EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003245 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 4044 bases
Position: chrJH422502.1:526400-530443
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004064	MMR_HSR1	PF01926.23	1.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004198	-	1704	-	ENSNBRP00000004064	567 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000003245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003245	-	50	42.953	ENSNBRG00000020422	-	81	50.691
ENSNBRG00000003245	-	65	50.000	ENSNBRG00000005951	-	88	49.731
ENSNBRG00000003245	-	66	61.579	ENSNBRG00000003083	-	94	58.621
ENSNBRG00000003245	-	50	67.708	ENSNBRG00000003452	-	83	67.820
ENSNBRG00000003245	-	50	65.398	ENSNBRG00000005934	-	85	66.084
ENSNBRG00000003245	-	55	59.752	ENSNBRG00000023111	-	85	65.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003245	-	88	53.890	ENSAPOG00000008987	-	90	53.510	Acanthochromis_polyacanthus
ENSNBRG00000003245	-	88	53.890	ENSAPOG00000017368	-	92	53.510	Acanthochromis_polyacanthus
ENSNBRG00000003245	-	87	47.695	ENSAPOG00000009034	-	88	47.295	Acanthochromis_polyacanthus
ENSNBRG00000003245	-	98	55.814	ENSACIG00000005198	-	92	54.945	Amphilophus_citrinellus
ENSNBRG00000003245	-	97	65.756	ENSAOCG00000022545	-	97	66.120	Amphiprion_ocellaris
ENSNBRG00000003245	-	95	44.161	ENSAOCG00000001095	-	82	43.613	Amphiprion_ocellaris
ENSNBRG00000003245	-	59	55.490	ENSATEG00000011735	-	89	55.689	Anabas_testudineus
ENSNBRG00000003245	-	75	55.116	ENSATEG00000012058	-	85	54.884	Anabas_testudineus
ENSNBRG00000003245	-	79	54.241	ENSATEG00000011352	-	96	47.100	Anabas_testudineus
ENSNBRG00000003245	-	96	44.203	ENSATEG00000011330	-	80	49.770	Anabas_testudineus
ENSNBRG00000003245	-	80	49.673	ENSATEG00000011336	-	83	51.136	Anabas_testudineus
ENSNBRG00000003245	-	88	49.126	ENSACLG00000004980	-	92	48.837	Astatotilapia_calliptera
ENSNBRG00000003245	-	69	64.160	ENSACLG00000005220	-	89	65.684	Astatotilapia_calliptera
ENSNBRG00000003245	-	89	53.229	ENSACLG00000012195	-	86	57.238	Astatotilapia_calliptera
ENSNBRG00000003245	-	98	54.107	ENSACLG00000005679	-	96	54.821	Astatotilapia_calliptera
ENSNBRG00000003245	-	83	49.217	ENSACLG00000024857	-	75	50.901	Astatotilapia_calliptera
ENSNBRG00000003245	-	95	43.502	ENSACLG00000024859	-	84	41.848	Astatotilapia_calliptera
ENSNBRG00000003245	-	50	48.322	ENSAMXG00000030288	-	67	50.202	Astyanax_mexicanus
ENSNBRG00000003245	-	58	41.739	ENSAMXG00000041224	-	56	51.802	Astyanax_mexicanus
ENSNBRG00000003245	-	54	48.065	ENSAMXG00000030783	-	78	50.719	Astyanax_mexicanus
ENSNBRG00000003245	-	67	56.283	ENSCVAG00000023267	-	86	51.168	Cyprinodon_variegatus
ENSNBRG00000003245	-	95	40.325	ENSCVAG00000018481	-	91	39.046	Cyprinodon_variegatus
ENSNBRG00000003245	-	61	45.161	ENSDARG00000086048	si:ch211-229i14.2	84	46.914	Danio_rerio
ENSNBRG00000003245	-	84	50.000	ENSELUG00000015135	-	63	48.318	Esox_lucius
ENSNBRG00000003245	-	51	50.347	ENSELUG00000015076	si:ch211-229i14.2	60	49.375	Esox_lucius
ENSNBRG00000003245	-	51	51.625	ENSELUG00000005405	-	83	51.311	Esox_lucius
ENSNBRG00000003245	-	73	54.286	ENSFHEG00000000207	-	85	59.682	Fundulus_heteroclitus
ENSNBRG00000003245	-	84	49.393	ENSFHEG00000011334	-	81	50.664	Fundulus_heteroclitus
ENSNBRG00000003245	-	96	60.917	ENSFHEG00000019202	-	95	60.917	Fundulus_heteroclitus
