EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003095 (Gene tree)
Gene ID: 102779153
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: protein CMSS1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 30125 bases
Position: chrJH422286.1:2182907-2213031
Accession: 102779153
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003860	CMS1	PF14617.6	1e-33	1	1
ENSNBRP00000003860	DEAD	PF00270.29	4.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000003990	-	932	XM_006788211	ENSNBRP00000003860	291 (aa)	XP_006788274	UPI0003EC42D3

Gene Model

Click here to download ENSNBRG00000003095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003095	cmss1	100	49.828	ENSG00000184220	CMSS1	98	58.750	Homo_sapiens
ENSNBRG00000003095	cmss1	70	86.207	ENSAPOG00000010604	cmss1	96	73.563	Acanthochromis_polyacanthus
ENSNBRG00000003095	cmss1	83	55.967	ENSAMEG00000004092	CMSS1	78	60.591	Ailuropoda_melanoleuca
ENSNBRG00000003095	cmss1	90	83.969	ENSACIG00000021854	cmss1	98	84.231	Amphilophus_citrinellus
ENSNBRG00000003095	cmss1	100	78.694	ENSAOCG00000013361	cmss1	100	79.038	Amphiprion_ocellaris
ENSNBRG00000003095	cmss1	100	80.069	ENSAPEG00000005829	cmss1	100	79.381	Amphiprion_percula
ENSNBRG00000003095	cmss1	100	76.632	ENSATEG00000008209	cmss1	100	76.792	Anabas_testudineus
ENSNBRG00000003095	cmss1	69	63.366	ENSAPLG00000010542	CMSS1	88	63.366	Anas_platyrhynchos
ENSNBRG00000003095	cmss1	84	58.537	ENSACAG00000011065	CMSS1	74	64.356	Anolis_carolinensis
ENSNBRG00000003095	cmss1	100	49.141	ENSANAG00000023565	CMSS1	100	48.475	Aotus_nancymaae
ENSNBRG00000003095	cmss1	100	99.313	ENSACLG00000027294	cmss1	100	99.313	Astatotilapia_calliptera
ENSNBRG00000003095	cmss1	100	59.524	ENSAMXG00000002046	cmss1	100	59.524	Astyanax_mexicanus
ENSNBRG00000003095	cmss1	100	49.828	ENSBTAG00000013663	CMSS1	100	48.344	Bos_taurus
ENSNBRG00000003095	cmss1	100	51.027	ENSCJAG00000000610	CMSS1	100	48.845	Callithrix_jacchus
ENSNBRG00000003095	cmss1	83	56.198	ENSCAFG00000009230	CMSS1	73	61.386	Canis_familiaris
ENSNBRG00000003095	cmss1	65	62.963	ENSCAFG00020024156	-	59	62.963	Canis_lupus_dingo
ENSNBRG00000003095	cmss1	83	56.198	ENSCAFG00020009464	-	74	61.386	Canis_lupus_dingo
ENSNBRG00000003095	cmss1	83	54.959	ENSCHIG00000013003	CMSS1	73	59.901	Capra_hircus
ENSNBRG00000003095	cmss1	83	55.785	ENSTSYG00000009266	CMSS1	78	61.386	Carlito_syrichta
ENSNBRG00000003095	cmss1	64	53.226	ENSCAPG00000013584	CMSS1	87	53.226	Cavia_aperea
ENSNBRG00000003095	cmss1	100	52.234	ENSCPOG00000014680	CMSS1	100	51.701	Cavia_porcellus
ENSNBRG00000003095	cmss1	100	51.203	ENSCCAG00000034685	CMSS1	100	48.845	Cebus_capucinus
ENSNBRG00000003095	cmss1	100	50.329	ENSCATG00000031980	CMSS1	100	48.684	Cercocebus_atys
