EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003126 (Gene tree)
Gene ID: -
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: U1 small nuclear ribonucleoprotein 70 kDa-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 7142 bases
Position: chrJH422477.1:292758-299899
Accession: 102778676
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000003934	RRM_1	PF00076.22	4.5e-20	1	1
ENSNBRP00000003934	U1snRNP70_N	PF12220.8	1e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004066	-	702	XM_006807851	ENSNBRP00000003934	233 (aa)	XP_006807914	-

Gene Model

Click here to download ENSNBRG00000003126's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003126's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003126	snrnp70	96	92.377	ENSG00000104852	SNRNP70	99	89.024	Homo_sapiens
ENSNBRG00000003126	snrnp70	61	92.958	ENSAPOG00000009322	snrnp70	89	92.958	Acanthochromis_polyacanthus
ENSNBRG00000003126	snrnp70	96	88.393	ENSAMEG00000014468	SNRNP70	51	86.607	Ailuropoda_melanoleuca
ENSNBRG00000003126	snrnp70	97	98.673	ENSAOCG00000011672	snrnp70	50	87.892	Amphiprion_ocellaris
ENSNBRG00000003126	snrnp70	97	98.673	ENSATEG00000008748	snrnp70	50	98.673	Anabas_testudineus
ENSNBRG00000003126	snrnp70	93	92.627	ENSACAG00000013276	SNRNP70	51	92.342	Anolis_carolinensis
ENSNBRG00000003126	snrnp70	96	92.377	ENSANAG00000036787	SNRNP70	99	89.024	Aotus_nancymaae
ENSNBRG00000003126	snrnp70	70	89.024	ENSBTAG00000048800	-	99	89.024	Bos_taurus
ENSNBRG00000003126	snrnp70	86	52.970	WBGene00004390	rnp-7	56	51.596	Caenorhabditis_elegans
ENSNBRG00000003126	snrnp70	96	92.377	ENSCJAG00000000193	SNRNP70	99	89.024	Callithrix_jacchus
ENSNBRG00000003126	snrnp70	96	92.377	ENSCAFG00000003711	SNRNP70	99	89.024	Canis_familiaris
ENSNBRG00000003126	snrnp70	96	89.333	ENSCAFG00020025470	SNRNP70	99	84.940	Canis_lupus_dingo
ENSNBRG00000003126	snrnp70	70	89.024	ENSCHIG00000018534	-	99	89.024	Capra_hircus
ENSNBRG00000003126	snrnp70	96	92.377	ENSCPOG00000019589	SNRNP70	51	92.377	Cavia_porcellus
ENSNBRG00000003126	snrnp70	96	92.377	ENSCATG00000016149	SNRNP70	51	92.377	Cercocebus_atys
ENSNBRG00000003126	snrnp70	96	92.377	ENSCLAG00000007991	SNRNP70	51	92.377	Chinchilla_lanigera
ENSNBRG00000003126	snrnp70	93	92.593	ENSCSAG00000002759	SNRNP70	52	92.342	Chlorocebus_sabaeus
ENSNBRG00000003126	snrnp70	93	92.627	ENSCPBG00000014841	SNRNP70	51	92.342	Chrysemys_picta_bellii
ENSNBRG00000003126	snrnp70	95	65.919	ENSCSAVG00000010109	-	59	63.248	Ciona_savignyi
ENSNBRG00000003126	snrnp70	96	92.377	ENSCANG00000036607	SNRNP70	90	92.377	Colobus_angolensis_palliatus
ENSNBRG00000003126	snrnp70	96	92.377	ENSCGRG00001020676	Snrnp70	50	92.377	Cricetulus_griseus_chok1gshd
ENSNBRG00000003126	snrnp70	96	92.377	ENSCGRG00000018048	Snrnp70	50	92.377	Cricetulus_griseus_crigri
ENSNBRG00000003126	snrnp70	96	96.429	ENSCSEG00000011978	snrnp70	99	96.429	Cynoglossus_semilaevis
