EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003253 (Gene tree)
Gene ID: 102780202
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2 subunit B-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 6250 bases
Position: chrJH422286.1:2560825-2567074
Accession: 102780202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004112	RNase_H2-Ydr279	PF09468.10	4.8e-16	1	1
ENSNBRP00000004092	RNase_H2-Ydr279	PF09468.10	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004246	-	906	-	ENSNBRP00000004112	301 (aa)	-	-
ENSNBRT00000004226	-	1136	XM_006788215	ENSNBRP00000004092	306 (aa)	XP_006788278	UPI0003EC1907

Gene Model

Click here to download ENSNBRG00000003253's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003253's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003253	rnaseh2b	90	49.821	ENSG00000136104	RNASEH2B	95	55.435	Homo_sapiens
ENSNBRG00000003253	rnaseh2b	100	84.641	ENSAPOG00000010496	rnaseh2b	100	84.641	Acanthochromis_polyacanthus
ENSNBRG00000003253	rnaseh2b	89	49.084	ENSAMEG00000012040	RNASEH2B	92	49.632	Ailuropoda_melanoleuca
ENSNBRG00000003253	rnaseh2b	100	79.734	ENSACIG00000021991	rnaseh2b	100	79.734	Amphilophus_citrinellus
ENSNBRG00000003253	rnaseh2b	100	84.967	ENSAOCG00000013398	rnaseh2b	100	84.967	Amphiprion_ocellaris
ENSNBRG00000003253	rnaseh2b	100	84.641	ENSAPEG00000006033	rnaseh2b	100	84.641	Amphiprion_percula
ENSNBRG00000003253	rnaseh2b	100	81.699	ENSATEG00000008370	rnaseh2b	100	81.699	Anabas_testudineus
ENSNBRG00000003253	rnaseh2b	84	62.403	ENSAPLG00000008955	RNASEH2B	100	63.004	Anas_platyrhynchos
ENSNBRG00000003253	rnaseh2b	93	55.862	ENSACAG00000011679	RNASEH2B	97	55.862	Anolis_carolinensis
ENSNBRG00000003253	rnaseh2b	90	50.365	ENSANAG00000020662	RNASEH2B	88	50.365	Aotus_nancymaae
ENSNBRG00000003253	rnaseh2b	100	97.386	ENSACLG00000000467	rnaseh2b	100	97.386	Astatotilapia_calliptera
ENSNBRG00000003253	rnaseh2b	99	67.974	ENSAMXG00000014351	rnaseh2b	99	67.974	Astyanax_mexicanus
ENSNBRG00000003253	rnaseh2b	90	49.110	ENSBTAG00000020149	RNASEH2B	90	49.110	Bos_taurus
ENSNBRG00000003253	rnaseh2b	89	49.814	ENSCJAG00000008585	-	95	48.432	Callithrix_jacchus
ENSNBRG00000003253	rnaseh2b	75	44.156	ENSCJAG00000003822	-	86	44.156	Callithrix_jacchus
ENSNBRG00000003253	rnaseh2b	98	45.425	ENSCAFG00000004295	RNASEH2B	93	45.752	Canis_familiaris
ENSNBRG00000003253	rnaseh2b	93	47.222	ENSCAFG00020000250	RNASEH2B	94	47.569	Canis_lupus_dingo
ENSNBRG00000003253	rnaseh2b	77	46.983	ENSCHIG00000012982	-	82	46.983	Capra_hircus
ENSNBRG00000003253	rnaseh2b	88	49.630	ENSCHIG00000018220	RNASEH2B	87	50.186	Capra_hircus
ENSNBRG00000003253	rnaseh2b	88	41.791	ENSTSYG00000031177	-	87	42.697	Carlito_syrichta
ENSNBRG00000003253	rnaseh2b	89	48.889	ENSTSYG00000009176	-	88	48.889	Carlito_syrichta