ENSNBRG00000003095	cmss1	69	60.500	ENSCLAG00000011241	CMSS1	87	60.891	Chinchilla_lanigera
ENSNBRG00000003095	cmss1	69	61.881	ENSCSAG00000006024	CMSS1	82	61.881	Chlorocebus_sabaeus
ENSNBRG00000003095	cmss1	100	38.488	ENSCHOG00000012098	CMSS1	100	36.949	Choloepus_hoffmanni
ENSNBRG00000003095	cmss1	65	44.211	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSNBRG00000003095	cmss1	100	50.000	ENSCANG00000031337	CMSS1	100	48.355	Colobus_angolensis_palliatus
ENSNBRG00000003095	cmss1	100	48.797	ENSCGRG00001014305	Cmss1	100	48.797	Cricetulus_griseus_chok1gshd
ENSNBRG00000003095	cmss1	69	59.406	ENSCGRG00000006722	Cmss1	79	59.406	Cricetulus_griseus_crigri
ENSNBRG00000003095	cmss1	100	70.470	ENSCSEG00000004958	cmss1	100	68.121	Cynoglossus_semilaevis
ENSNBRG00000003095	cmss1	100	74.658	ENSCVAG00000005039	cmss1	100	74.315	Cyprinodon_variegatus
ENSNBRG00000003095	cmss1	100	59.864	ENSDARG00000112579	cmss1	100	59.259	Danio_rerio
ENSNBRG00000003095	cmss1	69	60.396	ENSDNOG00000040418	CMSS1	73	60.396	Dasypus_novemcinctus
ENSNBRG00000003095	cmss1	100	51.890	ENSDORG00000010461	Cmss1	100	50.680	Dipodomys_ordii
ENSNBRG00000003095	cmss1	69	59.500	ENSEASG00005010966	CMSS1	92	59.901	Equus_asinus_asinus
ENSNBRG00000003095	cmss1	83	53.909	ENSECAG00000015662	CMSS1	89	59.406	Equus_caballus
ENSNBRG00000003095	cmss1	69	43.500	ENSEEUG00000007624	-	73	44.059	Erinaceus_europaeus
ENSNBRG00000003095	cmss1	100	60.265	ENSELUG00000019459	cmss1	100	60.066	Esox_lucius
ENSNBRG00000003095	cmss1	100	51.546	ENSFCAG00000044577	CMSS1	100	49.338	Felis_catus
ENSNBRG00000003095	cmss1	69	62.376	ENSFALG00000005816	CMSS1	85	62.376	Ficedula_albicollis
ENSNBRG00000003095	cmss1	69	61.386	ENSFDAG00000012577	CMSS1	89	61.386	Fukomys_damarensis
ENSNBRG00000003095	cmss1	79	78.879	ENSFHEG00000012008	cmss1	94	78.509	Fundulus_heteroclitus
ENSNBRG00000003095	cmss1	99	68.750	ENSGMOG00000016729	cmss1	100	66.667	Gadus_morhua
ENSNBRG00000003095	cmss1	69	64.356	ENSGALG00000015267	CMSS1	77	64.356	Gallus_gallus
ENSNBRG00000003095	cmss1	92	76.952	ENSGAFG00000021217	cmss1	99	75.564	Gambusia_affinis
ENSNBRG00000003095	cmss1	99	72.569	ENSGACG00000002798	cmss1	100	70.139	Gasterosteus_aculeatus
ENSNBRG00000003095	cmss1	84	59.671	ENSGAGG00000019861	CMSS1	79	63.861	Gopherus_agassizii
ENSNBRG00000003095	cmss1	69	61.386	ENSGGOG00000014125	CMSS1	77	61.386	Gorilla_gorilla
ENSNBRG00000003095	cmss1	100	98.282	ENSHBUG00000008431	cmss1	100	98.282	Haplochromis_burtoni
ENSNBRG00000003095	cmss1	69	60.000	ENSHGLG00000019481	CMSS1	82	60.396	Heterocephalus_glaber_female
ENSNBRG00000003095	cmss1	69	60.000	ENSHGLG00100010314	CMSS1	81	60.396	Heterocephalus_glaber_male
ENSNBRG00000003095	cmss1	100	69.595	ENSHCOG00000003222	cmss1	100	69.932	Hippocampus_comes