ENSNBRG00000003126	snrnp70	68	95.597	ENSCVAG00000003912	snrnp70	99	95.597	Cyprinodon_variegatus
ENSNBRG00000003126	snrnp70	97	95.556	ENSDARG00000077126	snrnp70	99	95.031	Danio_rerio
ENSNBRG00000003126	snrnp70	70	89.024	ENSDNOG00000035849	-	99	89.024	Dasypus_novemcinctus
ENSNBRG00000003126	snrnp70	96	92.377	ENSDORG00000010228	Snrnp70	50	92.377	Dipodomys_ordii
ENSNBRG00000003126	snrnp70	96	92.377	ENSEASG00005004917	SNRNP70	51	92.377	Equus_asinus_asinus
ENSNBRG00000003126	snrnp70	70	89.024	ENSECAG00000013936	-	99	89.024	Equus_caballus
ENSNBRG00000003126	snrnp70	96	70.852	ENSEEUG00000005666	SNRNP70	51	70.852	Erinaceus_europaeus
ENSNBRG00000003126	snrnp70	96	92.377	ENSFCAG00000042603	SNRNP70	53	92.377	Felis_catus
ENSNBRG00000003126	snrnp70	96	92.377	ENSFDAG00000013830	SNRNP70	95	91.358	Fukomys_damarensis
ENSNBRG00000003126	snrnp70	97	96.035	ENSGMOG00000011492	snrnp70	100	96.035	Gadus_morhua
ENSNBRG00000003126	snrnp70	97	96.903	ENSGACG00000000448	snrnp70	71	96.903	Gasterosteus_aculeatus
ENSNBRG00000003126	snrnp70	68	73.846	ENSGAGG00000012628	SNRNP70	99	71.282	Gopherus_agassizii
ENSNBRG00000003126	snrnp70	96	92.377	ENSGGOG00000008245	SNRNP70	99	89.024	Gorilla_gorilla
ENSNBRG00000003126	snrnp70	70	89.024	ENSHGLG00100001651	-	99	89.024	Heterocephalus_glaber_male
ENSNBRG00000003126	snrnp70	70	89.024	ENSSTOG00000013988	-	99	89.024	Ictidomys_tridecemlineatus
ENSNBRG00000003126	snrnp70	96	92.377	ENSJJAG00000002614	Snrnp70	50	92.377	Jaculus_jaculus
ENSNBRG00000003126	snrnp70	96	92.377	ENSLAFG00000028536	SNRNP70	97	92.377	Loxodonta_africana
ENSNBRG00000003126	snrnp70	96	92.377	ENSMFAG00000039824	SNRNP70	51	92.377	Macaca_fascicularis
ENSNBRG00000003126	snrnp70	93	92.593	ENSMMUG00000004928	SNRNP70	99	89.024	Macaca_mulatta
ENSNBRG00000003126	snrnp70	96	92.377	ENSMNEG00000038057	SNRNP70	52	92.377	Macaca_nemestrina
ENSNBRG00000003126	snrnp70	96	92.377	ENSMLEG00000030967	SNRNP70	51	92.377	Mandrillus_leucophaeus
ENSNBRG00000003126	snrnp70	96	92.377	ENSMAUG00000020970	Snrnp70	50	92.377	Mesocricetus_auratus
ENSNBRG00000003126	snrnp70	96	92.377	ENSMICG00000038437	SNRNP70	99	89.024	Microcebus_murinus
ENSNBRG00000003126	snrnp70	96	92.377	ENSMOCG00000012825	Snrnp70	50	92.377	Microtus_ochrogaster
ENSNBRG00000003126	snrnp70	96	92.377	MGP_CAROLIEiJ_G0029714	Snrnp70	100	90.826	Mus_caroli
ENSNBRG00000003126	snrnp70	96	92.377	ENSMUSG00000063511	Snrnp70	100	90.826	Mus_musculus
ENSNBRG00000003126	snrnp70	96	92.377	MGP_PahariEiJ_G0012939	Snrnp70	100	90.826	Mus_pahari
ENSNBRG00000003126	snrnp70	96	92.377	MGP_SPRETEiJ_G0030812	Snrnp70	100	90.826	Mus_spretus
ENSNBRG00000003126	snrnp70	96	92.377	ENSMPUG00000003258	SNRNP70	51	92.377	Mustela_putorius_furo
ENSNBRG00000003126	snrnp70	96	92.377	ENSMLUG00000011766	SNRNP70	51	92.377	Myotis_lucifugus
ENSNBRG00000003126	snrnp70	96	92.377	ENSNGAG00000021191	Snrnp70	95	91.358	Nannospalax_galili
