EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003198 (Gene tree)
Gene ID: 102796683
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanine--tRNA ligase beta subunit-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 23216 bases
Position: chrJH422350.1:2061448-2084663
Accession: 102796683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004074	B3_4	PF03483.17	1.1e-27	1	1
ENSNBRP00000004059	B3_4	PF03483.17	2.3e-27	1	1
ENSNBRP00000004074	B5	PF03484.15	1.5e-15	1	1
ENSNBRP00000004059	B5	PF03484.15	3.8e-15	1	1
ENSNBRP00000004059	EF1_GNE	PF00736.19	6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004193	-	2838	XM_006801158	ENSNBRP00000004059	848 (aa)	XP_006801221	UPI0003EC4929
ENSNBRT00000004208	-	1695	-	ENSNBRP00000004074	564 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000003198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003198	farsb	100	72.496	ENSG00000116120	FARSB	100	76.610	Homo_sapiens
ENSNBRG00000003198	farsb	100	91.156	ENSAPOG00000013072	farsb	100	91.156	Acanthochromis_polyacanthus
ENSNBRG00000003198	farsb	100	72.496	ENSAMEG00000005984	FARSB	100	76.780	Ailuropoda_melanoleuca
ENSNBRG00000003198	farsb	100	89.703	ENSACIG00000021623	farsb	100	90.662	Amphilophus_citrinellus
ENSNBRG00000003198	farsb	100	90.920	ENSAOCG00000004912	farsb	100	90.920	Amphiprion_ocellaris
ENSNBRG00000003198	farsb	100	90.920	ENSAPEG00000001153	farsb	100	90.920	Amphiprion_percula
ENSNBRG00000003198	farsb	100	89.387	ENSATEG00000021441	farsb	100	89.387	Anabas_testudineus
ENSNBRG00000003198	farsb	99	72.041	ENSAPLG00000010292	FARSB	99	76.158	Anas_platyrhynchos
ENSNBRG00000003198	farsb	100	72.666	ENSACAG00000004769	FARSB	98	76.740	Anolis_carolinensis
ENSNBRG00000003198	farsb	100	72.156	ENSANAG00000024637	FARSB	100	76.271	Aotus_nancymaae
ENSNBRG00000003198	farsb	100	98.585	ENSACLG00000013951	farsb	100	98.585	Astatotilapia_calliptera
ENSNBRG00000003198	farsb	96	71.009	ENSAMXG00000033881	farsb	100	82.164	Astyanax_mexicanus
ENSNBRG00000003198	farsb	100	72.496	ENSBTAG00000011649	FARSB	100	76.780	Bos_taurus
ENSNBRG00000003198	farsb	96	71.277	ENSBTAG00000045523	-	100	75.752	Bos_taurus
ENSNBRG00000003198	farsb	100	56.757	WBGene00001498	fars-3	100	59.122	Caenorhabditis_elegans
ENSNBRG00000003198	farsb	100	72.496	ENSCJAG00000012181	FARSB	100	76.610	Callithrix_jacchus
ENSNBRG00000003198	farsb	100	73.005	ENSCAFG00000016094	-	100	77.288	Canis_familiaris
ENSNBRG00000003198	farsb	100	71.256	ENSCAFG00020026684	FARSB	100	76.773	Canis_lupus_dingo
ENSNBRG00000003198	farsb	100	72.835	ENSCHIG00000014275	FARSB	100	77.119	Capra_hircus
ENSNBRG00000003198	farsb	100	71.817	ENSTSYG00000008461	FARSB	100	75.932	Carlito_syrichta
ENSNBRG00000003198	farsb	95	66.667	ENSCAPG00000016436	FARSB	99	69.913	Cavia_aperea