ENSNBRG00000003095	cmss1	100	62.457	ENSIPUG00000011591	cmss1	100	59.727	Ictalurus_punctatus
ENSNBRG00000003095	cmss1	100	49.662	ENSSTOG00000019366	CMSS1	100	48.495	Ictidomys_tridecemlineatus
ENSNBRG00000003095	cmss1	100	51.020	ENSJJAG00000014894	Cmss1	90	61.881	Jaculus_jaculus
ENSNBRG00000003095	cmss1	92	67.910	ENSKMAG00000002390	cmss1	99	66.038	Kryptolebias_marmoratus
ENSNBRG00000003095	cmss1	91	67.537	ENSLBEG00000006298	cmss1	92	75.221	Labrus_bergylta
ENSNBRG00000003095	cmss1	69	63.366	ENSLACG00000009293	CMSS1	88	63.366	Latimeria_chalumnae
ENSNBRG00000003095	cmss1	100	53.265	ENSLOCG00000009391	cmss1	100	54.983	Lepisosteus_oculatus
ENSNBRG00000003095	cmss1	69	62.000	ENSLAFG00000017509	CMSS1	89	62.376	Loxodonta_africana
ENSNBRG00000003095	cmss1	100	49.671	ENSMFAG00000045006	CMSS1	100	48.355	Macaca_fascicularis
ENSNBRG00000003095	cmss1	100	49.342	ENSMMUG00000002939	CMSS1	100	48.026	Macaca_mulatta
ENSNBRG00000003095	cmss1	100	49.671	ENSMNEG00000031315	CMSS1	100	48.355	Macaca_nemestrina
ENSNBRG00000003095	cmss1	100	49.671	ENSMLEG00000033660	CMSS1	100	48.355	Mandrillus_leucophaeus
ENSNBRG00000003095	cmss1	100	79.381	ENSMAMG00000017176	cmss1	100	79.038	Mastacembelus_armatus
ENSNBRG00000003095	cmss1	100	99.313	ENSMZEG00005021886	cmss1	100	99.313	Maylandia_zebra
ENSNBRG00000003095	cmss1	69	64.356	ENSMGAG00000014360	CMSS1	89	64.356	Meleagris_gallopavo
ENSNBRG00000003095	cmss1	100	37.113	ENSMAUG00000020609	Cmss1	100	36.426	Mesocricetus_auratus
ENSNBRG00000003095	cmss1	100	52.234	ENSMICG00000048977	CMSS1	100	51.020	Microcebus_murinus
ENSNBRG00000003095	cmss1	100	50.338	ENSMOCG00000021937	Cmss1	100	50.171	Microtus_ochrogaster
ENSNBRG00000003095	cmss1	77	74.672	ENSMMOG00000019794	cmss1	97	68.627	Mola_mola
ENSNBRG00000003095	cmss1	82	53.571	ENSMODG00000002275	CMSS1	76	61.386	Monodelphis_domestica
ENSNBRG00000003095	cmss1	100	78.498	ENSMALG00000004250	cmss1	100	78.157	Monopterus_albus
ENSNBRG00000003095	cmss1	100	52.218	MGP_CAROLIEiJ_G0020824	Cmss1	100	51.203	Mus_caroli
ENSNBRG00000003095	cmss1	100	51.536	ENSMUSG00000022748	Cmss1	100	50.515	Mus_musculus
ENSNBRG00000003095	cmss1	100	51.536	MGP_PahariEiJ_G0016524	Cmss1	100	50.512	Mus_pahari
ENSNBRG00000003095	cmss1	100	51.195	MGP_SPRETEiJ_G0021724	Cmss1	100	50.171	Mus_spretus
ENSNBRG00000003095	cmss1	83	56.017	ENSMPUG00000011324	CMSS1	78	61.692	Mustela_putorius_furo
ENSNBRG00000003095	cmss1	69	62.376	ENSMLUG00000001131	CMSS1	78	62.745	Myotis_lucifugus
ENSNBRG00000003095	cmss1	100	50.515	ENSNGAG00000020316	Cmss1	100	50.169	Nannospalax_galili
ENSNBRG00000003095	cmss1	100	50.515	ENSNLEG00000034172	CMSS1	100	49.013	Nomascus_leucogenys
ENSNBRG00000003095	cmss1	79	50.870	ENSMEUG00000014505	CMSS1	89	52.475	Notamacropus_eugenii