ENSNBRG00000003253	rnaseh2b	89	42.222	ENSCAPG00000009978	RNASEH2B	91	42.751	Cavia_aperea
ENSNBRG00000003253	rnaseh2b	89	47.970	ENSCPOG00000032527	RNASEH2B	87	48.148	Cavia_porcellus
ENSNBRG00000003253	rnaseh2b	89	50.370	ENSCCAG00000026979	RNASEH2B	89	50.186	Cebus_capucinus
ENSNBRG00000003253	rnaseh2b	91	49.110	ENSCATG00000031336	RNASEH2B	79	49.110	Cercocebus_atys
ENSNBRG00000003253	rnaseh2b	89	51.481	ENSCLAG00000003517	RNASEH2B	74	52.045	Chinchilla_lanigera
ENSNBRG00000003253	rnaseh2b	87	50.373	ENSCSAG00000017701	RNASEH2B	81	50.936	Chlorocebus_sabaeus
ENSNBRG00000003253	rnaseh2b	95	39.456	ENSCHOG00000013688	RNASEH2B	95	40.816	Choloepus_hoffmanni
ENSNBRG00000003253	rnaseh2b	99	57.468	ENSCPBG00000008684	RNASEH2B	95	57.468	Chrysemys_picta_bellii
ENSNBRG00000003253	rnaseh2b	95	33.557	ENSCING00000016454	-	96	33.557	Ciona_intestinalis
ENSNBRG00000003253	rnaseh2b	89	49.451	ENSCANG00000041511	-	87	50.000	Colobus_angolensis_palliatus
ENSNBRG00000003253	rnaseh2b	89	51.481	ENSCGRG00001000611	Rnaseh2b	88	51.852	Cricetulus_griseus_chok1gshd
ENSNBRG00000003253	rnaseh2b	89	51.481	ENSCGRG00000006077	Rnaseh2b	88	51.852	Cricetulus_griseus_crigri
ENSNBRG00000003253	rnaseh2b	100	80.065	ENSCSEG00000004910	rnaseh2b	100	80.065	Cynoglossus_semilaevis
ENSNBRG00000003253	rnaseh2b	100	78.105	ENSCVAG00000005212	rnaseh2b	100	78.105	Cyprinodon_variegatus
ENSNBRG00000003253	rnaseh2b	99	71.569	ENSDARG00000005128	rnaseh2b	99	71.569	Danio_rerio
ENSNBRG00000003253	rnaseh2b	89	47.970	ENSDNOG00000049666	-	87	48.519	Dasypus_novemcinctus
ENSNBRG00000003253	rnaseh2b	88	46.840	ENSDNOG00000034290	-	87	47.388	Dasypus_novemcinctus
ENSNBRG00000003253	rnaseh2b	93	48.958	ENSDORG00000010708	Rnaseh2b	93	48.958	Dipodomys_ordii
ENSNBRG00000003253	rnaseh2b	87	37.023	ENSEBUG00000005965	rnaseh2b	100	36.882	Eptatretus_burgeri
ENSNBRG00000003253	rnaseh2b	89	50.741	ENSEASG00005017323	RNASEH2B	87	50.929	Equus_asinus_asinus
ENSNBRG00000003253	rnaseh2b	89	51.111	ENSECAG00000014262	RNASEH2B	87	51.301	Equus_caballus
ENSNBRG00000003253	rnaseh2b	100	73.941	ENSELUG00000019560	rnaseh2b	100	73.941	Esox_lucius
ENSNBRG00000003253	rnaseh2b	87	48.289	ENSFCAG00000014257	RNASEH2B	82	48.855	Felis_catus
ENSNBRG00000003253	rnaseh2b	93	60.279	ENSFALG00000008435	RNASEH2B	97	60.279	Ficedula_albicollis
ENSNBRG00000003253	rnaseh2b	89	50.370	ENSFDAG00000009920	RNASEH2B	94	50.370	Fukomys_damarensis
ENSNBRG00000003253	rnaseh2b	100	81.373	ENSFHEG00000012160	rnaseh2b	100	81.373	Fundulus_heteroclitus
ENSNBRG00000003253	rnaseh2b	100	65.472	ENSGMOG00000016830	rnaseh2b	100	65.472	Gadus_morhua
ENSNBRG00000003253	rnaseh2b	95	57.483	ENSGALG00000017015	RNASEH2B	100	58.252	Gallus_gallus
ENSNBRG00000003253	rnaseh2b	100	80.719	ENSGAFG00000021222	rnaseh2b	100	80.719	Gambusia_affinis