ENSNBRG00000003198	farsb	100	72.496	ENSCPOG00000013109	FARSB	100	76.102	Cavia_porcellus
ENSNBRG00000003198	farsb	100	68.081	ENSCCAG00000025840	FARSB	100	72.203	Cebus_capucinus
ENSNBRG00000003198	farsb	100	72.496	ENSCATG00000036168	FARSB	100	76.610	Cercocebus_atys
ENSNBRG00000003198	farsb	100	72.666	ENSCLAG00000011954	FARSB	100	76.949	Chinchilla_lanigera
ENSNBRG00000003198	farsb	100	72.496	ENSCSAG00000007806	FARSB	100	76.610	Chlorocebus_sabaeus
ENSNBRG00000003198	farsb	81	87.059	ENSCHOG00000011785	FARSB	81	86.517	Choloepus_hoffmanni
ENSNBRG00000003198	farsb	100	73.175	ENSCPBG00000019346	FARSB	98	77.419	Chrysemys_picta_bellii
ENSNBRG00000003198	farsb	99	59.129	ENSCING00000004180	-	99	60.804	Ciona_intestinalis
ENSNBRG00000003198	farsb	99	59.532	ENSCSAVG00000005346	-	99	61.706	Ciona_savignyi
ENSNBRG00000003198	farsb	96	72.232	ENSCANG00000036239	FARSB	100	76.316	Colobus_angolensis_palliatus
ENSNBRG00000003198	farsb	100	72.835	ENSCGRG00001022928	Farsb	100	77.119	Cricetulus_griseus_chok1gshd
ENSNBRG00000003198	farsb	100	72.835	ENSCGRG00000001513	Farsb	100	77.119	Cricetulus_griseus_crigri
ENSNBRG00000003198	farsb	100	86.927	ENSCSEG00000005415	farsb	99	91.680	Cynoglossus_semilaevis
ENSNBRG00000003198	farsb	75	80.000	ENSCVAG00000018815	farsb	98	87.333	Cyprinodon_variegatus
ENSNBRG00000003198	farsb	100	79.188	ENSDARG00000016864	farsb	100	84.576	Danio_rerio
ENSNBRG00000003198	farsb	100	71.647	ENSDNOG00000002511	FARSB	100	75.254	Dasypus_novemcinctus
ENSNBRG00000003198	farsb	100	72.835	ENSDORG00000011102	Farsb	100	76.441	Dipodomys_ordii
ENSNBRG00000003198	farsb	100	61.616	FBgn0039175	beta-PheRS	100	63.744	Drosophila_melanogaster
ENSNBRG00000003198	farsb	96	70.299	ENSETEG00000015080	FARSB	100	74.386	Echinops_telfairi
ENSNBRG00000003198	farsb	100	61.695	ENSEBUG00000006846	farsb	100	65.254	Eptatretus_burgeri
ENSNBRG00000003198	farsb	100	72.666	ENSEASG00005011297	FARSB	100	76.949	Equus_asinus_asinus
ENSNBRG00000003198	farsb	100	70.164	ENSECAG00000023086	FARSB	98	77.449	Equus_caballus
ENSNBRG00000003198	farsb	90	70.213	ENSEEUG00000007441	FARSB	91	70.213	Erinaceus_europaeus
ENSNBRG00000003198	farsb	97	80.911	ENSELUG00000014767	farsb	99	86.340	Esox_lucius
ENSNBRG00000003198	farsb	100	72.496	ENSFCAG00000026772	FARSB	100	76.949	Felis_catus
ENSNBRG00000003198	farsb	96	71.880	ENSFALG00000006739	FARSB	96	75.571	Ficedula_albicollis
ENSNBRG00000003198	farsb	100	72.666	ENSFDAG00000008871	FARSB	100	76.780	Fukomys_damarensis
ENSNBRG00000003198	farsb	100	87.146	ENSFHEG00000020939	farsb	98	92.037	Fundulus_heteroclitus
ENSNBRG00000003198	farsb	91	80.519	ENSGMOG00000013047	farsb	99	85.714	Gadus_morhua
ENSNBRG00000003198	farsb	100	73.345	ENSGALG00000005236	FARSB	100	77.080	Gallus_gallus
ENSNBRG00000003198	farsb	100	86.085	ENSGAFG00000020900	farsb	100	86.085	Gambusia_affinis