ENSNBRG00000003095	cmss1	100	51.027	ENSOPRG00000002986	CMSS1	100	50.171	Ochotona_princeps
ENSNBRG00000003095	cmss1	100	45.051	ENSODEG00000001853	-	100	43.098	Octodon_degus
ENSNBRG00000003095	cmss1	100	51.546	ENSODEG00000005226	-	100	50.505	Octodon_degus
ENSNBRG00000003095	cmss1	100	41.581	ENSODEG00000009446	-	100	41.924	Octodon_degus
ENSNBRG00000003095	cmss1	100	48.797	ENSODEG00000003558	-	100	48.797	Octodon_degus
ENSNBRG00000003095	cmss1	90	97.318	ENSONIG00000006678	cmss1	100	97.318	Oreochromis_niloticus
ENSNBRG00000003095	cmss1	75	60.274	ENSOANG00000007529	CMSS1	87	61.881	Ornithorhynchus_anatinus
ENSNBRG00000003095	cmss1	83	55.785	ENSOCUG00000025366	CMSS1	73	60.891	Oryctolagus_cuniculus
ENSNBRG00000003095	cmss1	100	71.478	ENSORLG00000020340	cmss1	100	71.821	Oryzias_latipes
ENSNBRG00000003095	cmss1	90	62.452	ENSORLG00020012235	cmss1	86	72.906	Oryzias_latipes_hni
ENSNBRG00000003095	cmss1	91	62.921	ENSORLG00015015551	cmss1	76	72.414	Oryzias_latipes_hsok
ENSNBRG00000003095	cmss1	100	73.540	ENSOMEG00000012555	cmss1	100	73.196	Oryzias_melastigma
ENSNBRG00000003095	cmss1	69	60.891	ENSOGAG00000002045	CMSS1	89	60.891	Otolemur_garnettii
ENSNBRG00000003095	cmss1	83	54.733	ENSOARG00000017899	CMSS1	70	59.606	Ovis_aries
ENSNBRG00000003095	cmss1	69	61.386	ENSPPAG00000038515	CMSS1	74	61.386	Pan_paniscus
ENSNBRG00000003095	cmss1	100	51.546	ENSPPRG00000016767	CMSS1	100	49.007	Panthera_pardus
ENSNBRG00000003095	cmss1	100	51.203	ENSPTIG00000018274	CMSS1	100	51.027	Panthera_tigris_altaica
ENSNBRG00000003095	cmss1	100	50.172	ENSPTRG00000015157	CMSS1	100	48.684	Pan_troglodytes
ENSNBRG00000003095	cmss1	69	61.881	ENSPANG00000019980	CMSS1	80	61.881	Papio_anubis
ENSNBRG00000003095	cmss1	96	60.498	ENSPKIG00000012609	cmss1	97	60.150	Paramormyrops_kingsleyae
ENSNBRG00000003095	cmss1	69	65.347	ENSPSIG00000003849	CMSS1	88	65.347	Pelodiscus_sinensis
ENSNBRG00000003095	cmss1	77	71.552	ENSPMGG00000010286	cmss1	88	77.941	Periophthalmus_magnuspinnatus
ENSNBRG00000003095	cmss1	100	50.515	ENSPEMG00000016384	Cmss1	100	50.515	Peromyscus_maniculatus_bairdii
ENSNBRG00000003095	cmss1	70	50.000	ENSPMAG00000001146	cmss1	99	50.246	Petromyzon_marinus
ENSNBRG00000003095	cmss1	83	56.612	ENSPCIG00000015656	CMSS1	77	61.386	Phascolarctos_cinereus
ENSNBRG00000003095	cmss1	100	78.082	ENSPFOG00000016849	cmss1	100	76.027	Poecilia_formosa
ENSNBRG00000003095	cmss1	100	77.740	ENSPLAG00000008323	cmss1	100	75.685	Poecilia_latipinna
ENSNBRG00000003095	cmss1	100	78.082	ENSPMEG00000021020	cmss1	100	76.712	Poecilia_mexicana
ENSNBRG00000003095	cmss1	89	79.693	ENSPREG00000007618	cmss1	90	78.868	Poecilia_reticulata
ENSNBRG00000003095	cmss1	100	49.671	ENSPPYG00000013606	CMSS1	100	48.684	Pongo_abelii