ENSNBRG00000003253	rnaseh2b	100	76.923	ENSGACG00000002821	rnaseh2b	100	76.923	Gasterosteus_aculeatus
ENSNBRG00000003253	rnaseh2b	91	59.857	ENSGAGG00000014722	RNASEH2B	99	59.857	Gopherus_agassizii
ENSNBRG00000003253	rnaseh2b	89	49.817	ENSGGOG00000001044	RNASEH2B	87	50.368	Gorilla_gorilla
ENSNBRG00000003253	rnaseh2b	100	98.039	ENSHBUG00000006049	rnaseh2b	100	98.039	Haplochromis_burtoni
ENSNBRG00000003253	rnaseh2b	89	50.741	ENSHGLG00100015953	RNASEH2B	92	50.741	Heterocephalus_glaber_male
ENSNBRG00000003253	rnaseh2b	100	73.701	ENSHCOG00000003318	rnaseh2b	100	73.701	Hippocampus_comes
ENSNBRG00000003253	rnaseh2b	100	72.313	ENSIPUG00000023815	rnaseh2b	100	72.313	Ictalurus_punctatus
ENSNBRG00000003253	rnaseh2b	88	50.746	ENSSTOG00000015126	RNASEH2B	91	51.311	Ictidomys_tridecemlineatus
ENSNBRG00000003253	rnaseh2b	90	50.182	ENSJJAG00000013335	Rnaseh2b	93	50.182	Jaculus_jaculus
ENSNBRG00000003253	rnaseh2b	100	81.373	ENSKMAG00000002198	rnaseh2b	100	81.373	Kryptolebias_marmoratus
ENSNBRG00000003253	rnaseh2b	100	81.046	ENSLBEG00000019331	rnaseh2b	100	81.046	Labrus_bergylta
ENSNBRG00000003253	rnaseh2b	69	61.792	ENSLACG00000010782	RNASEH2B	92	62.281	Latimeria_chalumnae
ENSNBRG00000003253	rnaseh2b	100	68.404	ENSLOCG00000009296	rnaseh2b	100	68.404	Lepisosteus_oculatus
ENSNBRG00000003253	rnaseh2b	89	47.407	ENSLAFG00000030158	RNASEH2B	87	47.955	Loxodonta_africana
ENSNBRG00000003253	rnaseh2b	89	50.370	ENSMFAG00000038464	-	87	50.929	Macaca_fascicularis
ENSNBRG00000003253	rnaseh2b	89	46.296	ENSMMUG00000021746	RNASEH2B	86	46.296	Macaca_mulatta
ENSNBRG00000003253	rnaseh2b	89	50.370	ENSMNEG00000030580	RNASEH2B	87	50.929	Macaca_nemestrina
ENSNBRG00000003253	rnaseh2b	89	49.817	ENSMLEG00000043911	-	87	50.368	Mandrillus_leucophaeus
ENSNBRG00000003253	rnaseh2b	100	82.353	ENSMAMG00000017109	rnaseh2b	100	82.353	Mastacembelus_armatus
ENSNBRG00000003253	rnaseh2b	100	96.358	ENSMZEG00005021926	rnaseh2b	100	96.358	Maylandia_zebra
ENSNBRG00000003253	rnaseh2b	85	60.076	ENSMGAG00000015025	RNASEH2B	97	60.791	Meleagris_gallopavo
ENSNBRG00000003253	rnaseh2b	89	50.741	ENSMAUG00000016520	Rnaseh2b	88	51.111	Mesocricetus_auratus
ENSNBRG00000003253	rnaseh2b	89	49.630	ENSMICG00000000528	RNASEH2B	87	50.186	Microcebus_murinus
ENSNBRG00000003253	rnaseh2b	99	78.033	ENSMMOG00000019799	rnaseh2b	99	83.803	Mola_mola
ENSNBRG00000003253	rnaseh2b	98	53.465	ENSMODG00000010775	RNASEH2B	99	53.465	Monodelphis_domestica
ENSNBRG00000003253	rnaseh2b	99	81.311	ENSMALG00000004463	rnaseh2b	100	81.311	Monopterus_albus
ENSNBRG00000003253	rnaseh2b	73	54.054	MGP_CAROLIEiJ_G0019389	Rnaseh2b	85	54.310	Mus_caroli
ENSNBRG00000003253	rnaseh2b	89	51.481	ENSMUSG00000021932	Rnaseh2b	87	51.673	Mus_musculus