ENSNBRG00000003198	farsb	91	83.889	ENSGACG00000000261	farsb	99	89.610	Gasterosteus_aculeatus
ENSNBRG00000003198	farsb	100	73.345	ENSGAGG00000016575	FARSB	98	77.759	Gopherus_agassizii
ENSNBRG00000003198	farsb	100	98.821	ENSHBUG00000022379	farsb	100	98.821	Haplochromis_burtoni
ENSNBRG00000003198	farsb	100	72.666	ENSHGLG00000015965	FARSB	100	76.780	Heterocephalus_glaber_female
ENSNBRG00000003198	farsb	100	72.666	ENSHGLG00100001035	FARSB	100	76.780	Heterocephalus_glaber_male
ENSNBRG00000003198	farsb	91	85.385	ENSHCOG00000016462	farsb	100	85.385	Hippocampus_comes
ENSNBRG00000003198	farsb	100	78.983	ENSIPUG00000002754	farsb	100	83.871	Ictalurus_punctatus
ENSNBRG00000003198	farsb	100	73.005	ENSSTOG00000016169	FARSB	100	77.119	Ictidomys_tridecemlineatus
ENSNBRG00000003198	farsb	100	72.326	ENSJJAG00000003267	Farsb	100	76.610	Jaculus_jaculus
ENSNBRG00000003198	farsb	100	81.229	ENSKMAG00000005363	farsb	100	82.770	Kryptolebias_marmoratus
ENSNBRG00000003198	farsb	100	87.618	ENSLBEG00000018127	farsb	100	87.972	Labrus_bergylta
ENSNBRG00000003198	farsb	100	75.042	ENSLACG00000002551	FARSB	100	79.796	Latimeria_chalumnae
ENSNBRG00000003198	farsb	100	79.592	ENSLOCG00000004136	farsb	100	84.720	Lepisosteus_oculatus
ENSNBRG00000003198	farsb	100	72.666	ENSLAFG00000015659	FARSB	100	76.271	Loxodonta_africana
ENSNBRG00000003198	farsb	100	72.326	ENSMFAG00000036645	FARSB	100	76.441	Macaca_fascicularis
ENSNBRG00000003198	farsb	100	70.119	ENSMMUG00000007685	FARSB	100	74.237	Macaca_mulatta
ENSNBRG00000003198	farsb	100	72.156	ENSMNEG00000030672	FARSB	100	76.271	Macaca_nemestrina
ENSNBRG00000003198	farsb	100	72.496	ENSMLEG00000042060	FARSB	100	76.610	Mandrillus_leucophaeus
ENSNBRG00000003198	farsb	100	89.059	ENSMAMG00000011835	farsb	100	89.059	Mastacembelus_armatus
ENSNBRG00000003198	farsb	96	95.009	ENSMZEG00005004544	farsb	100	95.398	Maylandia_zebra
ENSNBRG00000003198	farsb	95	71.914	ENSMGAG00000004670	FARSB	100	76.208	Meleagris_gallopavo
ENSNBRG00000003198	farsb	71	78.125	ENSMAUG00000017805	Farsb	100	78.125	Mesocricetus_auratus
ENSNBRG00000003198	farsb	100	74.346	ENSMICG00000002495	FARSB	100	77.288	Microcebus_murinus
ENSNBRG00000003198	farsb	100	74.527	ENSMOCG00000003181	Farsb	100	77.589	Microtus_ochrogaster
ENSNBRG00000003198	farsb	100	81.152	ENSMMOG00000006265	farsb	100	82.003	Mola_mola
ENSNBRG00000003198	farsb	100	73.345	ENSMODG00000021192	FARSB	100	77.419	Monodelphis_domestica
ENSNBRG00000003198	farsb	93	86.025	ENSMALG00000021188	farsb	92	92.377	Monopterus_albus
ENSNBRG00000003198	farsb	100	72.666	MGP_CAROLIEiJ_G0014310	Farsb	100	76.610	Mus_caroli
ENSNBRG00000003198	farsb	100	72.666	ENSMUSG00000026245	Farsb	100	76.441	Mus_musculus
ENSNBRG00000003198	farsb	100	72.496	MGP_PahariEiJ_G0027548	Farsb	100	76.610	Mus_pahari