ENSNBRG00000003095	cmss1	100	53.265	ENSPCOG00000020035	CMSS1	100	52.921	Propithecus_coquereli
ENSNBRG00000003095	cmss1	100	43.986	ENSPVAG00000017031	CMSS1	100	42.715	Pteropus_vampyrus
ENSNBRG00000003095	cmss1	91	99.245	ENSPNYG00000013428	cmss1	97	99.245	Pundamilia_nyererei
ENSNBRG00000003095	cmss1	100	60.204	ENSPNAG00000007912	cmss1	100	59.864	Pygocentrus_nattereri
ENSNBRG00000003095	cmss1	69	61.386	ENSRNOG00000027888	Cmss1	79	61.386	Rattus_norvegicus
ENSNBRG00000003095	cmss1	100	49.828	ENSRBIG00000037931	CMSS1	100	48.355	Rhinopithecus_bieti
ENSNBRG00000003095	cmss1	100	49.828	ENSRROG00000042910	CMSS1	100	48.355	Rhinopithecus_roxellana
ENSNBRG00000003095	cmss1	83	55.372	ENSSBOG00000030980	CMSS1	77	60.891	Saimiri_boliviensis_boliviensis
ENSNBRG00000003095	cmss1	69	61.881	ENSSHAG00000009321	CMSS1	80	61.881	Sarcophilus_harrisii
ENSNBRG00000003095	cmss1	100	63.140	ENSSFOG00015001509	cmss1	100	62.838	Scleropages_formosus
ENSNBRG00000003095	cmss1	100	74.658	ENSSMAG00000001653	cmss1	100	74.490	Scophthalmus_maximus
ENSNBRG00000003095	cmss1	100	80.546	ENSSDUG00000007719	cmss1	100	78.498	Seriola_dumerili
ENSNBRG00000003095	cmss1	90	75.000	ENSSLDG00000012300	cmss1	86	80.861	Seriola_lalandi_dorsalis
ENSNBRG00000003095	cmss1	100	43.986	ENSSARG00000003584	CMSS1	100	42.955	Sorex_araneus
ENSNBRG00000003095	cmss1	69	60.891	ENSSPUG00000003865	CMSS1	89	60.891	Sphenodon_punctatus
ENSNBRG00000003095	cmss1	95	76.727	ENSSPAG00000019182	cmss1	79	73.507	Stegastes_partitus
ENSNBRG00000003095	cmss1	100	51.546	ENSSSCG00000011970	CMSS1	100	49.007	Sus_scrofa
ENSNBRG00000003095	cmss1	69	62.871	ENSTGUG00000013635	CMSS1	88	62.871	Taeniopygia_guttata
ENSNBRG00000003095	cmss1	100	70.307	ENSTRUG00000015265	cmss1	100	65.217	Takifugu_rubripes
ENSNBRG00000003095	cmss1	70	72.906	ENSTNIG00000002880	cmss1	89	63.258	Tetraodon_nigroviridis
ENSNBRG00000003095	cmss1	69	42.574	ENSTBEG00000016722	CMSS1	72	42.574	Tupaia_belangeri
ENSNBRG00000003095	cmss1	100	50.515	ENSTTRG00000001562	CMSS1	100	49.492	Tursiops_truncatus
ENSNBRG00000003095	cmss1	83	56.198	ENSUAMG00000024209	CMSS1	91	61.386	Ursus_americanus
ENSNBRG00000003095	cmss1	83	55.785	ENSUMAG00000001983	CMSS1	78	60.891	Ursus_maritimus
ENSNBRG00000003095	cmss1	55	59.375	ENSVPAG00000000263	CMSS1	57	59.375	Vicugna_pacos
ENSNBRG00000003095	cmss1	69	60.396	ENSVVUG00000007776	-	80	60.396	Vulpes_vulpes
ENSNBRG00000003095	cmss1	83	56.612	ENSVVUG00000021647	-	82	61.386	Vulpes_vulpes
ENSNBRG00000003095	cmss1	100	54.296	ENSXETG00000011858	cmss1	100	51.525	Xenopus_tropicalis
ENSNBRG00000003095	cmss1	95	75.000	ENSXCOG00000018724	cmss1	91	75.094	Xiphophorus_couchianus
ENSNBRG00000003095	cmss1	91	75.926	ENSXMAG00000011243	cmss1	99	75.094	Xiphophorus_maculatus