ENSNBRG00000003245	-	96	62.202	ENSFHEG00000013865	-	95	62.202	Fundulus_heteroclitus
ENSNBRG00000003245	-	97	50.811	ENSGAFG00000015908	-	79	49.730	Gambusia_affinis
ENSNBRG00000003245	-	99	41.301	ENSGAFG00000015999	-	94	41.125	Gambusia_affinis
ENSNBRG00000003245	-	81	56.347	ENSGAFG00000015917	-	86	56.629	Gambusia_affinis
ENSNBRG00000003245	-	96	47.935	ENSGAFG00000001852	-	93	46.858	Gambusia_affinis
ENSNBRG00000003245	-	70	48.849	ENSGACG00000013107	-	83	48.670	Gasterosteus_aculeatus
ENSNBRG00000003245	-	97	75.145	ENSHBUG00000011672	-	97	73.684	Haplochromis_burtoni
ENSNBRG00000003245	-	80	51.648	ENSHBUG00000003015	-	80	52.809	Haplochromis_burtoni
ENSNBRG00000003245	-	99	79.004	ENSHBUG00000020633	-	98	79.004	Haplochromis_burtoni
ENSNBRG00000003245	-	89	53.620	ENSHBUG00000010247	-	86	57.684	Haplochromis_burtoni
ENSNBRG00000003245	-	86	59.146	ENSHBUG00000013269	-	79	63.063	Haplochromis_burtoni
ENSNBRG00000003245	-	77	42.955	ENSIPUG00000004161	-	65	45.797	Ictalurus_punctatus
ENSNBRG00000003245	-	81	50.219	ENSKMAG00000010851	-	86	50.562	Kryptolebias_marmoratus
ENSNBRG00000003245	-	95	42.446	ENSKMAG00000010293	-	93	43.400	Kryptolebias_marmoratus
ENSNBRG00000003245	-	63	63.260	ENSLBEG00000012647	-	82	65.970	Labrus_bergylta
ENSNBRG00000003245	-	61	65.903	ENSLBEG00000022878	-	86	65.970	Labrus_bergylta
ENSNBRG00000003245	-	51	69.338	ENSLBEG00000010625	-	87	69.338	Labrus_bergylta
ENSNBRG00000003245	-	86	61.523	ENSMAMG00000018170	-	89	66.740	Mastacembelus_armatus
ENSNBRG00000003245	-	82	53.602	ENSMAMG00000018175	-	82	58.057	Mastacembelus_armatus
ENSNBRG00000003245	-	95	43.303	ENSMAMG00000017849	-	97	41.198	Mastacembelus_armatus
ENSNBRG00000003245	-	65	45.946	ENSMAMG00000018061	-	82	45.833	Mastacembelus_armatus
ENSNBRG00000003245	-	71	65.686	ENSMAMG00000018162	si:ch211-229i14.2	84	67.013	Mastacembelus_armatus
ENSNBRG00000003245	-	77	47.140	ENSMAMG00000017884	-	80	46.347	Mastacembelus_armatus
ENSNBRG00000003245	-	78	44.470	ENSMZEG00005028364	-	89	45.516	Maylandia_zebra
ENSNBRG00000003245	-	87	46.429	ENSMALG00000001082	-	90	57.963	Monopterus_albus
ENSNBRG00000003245	-	69	45.405	ENSMALG00000004282	-	89	45.946	Monopterus_albus
ENSNBRG00000003245	-	72	60.688	ENSONIG00000000233	-	88	61.008	Oreochromis_niloticus
ENSNBRG00000003245	-	64	61.983	ENSONIG00000000314	-	89	68.831	Oreochromis_niloticus
ENSNBRG00000003245	-	70	59.949	ENSONIG00000013863	-	90	60.263	Oreochromis_niloticus
ENSNBRG00000003245	-	72	58.252	ENSONIG00000011313	-	93	57.592	Oreochromis_niloticus
ENSNBRG00000003245	-	75	52.347	ENSONIG00000010736	-	89	50.000	Oreochromis_niloticus
ENSNBRG00000003245	-	56	72.555	ENSONIG00000012315	-	93	72.555	Oreochromis_niloticus
ENSNBRG00000003245	-	75	52.204	ENSONIG00000004482	-	98	61.832	Oreochromis_niloticus
ENSNBRG00000003245	-	78	49.548	ENSORLG00000017091	-	94	45.225	Oryzias_latipes
ENSNBRG00000003245	-	56	64.151	ENSORLG00000025924	si:ch211-229i14.2	91	57.554	Oryzias_latipes
ENSNBRG00000003245	-	81	47.982	ENSORLG00000030459	-	82	47.758	Oryzias_latipes
ENSNBRG00000003245	-	78	49.321	ENSORLG00020016100	-	95	44.928	Oryzias_latipes_hni
ENSNBRG00000003245	-	86	44.960	ENSORLG00020014225	-	82	46.035	Oryzias_latipes_hni
ENSNBRG00000003245	-	64	61.808	ENSORLG00015004505	-	90	56.330	Oryzias_latipes_hsok
ENSNBRG00000003245	-	78	49.548	ENSORLG00015006787	-	94	44.928	Oryzias_latipes_hsok