ENSNBRG00000003198	farsb	100	72.496	MGP_SPRETEiJ_G0015116	Farsb	100	76.441	Mus_spretus
ENSNBRG00000003198	farsb	100	72.496	ENSMPUG00000016677	FARSB	100	76.610	Mustela_putorius_furo
ENSNBRG00000003198	farsb	100	73.005	ENSMLUG00000010904	FARSB	100	77.288	Myotis_lucifugus
ENSNBRG00000003198	farsb	100	71.939	ENSNGAG00000014602	Farsb	100	75.891	Nannospalax_galili
ENSNBRG00000003198	farsb	100	72.666	ENSNLEG00000009638	FARSB	100	76.780	Nomascus_leucogenys
ENSNBRG00000003198	farsb	100	63.158	ENSMEUG00000010798	FARSB	100	67.402	Notamacropus_eugenii
ENSNBRG00000003198	farsb	100	56.853	ENSOPRG00000003292	FARSB	100	57.264	Ochotona_princeps
ENSNBRG00000003198	farsb	100	73.005	ENSODEG00000005451	FARSB	100	76.780	Octodon_degus
ENSNBRG00000003198	farsb	100	92.190	ENSONIG00000014639	farsb	100	98.812	Oreochromis_niloticus
ENSNBRG00000003198	farsb	90	69.907	ENSOANG00000015387	FARSB	99	74.719	Ornithorhynchus_anatinus
ENSNBRG00000003198	farsb	91	73.371	ENSOCUG00000007828	FARSB	94	77.323	Oryctolagus_cuniculus
ENSNBRG00000003198	farsb	100	87.382	ENSORLG00000009135	farsb	100	89.474	Oryzias_latipes
ENSNBRG00000003198	farsb	100	87.264	ENSORLG00015001072	farsb	100	88.287	Oryzias_latipes_hsok
ENSNBRG00000003198	farsb	100	87.736	ENSOMEG00000019009	farsb	100	87.736	Oryzias_melastigma
ENSNBRG00000003198	farsb	100	67.504	ENSOGAG00000010125	FARSB	100	71.237	Otolemur_garnettii
ENSNBRG00000003198	farsb	100	72.835	ENSOARG00000020329	FARSB	100	77.119	Ovis_aries
ENSNBRG00000003198	farsb	100	73.005	ENSPPAG00000039268	FARSB	100	77.119	Pan_paniscus
ENSNBRG00000003198	farsb	100	72.326	ENSPPRG00000010687	FARSB	100	76.780	Panthera_pardus
ENSNBRG00000003198	farsb	100	71.986	ENSPTIG00000004299	FARSB	100	76.441	Panthera_tigris_altaica
ENSNBRG00000003198	farsb	100	73.005	ENSPTRG00000012974	FARSB	100	77.119	Pan_troglodytes
ENSNBRG00000003198	farsb	100	72.496	ENSPANG00000016304	FARSB	100	76.610	Papio_anubis
ENSNBRG00000003198	farsb	100	78.608	ENSPKIG00000006661	farsb	100	82.683	Paramormyrops_kingsleyae
ENSNBRG00000003198	farsb	99	72.232	ENSPSIG00000006248	FARSB	99	76.661	Pelodiscus_sinensis
ENSNBRG00000003198	farsb	82	86.555	ENSPMGG00000002815	farsb	100	89.980	Periophthalmus_magnuspinnatus
ENSNBRG00000003198	farsb	100	72.666	ENSPEMG00000003131	Farsb	100	76.780	Peromyscus_maniculatus_bairdii
ENSNBRG00000003198	farsb	100	73.005	ENSPCIG00000019458	FARSB	100	77.080	Phascolarctos_cinereus
ENSNBRG00000003198	farsb	100	87.382	ENSPLAG00000001104	farsb	100	87.382	Poecilia_latipinna
ENSNBRG00000003198	farsb	100	87.972	ENSPMEG00000017658	farsb	100	87.972	Poecilia_mexicana
ENSNBRG00000003198	farsb	100	87.618	ENSPREG00000010583	farsb	100	87.618	Poecilia_reticulata
ENSNBRG00000003198	farsb	100	72.666	ENSPPYG00000013221	FARSB	100	76.780	Pongo_abelii
