EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003116 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 3816 bases
Position: chrJH422502.1:434816-438631
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003918	PARP	PF00644.20	9.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004048	-	864	-	ENSNBRP00000003918	287 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000003116's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003116's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003116	-	96	63.265	ENSNBRG00000002998	-	100	65.441
ENSNBRG00000003116	-	63	39.086	ENSNBRG00000004017	-	90	39.896
ENSNBRG00000003116	-	57	41.341	ENSNBRG00000004048	-	95	41.341
ENSNBRG00000003116	-	63	37.186	ENSNBRG00000003877	-	68	37.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003116	-	57	61.667	ENSACIG00000008604	-	85	61.667	Amphilophus_citrinellus
ENSNBRG00000003116	-	65	69.652	ENSACIG00000001702	-	90	69.652	Amphilophus_citrinellus
ENSNBRG00000003116	-	97	59.794	ENSAOCG00000020608	-	54	64.249	Amphiprion_ocellaris
ENSNBRG00000003116	-	97	60.410	ENSAPEG00000022069	-	63	60.410	Amphiprion_percula
ENSNBRG00000003116	-	96	61.695	ENSATEG00000012173	-	70	61.695	Anabas_testudineus
ENSNBRG00000003116	-	96	86.644	ENSACLG00000005600	-	86	86.644	Astatotilapia_calliptera
ENSNBRG00000003116	-	96	65.068	ENSACLG00000005627	-	76	65.068	Astatotilapia_calliptera
ENSNBRG00000003116	-	96	52.218	ENSAMXG00000031328	-	72	52.218	Astyanax_mexicanus
ENSNBRG00000003116	-	96	56.655	ENSCSEG00000009834	-	88	56.655	Cynoglossus_semilaevis
ENSNBRG00000003116	-	97	61.111	ENSCVAG00000009352	-	88	60.071	Cyprinodon_variegatus
ENSNBRG00000003116	-	80	54.839	ENSCVAG00000000686	-	99	54.839	Cyprinodon_variegatus
ENSNBRG00000003116	-	83	33.208	ENSDARG00000098398	CABZ01079480.1	52	33.208	Danio_rerio
ENSNBRG00000003116	-	96	56.318	ENSFHEG00000011780	-	98	56.318	Fundulus_heteroclitus
ENSNBRG00000003116	-	95	30.164	ENSGMOG00000011217	-	59	30.164	Gadus_morhua
ENSNBRG00000003116	-	90	61.624	ENSGAFG00000015867	-	100	61.624	Gambusia_affinis
ENSNBRG00000003116	-	96	64.041	ENSHBUG00000015143	-	78	64.041	Haplochromis_burtoni
ENSNBRG00000003116	-	64	70.707	ENSHBUG00000013327	-	53	70.707	Haplochromis_burtoni
ENSNBRG00000003116	-	97	86.007	ENSHBUG00000015159	-	100	86.007	Haplochromis_burtoni
ENSNBRG00000003116	-	96	53.265	ENSIPUG00000019562	-	85	53.455	Ictalurus_punctatus
ENSNBRG00000003116	-	95	31.650	ENSIPUG00000001876	-	60	31.650	Ictalurus_punctatus
ENSNBRG00000003116	-	96	66.894	ENSKMAG00000010882	-	56	66.667	Kryptolebias_marmoratus
ENSNBRG00000003116	-	91	63.309	ENSMAMG00000018261	-	94	63.309	Mastacembelus_armatus
ENSNBRG00000003116	-	96	63.140	ENSMAMG00000018192	-	77	63.140	Mastacembelus_armatus
ENSNBRG00000003116	-	89	65.074	ENSMZEG00005027858	-	100	65.074	Maylandia_zebra
ENSNBRG00000003116	-	96	73.540	ENSMZEG00005027852	-	58	73.540	Maylandia_zebra
ENSNBRG00000003116	-	97	80.612	ENSMZEG00005002038	-	69	80.137	Maylandia_zebra
ENSNBRG00000003116	-	62	60.000	ENSMMOG00000010419	-	56	60.000	Mola_mola
ENSNBRG00000003116	-	96	64.407	ENSMALG00000004165	-	73	64.407	Monopterus_albus
ENSNBRG00000003116	-	96	74.570	ENSONIG00000000241	-	57	74.570	Oreochromis_niloticus
ENSNBRG00000003116	-	97	63.356	ENSORLG00020014046	-	100	63.672	Oryzias_latipes_hni
ENSNBRG00000003116	-	96	60.274	ENSORLG00020014210	-	63	60.274	Oryzias_latipes_hni
ENSNBRG00000003116	-	97	63.356	ENSORLG00015004157	-	100	63.281	Oryzias_latipes_hsok
ENSNBRG00000003116	-	96	61.301	ENSORLG00015004253	-	96	60.811	Oryzias_latipes_hsok
ENSNBRG00000003116	-	89	64.130	ENSOMEG00000009413	-	100	64.130	Oryzias_melastigma
ENSNBRG00000003116	-	97	30.032	ENSPKIG00000004064	-	52	39.459	Paramormyrops_kingsleyae
ENSNBRG00000003116	-	89	55.678	ENSPMGG00000011629	-	95	55.678	Periophthalmus_magnuspinnatus
ENSNBRG00000003116	-	63	63.590	ENSPLAG00000022742	-	52	63.590	Poecilia_latipinna
ENSNBRG00000003116	-	96	60.616	ENSPMEG00000003192	-	87	60.616	Poecilia_mexicana
ENSNBRG00000003116	-	90	61.172	ENSPREG00000017145	-	100	61.172	Poecilia_reticulata
ENSNBRG00000003116	-	93	73.145	ENSPNYG00000023890	-	94	73.145	Pundamilia_nyererei
ENSNBRG00000003116	-	96	74.914	ENSPNYG00000003575	-	87	74.914	Pundamilia_nyererei
ENSNBRG00000003116	-	97	86.007	ENSPNYG00000008208	-	100	86.007	Pundamilia_nyererei
ENSNBRG00000003116	-	89	55.678	ENSPNAG00000026750	-	91	55.678	Pygocentrus_nattereri
ENSNBRG00000003116	-	92	55.872	ENSPNAG00000004111	-	95	55.872	Pygocentrus_nattereri
ENSNBRG00000003116	-	96	31.894	ENSPNAG00000006111	-	61	31.894	Pygocentrus_nattereri
ENSNBRG00000003116	-	89	46.014	ENSPNAG00000005029	-	99	46.014	Pygocentrus_nattereri
ENSNBRG00000003116	-	96	64.164	ENSSMAG00000016922	-	50	65.128	Scophthalmus_maximus
ENSNBRG00000003116	-	92	63.929	ENSSLDG00000011620	-	95	63.929	Seriola_lalandi_dorsalis
ENSNBRG00000003116	-	95	61.888	ENSSPAG00000014708	-	90	61.888	Stegastes_partitus
ENSNBRG00000003116	-	89	50.545	ENSTRUG00000010891	-	100	50.545	Takifugu_rubripes
ENSNBRG00000003116	-	96	49.315	ENSTNIG00000018877	-	58	49.315	Tetraodon_nigroviridis
ENSNBRG00000003116	-	90	61.172	ENSXCOG00000012535	-	100	61.172	Xiphophorus_couchianus
ENSNBRG00000003116	-	96	61.644	ENSXMAG00000015158	-	55	65.128	Xiphophorus_maculatus