ENSNBRG00000003245	-	97	55.596	ENSOMEG00000007494	-	95	54.745	Oryzias_melastigma
ENSNBRG00000003245	-	95	62.531	ENSOMEG00000013595	-	78	63.684	Oryzias_melastigma
ENSNBRG00000003245	-	82	45.182	ENSOMEG00000009393	-	83	46.827	Oryzias_melastigma
ENSNBRG00000003245	-	78	50.670	ENSOMEG00000003632	-	84	50.000	Oryzias_melastigma
ENSNBRG00000003245	-	70	52.525	ENSPFOG00000001388	-	82	52.756	Poecilia_formosa
ENSNBRG00000003245	-	87	44.600	ENSPFOG00000024835	-	82	46.606	Poecilia_formosa
ENSNBRG00000003245	-	77	54.795	ENSPFOG00000022293	-	95	54.795	Poecilia_formosa
ENSNBRG00000003245	-	96	40.835	ENSPFOG00000000973	-	87	39.568	Poecilia_formosa
ENSNBRG00000003245	-	81	51.392	ENSPLAG00000015541	-	84	51.754	Poecilia_latipinna
ENSNBRG00000003245	-	81	55.195	ENSPMEG00000008599	-	90	55.385	Poecilia_mexicana
ENSNBRG00000003245	-	82	50.749	ENSPMEG00000003917	-	84	51.316	Poecilia_mexicana
ENSNBRG00000003245	-	98	58.602	ENSPMEG00000002123	-	97	58.602	Poecilia_mexicana
ENSNBRG00000003245	-	97	42.068	ENSPMEG00000010900	-	92	41.355	Poecilia_mexicana
ENSNBRG00000003245	-	82	51.392	ENSPREG00000017114	-	84	51.754	Poecilia_reticulata
ENSNBRG00000003245	-	96	57.534	ENSPREG00000017086	-	74	56.989	Poecilia_reticulata
ENSNBRG00000003245	-	81	54.095	ENSPREG00000017000	-	88	55.481	Poecilia_reticulata
ENSNBRG00000003245	-	64	53.151	ENSPREG00000006470	-	90	53.100	Poecilia_reticulata
ENSNBRG00000003245	-	81	68.498	ENSPREG00000016826	-	86	51.351	Poecilia_reticulata
ENSNBRG00000003245	-	59	62.018	ENSPNYG00000003568	-	92	62.022	Pundamilia_nyererei
ENSNBRG00000003245	-	96	43.369	ENSPNYG00000008493	-	99	42.246	Pundamilia_nyererei
ENSNBRG00000003245	-	96	54.113	ENSPNYG00000006913	-	95	53.016	Pundamilia_nyererei
ENSNBRG00000003245	-	87	56.713	ENSPNYG00000000712	-	91	56.713	Pundamilia_nyererei
ENSNBRG00000003245	-	58	63.110	ENSPNYG00000004195	-	78	63.415	Pundamilia_nyererei
ENSNBRG00000003245	-	80	51.322	ENSPNYG00000008570	-	80	52.477	Pundamilia_nyererei
ENSNBRG00000003245	-	50	52.448	ENSPNYG00000008579	-	75	56.452	Pundamilia_nyererei
ENSNBRG00000003245	-	53	43.293	ENSPNAG00000026011	-	55	49.115	Pygocentrus_nattereri
ENSNBRG00000003245	-	63	62.745	ENSSDUG00000009253	-	95	61.111	Seriola_dumerili
ENSNBRG00000003245	-	89	58.206	ENSSDUG00000016624	-	73	63.252	Seriola_dumerili
ENSNBRG00000003245	-	79	51.230	ENSSDUG00000016851	-	80	49.433	Seriola_dumerili
ENSNBRG00000003245	-	60	50.661	ENSSDUG00000021006	-	96	50.673	Seriola_dumerili
ENSNBRG00000003245	-	67	45.932	ENSSDUG00000005095	-	83	48.031	Seriola_dumerili
ENSNBRG00000003245	-	97	59.459	ENSSDUG00000005270	-	99	59.459	Seriola_dumerili
ENSNBRG00000003245	-	80	53.187	ENSSLDG00000001533	-	78	63.229	Seriola_lalandi_dorsalis
ENSNBRG00000003245	-	56	62.145	ENSSLDG00000007022	-	74	61.875	Seriola_lalandi_dorsalis
ENSNBRG00000003245	-	59	46.765	ENSSLDG00000013126	-	96	49.133	Seriola_lalandi_dorsalis
ENSNBRG00000003245	-	95	42.755	ENSSPAG00000001386	-	94	41.593	Stegastes_partitus
ENSNBRG00000003245	-	81	64.410	ENSSPAG00000005977	-	93	65.044	Stegastes_partitus
ENSNBRG00000003245	-	76	39.261	ENSTRUG00000025882	-	58	39.030	Takifugu_rubripes
ENSNBRG00000003245	-	80	43.107	ENSTRUG00000020623	-	87	43.267	Takifugu_rubripes
ENSNBRG00000003245	-	88	51.889	ENSXMAG00000027923	-	81	51.462	Xiphophorus_maculatus
ENSNBRG00000003245	-	96	41.135	ENSXMAG00000019889	-	89	40.071	Xiphophorus_maculatus