ENSNBRG00000003253	rnaseh2b	95	40.719	MGP_PahariEiJ_G0030407	-	95	40.719	Mus_pahari
ENSNBRG00000003253	rnaseh2b	70	45.024	ENSMPUG00000018010	RNASEH2B	88	45.714	Mustela_putorius_furo
ENSNBRG00000003253	rnaseh2b	89	51.471	ENSMLUG00000004065	-	87	52.030	Myotis_lucifugus
ENSNBRG00000003253	rnaseh2b	89	50.183	ENSNLEG00000003804	RNASEH2B	87	50.735	Nomascus_leucogenys
ENSNBRG00000003253	rnaseh2b	93	53.846	ENSMEUG00000003665	RNASEH2B	97	55.319	Notamacropus_eugenii
ENSNBRG00000003253	rnaseh2b	53	46.914	ENSOPRG00000003695	-	51	49.383	Ochotona_princeps
ENSNBRG00000003253	rnaseh2b	93	49.306	ENSODEG00000006793	-	93	49.306	Octodon_degus
ENSNBRG00000003253	rnaseh2b	77	44.915	ENSODEG00000005412	-	93	44.915	Octodon_degus
ENSNBRG00000003253	rnaseh2b	100	96.078	ENSONIG00000006657	rnaseh2b	100	96.078	Oreochromis_niloticus
ENSNBRG00000003253	rnaseh2b	90	56.383	ENSOANG00000015537	RNASEH2B	97	56.383	Ornithorhynchus_anatinus
ENSNBRG00000003253	rnaseh2b	94	45.704	ENSOCUG00000008904	RNASEH2B	91	46.735	Oryctolagus_cuniculus
ENSNBRG00000003253	rnaseh2b	99	79.139	ENSORLG00000011850	rnaseh2b	100	79.139	Oryzias_latipes
ENSNBRG00000003253	rnaseh2b	99	79.470	ENSORLG00020012081	rnaseh2b	100	79.470	Oryzias_latipes_hni
ENSNBRG00000003253	rnaseh2b	99	78.808	ENSORLG00015015468	rnaseh2b	100	78.808	Oryzias_latipes_hsok
ENSNBRG00000003253	rnaseh2b	99	79.801	ENSOMEG00000012441	rnaseh2b	100	79.801	Oryzias_melastigma
ENSNBRG00000003253	rnaseh2b	91	49.640	ENSOGAG00000016486	RNASEH2B	93	49.640	Otolemur_garnettii
ENSNBRG00000003253	rnaseh2b	90	49.458	ENSOARG00000008701	RNASEH2B	93	49.458	Ovis_aries
ENSNBRG00000003253	rnaseh2b	89	50.183	ENSPPAG00000026374	RNASEH2B	94	46.262	Pan_paniscus
ENSNBRG00000003253	rnaseh2b	89	47.810	ENSPPRG00000012450	RNASEH2B	89	48.352	Panthera_pardus
ENSNBRG00000003253	rnaseh2b	89	48.175	ENSPTIG00000013918	RNASEH2B	98	48.175	Panthera_tigris_altaica
ENSNBRG00000003253	rnaseh2b	89	50.183	ENSPTRG00000005886	RNASEH2B	95	53.226	Pan_troglodytes
ENSNBRG00000003253	rnaseh2b	89	49.817	ENSPANG00000022424	-	87	50.368	Papio_anubis
ENSNBRG00000003253	rnaseh2b	100	67.101	ENSPKIG00000013386	rnaseh2b	100	67.101	Paramormyrops_kingsleyae
ENSNBRG00000003253	rnaseh2b	60	55.135	ENSPSIG00000002224	RNASEH2B	86	55.135	Pelodiscus_sinensis
ENSNBRG00000003253	rnaseh2b	66	76.263	ENSPMGG00000010299	rnaseh2b	96	76.263	Periophthalmus_magnuspinnatus
ENSNBRG00000003253	rnaseh2b	89	51.852	ENSPEMG00000019721	Rnaseh2b	88	52.206	Peromyscus_maniculatus_bairdii
ENSNBRG00000003253	rnaseh2b	88	54.412	ENSPCIG00000014535	-	92	54.412	Phascolarctos_cinereus
ENSNBRG00000003253	rnaseh2b	100	78.896	ENSPFOG00000016722	rnaseh2b	100	78.896	Poecilia_formosa
ENSNBRG00000003253	rnaseh2b	100	79.085	ENSPLAG00000011755	rnaseh2b	100	79.085	Poecilia_latipinna