ENSNBRG00000003198	farsb	82	67.086	ENSPCAG00000002757	FARSB	84	69.014	Procavia_capensis
ENSNBRG00000003198	farsb	66	85.714	ENSPCOG00000028852	FARSB	100	85.714	Propithecus_coquereli
ENSNBRG00000003198	farsb	100	72.326	ENSPVAG00000006985	FARSB	100	76.441	Pteropus_vampyrus
ENSNBRG00000003198	farsb	100	76.231	ENSPNYG00000011433	farsb	100	82.683	Pundamilia_nyererei
ENSNBRG00000003198	farsb	100	79.661	ENSPNAG00000021802	farsb	100	84.380	Pygocentrus_nattereri
ENSNBRG00000003198	farsb	100	72.156	ENSRNOG00000014119	Farsb	100	76.441	Rattus_norvegicus
ENSNBRG00000003198	farsb	91	72.222	ENSRBIG00000033191	FARSB	97	76.710	Rhinopithecus_bieti
ENSNBRG00000003198	farsb	100	72.496	ENSRROG00000029388	FARSB	100	76.610	Rhinopithecus_roxellana
ENSNBRG00000003198	farsb	100	44.059	YLR060W	FRS1	100	45.738	Saccharomyces_cerevisiae
ENSNBRG00000003198	farsb	100	64.856	ENSSBOG00000019084	FARSB	100	68.983	Saimiri_boliviensis_boliviensis
ENSNBRG00000003198	farsb	91	66.910	ENSSHAG00000015752	FARSB	99	71.481	Sarcophilus_harrisii
ENSNBRG00000003198	farsb	100	76.871	ENSSFOG00015007850	farsb	100	81.834	Scleropages_formosus
ENSNBRG00000003198	farsb	100	89.739	ENSSMAG00000020668	farsb	100	90.662	Scophthalmus_maximus
ENSNBRG00000003198	farsb	100	88.625	ENSSDUG00000009685	farsb	100	90.215	Seriola_dumerili
ENSNBRG00000003198	farsb	100	90.235	ENSSLDG00000025206	farsb	100	90.353	Seriola_lalandi_dorsalis
ENSNBRG00000003198	farsb	57	76.552	ENSSARG00000005655	-	65	76.552	Sorex_araneus
ENSNBRG00000003198	farsb	95	68.449	ENSSPUG00000002245	FARSB	100	73.084	Sphenodon_punctatus
ENSNBRG00000003198	farsb	100	89.988	ENSSPAG00000007367	farsb	100	89.988	Stegastes_partitus
ENSNBRG00000003198	farsb	100	71.477	ENSSSCG00000016226	-	100	75.763	Sus_scrofa
ENSNBRG00000003198	farsb	100	66.214	ENSSSCG00000032016	-	100	70.508	Sus_scrofa
ENSNBRG00000003198	farsb	96	71.705	ENSTGUG00000007788	FARSB	99	75.220	Taeniopygia_guttata
ENSNBRG00000003198	farsb	100	83.844	ENSTRUG00000009483	farsb	100	83.844	Takifugu_rubripes
ENSNBRG00000003198	farsb	100	81.154	ENSTNIG00000014310	farsb	100	86.418	Tetraodon_nigroviridis
ENSNBRG00000003198	farsb	100	48.727	ENSTBEG00000003136	FARSB	100	52.881	Tupaia_belangeri
ENSNBRG00000003198	farsb	88	76.382	ENSTTRG00000009082	FARSB	88	76.382	Tursiops_truncatus
ENSNBRG00000003198	farsb	82	70.711	ENSUAMG00000024613	FARSB	98	72.892	Ursus_americanus
ENSNBRG00000003198	farsb	100	72.666	ENSUMAG00000017995	FARSB	100	76.949	Ursus_maritimus
ENSNBRG00000003198	farsb	91	69.686	ENSVPAG00000006844	FARSB	100	73.616	Vicugna_pacos
ENSNBRG00000003198	farsb	100	74.310	ENSVVUG00000024025	FARSB	100	77.288	Vulpes_vulpes
ENSNBRG00000003198	farsb	100	71.864	ENSXETG00000002934	farsb	100	75.932	Xenopus_tropicalis
ENSNBRG00000003198	farsb	100	86.557	ENSXMAG00000008280	farsb	100	86.557	Xiphophorus_maculatus