ENSNBRG00000003126	snrnp70	93	92.166	ENSNLEG00000004899	SNRNP70	87	92.166	Nomascus_leucogenys
ENSNBRG00000003126	snrnp70	98	98.684	ENSONIG00000007822	snrnp70	53	98.684	Oreochromis_niloticus
ENSNBRG00000003126	snrnp70	98	90.351	ENSOANG00000005213	SNRNP70	98	90.351	Ornithorhynchus_anatinus
ENSNBRG00000003126	snrnp70	96	91.964	ENSOGAG00000029310	SNRNP70	51	90.179	Otolemur_garnettii
ENSNBRG00000003126	snrnp70	95	92.342	ENSOARG00000012608	SNRNP70	60	92.342	Ovis_aries
ENSNBRG00000003126	snrnp70	96	92.377	ENSPPAG00000035067	SNRNP70	99	89.024	Pan_paniscus
ENSNBRG00000003126	snrnp70	96	92.377	ENSPPRG00000005579	SNRNP70	51	92.377	Panthera_pardus
ENSNBRG00000003126	snrnp70	96	92.377	ENSPTRG00000011277	SNRNP70	99	89.024	Pan_troglodytes
ENSNBRG00000003126	snrnp70	96	92.377	ENSPANG00000004068	SNRNP70	51	92.377	Papio_anubis
ENSNBRG00000003126	snrnp70	70	83.333	ENSPKIG00000019992	snrnp70	86	83.333	Paramormyrops_kingsleyae
ENSNBRG00000003126	snrnp70	95	81.081	ENSPSIG00000015251	SNRNP70	88	78.571	Pelodiscus_sinensis
ENSNBRG00000003126	snrnp70	69	95.652	ENSPMGG00000010153	snrnp70	77	95.652	Periophthalmus_magnuspinnatus
ENSNBRG00000003126	snrnp70	96	92.377	ENSPEMG00000019011	Snrnp70	50	92.377	Peromyscus_maniculatus_bairdii
ENSNBRG00000003126	snrnp70	83	82.383	ENSPMAG00000008502	snrnp70	97	81.818	Petromyzon_marinus
ENSNBRG00000003126	snrnp70	93	92.627	ENSPCIG00000007296	SNRNP70	52	92.342	Phascolarctos_cinereus
ENSNBRG00000003126	snrnp70	96	91.480	ENSPPYG00000010234	SNRNP70	51	91.480	Pongo_abelii
ENSNBRG00000003126	snrnp70	96	83.857	ENSPCOG00000023103	SNRNP70	79	83.857	Propithecus_coquereli
ENSNBRG00000003126	snrnp70	96	86.099	ENSPVAG00000009578	SNRNP70	51	86.099	Pteropus_vampyrus
ENSNBRG00000003126	snrnp70	96	92.377	ENSRBIG00000042387	SNRNP70	83	92.377	Rhinopithecus_bieti
ENSNBRG00000003126	snrnp70	96	92.377	ENSRROG00000033636	SNRNP70	83	92.377	Rhinopithecus_roxellana
ENSNBRG00000003126	snrnp70	96	92.377	ENSSBOG00000020026	SNRNP70	99	89.024	Saimiri_boliviensis_boliviensis
ENSNBRG00000003126	snrnp70	93	92.627	ENSSHAG00000002194	SNRNP70	52	92.342	Sarcophilus_harrisii
ENSNBRG00000003126	snrnp70	93	94.009	ENSSPUG00000016621	SNRNP70	52	93.694	Sphenodon_punctatus
ENSNBRG00000003126	snrnp70	70	89.024	ENSSSCG00000023792	-	99	89.024	Sus_scrofa
ENSNBRG00000003126	snrnp70	96	92.377	ENSTTRG00000017099	SNRNP70	51	92.377	Tursiops_truncatus
ENSNBRG00000003126	snrnp70	96	92.377	ENSUAMG00000016147	SNRNP70	51	92.377	Ursus_americanus
ENSNBRG00000003126	snrnp70	96	92.377	ENSUMAG00000001467	SNRNP70	99	89.024	Ursus_maritimus
ENSNBRG00000003126	snrnp70	95	78.733	ENSVPAG00000005959	-	100	78.733	Vicugna_pacos
ENSNBRG00000003126	snrnp70	96	92.377	ENSVVUG00000022976	SNRNP70	99	89.024	Vulpes_vulpes
ENSNBRG00000003126	snrnp70	95	91.441	ENSXETG00000022919	snrnp70	56	91.441	Xenopus_tropicalis