBRG00000003068-6878.889ENSPPYG00000020468-9880.102Pongo_abelii
ENSNBRG00000003068-6878.889ENSPCAG00000005308-9880.102Procavia_capensis
ENSNBRG00000003068-6878.333ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSNBRG00000003068-6879.330ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSNBRG00000003068-100100.000ENSPNYG00000005192pabpc1a10099.843Pundamilia_nyererei
ENSNBRG00000003068-10093.510ENSPNYG00000012578pabpc1b9993.510Pundamilia_nyererei
ENSNBRG00000003068-10091.514ENSPNAG00000024626pabpc1b9991.344Pygocentrus_nattereri
ENSNBRG00000003068-10095.904ENSPNAG00000028408pabpc1a9995.904Pygocentrus_nattereri
ENSNBRG00000003068-6878.889ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSNBRG00000003068-9989.671ENSRBIG00000028738-9589.671Rhinopithecus_bieti
ENSNBRG00000003068-6878.889ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSNBRG00000003068-9768.282ENSSHAG00000000511-10068.282Sarcophilus_harrisii
ENSNBRG00000003068-10091.116ENSSFOG00015006662pabpc1a9991.116Scleropages_formosus
ENSNBRG00000003068-7877.070ENSSFOG00015019668-8878.613Scleropages_formosus
ENSNBRG00000003068-10094.712ENSSFOG00015002752-9994.712Scleropages_formosus
ENSNBRG00000003068-10089.028ENSSMAG00000006869pabpc1b10089.185Scophthalmus_maximus
ENSNBRG00000003068-10099.010ENSSMAG00000010803pabpc1a10097.638Scophthalmus_maximus
ENSNBRG00000003068-10097.480ENSSDUG00000006675pabpc1a10097.480Seriola_dumerili
ENSNBRG00000003068-10096.078ENSSDUG00000011965pabpc1b9991.304Seriola_dumerili
ENSNBRG00000003068-10097.480ENSSLDG00000011661pabpc1a10097.480Seriola_lalandi_dorsalis
ENSNBRG00000003068-10090.271ENSSLDG00000014156pabpc1b10090.358Seriola_lalandi_dorsalis
ENSNBRG00000003068-10091.304ENSSPAG00000019265pabpc1b10091.066Stegastes_partitus
ENSNBRG00000003068-10098.425ENSSPAG00000014453-10098.425Stegastes_partitus
ENSNBRG00000003068-6878.889ENSSSCG00000032167-9880.102Sus_scrofa
ENSNBRG00000003068-6878.889ENSSSCG00000036336-9880.102Sus_scrofa
ENSNBRG00000003068-10092.806ENSTRUG00000003767-9990.951Takifugu_rubripes
ENSNBRG00000003068-10095.413ENSTRUG00000011577-10095.283Takifugu_rubripes
ENSNBRG00000003068-10088.341ENSTNIG00000009153pabpc1b10086.604Tetraodon_nigroviridis
ENSNBRG00000003068-9997.590ENSTNIG00000013307pabpc1a10092.248Tetraodon_nigroviridis
ENSNBRG00000003068-6878.889ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSNBRG00000003068-6878.889ENSUAMG00000008089-9880.102Ursus_americanus
ENSNBRG00000003068-9762.642ENSUMAG00000023926-8969.890Ursus_maritimus
ENSNBRG00000003068-6878.889ENSUMAG00000003364-9880.102Ursus_maritimus
ENSNBRG00000003068-6878.333ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSNBRG00000003068-9845.564ENSXETG00000015439-9745.161Xenopus_tropicalis
ENSNBRG00000003068-10085.737ENSXCOG00000019901pabpc1b10085.580Xiphophorus_couchianus
ENSNBRG00000003068-10091.811ENSXCOG00000017066pabpc1a10091.811Xiphophorus_couchianus
ENSNBRG00000003068-10091.364ENSXMAG00000003753pabpc1b9991.533Xiphophorus_maculatus
ENSNBRG00000003068-10097.323ENSXMAG00000002555pabpc1a10097.323Xiphophorus_maculatus

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