ENSNBRG00000003253	rnaseh2b	100	79.412	ENSPMEG00000002721	rnaseh2b	100	79.412	Poecilia_mexicana
ENSNBRG00000003253	rnaseh2b	100	79.739	ENSPREG00000007737	rnaseh2b	100	79.739	Poecilia_reticulata
ENSNBRG00000003253	rnaseh2b	89	50.183	ENSPPYG00000005378	RNASEH2B	87	50.735	Pongo_abelii
ENSNBRG00000003253	rnaseh2b	89	49.817	ENSPCOG00000026623	RNASEH2B	87	50.368	Propithecus_coquereli
ENSNBRG00000003253	rnaseh2b	77	47.679	ENSPVAG00000000508	RNASEH2B	89	48.305	Pteropus_vampyrus
ENSNBRG00000003253	rnaseh2b	100	97.712	ENSPNYG00000013552	rnaseh2b	100	97.712	Pundamilia_nyererei
ENSNBRG00000003253	rnaseh2b	99	69.281	ENSPNAG00000024825	rnaseh2b	99	69.281	Pygocentrus_nattereri
ENSNBRG00000003253	rnaseh2b	89	51.838	ENSRNOG00000009192	Rnaseh2b	88	51.838	Rattus_norvegicus
ENSNBRG00000003253	rnaseh2b	89	50.000	ENSRBIG00000028928	-	87	50.554	Rhinopithecus_bieti
ENSNBRG00000003253	rnaseh2b	87	43.774	ENSRBIG00000036017	-	86	44.318	Rhinopithecus_bieti
ENSNBRG00000003253	rnaseh2b	89	50.000	ENSRROG00000018808	-	87	50.554	Rhinopithecus_roxellana
ENSNBRG00000003253	rnaseh2b	70	38.785	ENSRROG00000044915	-	80	38.679	Rhinopithecus_roxellana
ENSNBRG00000003253	rnaseh2b	89	50.370	ENSSBOG00000008081	RNASEH2B	96	50.929	Saimiri_boliviensis_boliviensis
ENSNBRG00000003253	rnaseh2b	100	53.226	ENSSHAG00000016190	RNASEH2B	100	53.896	Sarcophilus_harrisii
ENSNBRG00000003253	rnaseh2b	99	68.954	ENSSFOG00015010190	rnaseh2b	100	68.954	Scleropages_formosus
ENSNBRG00000003253	rnaseh2b	100	80.065	ENSSMAG00000001546	rnaseh2b	100	80.065	Scophthalmus_maximus
ENSNBRG00000003253	rnaseh2b	100	83.660	ENSSDUG00000007567	rnaseh2b	100	83.660	Seriola_dumerili
ENSNBRG00000003253	rnaseh2b	100	81.063	ENSSLDG00000012485	rnaseh2b	100	81.063	Seriola_lalandi_dorsalis
ENSNBRG00000003253	rnaseh2b	88	56.343	ENSSPUG00000006745	-	96	56.343	Sphenodon_punctatus
ENSNBRG00000003253	rnaseh2b	100	83.987	ENSSPAG00000020926	rnaseh2b	100	83.987	Stegastes_partitus
ENSNBRG00000003253	rnaseh2b	89	49.815	ENSSSCG00000024385	RNASEH2B	95	52.846	Sus_scrofa
ENSNBRG00000003253	rnaseh2b	89	62.271	ENSTGUG00000012104	RNASEH2B	100	62.271	Taeniopygia_guttata
ENSNBRG00000003253	rnaseh2b	100	77.778	ENSTRUG00000015098	rnaseh2b	100	77.778	Takifugu_rubripes
ENSNBRG00000003253	rnaseh2b	100	75.974	ENSTNIG00000013861	rnaseh2b	100	75.974	Tetraodon_nigroviridis
ENSNBRG00000003253	rnaseh2b	88	42.066	ENSTTRG00000010761	RNASEH2B	88	43.173	Tursiops_truncatus
ENSNBRG00000003253	rnaseh2b	89	49.630	ENSUAMG00000022849	RNASEH2B	97	49.630	Ursus_americanus
ENSNBRG00000003253	rnaseh2b	89	49.259	ENSUMAG00000018556	RNASEH2B	97	49.259	Ursus_maritimus
ENSNBRG00000003253	rnaseh2b	88	49.814	ENSVPAG00000005679	RNASEH2B	93	50.373	Vicugna_pacos
ENSNBRG00000003253	rnaseh2b	89	48.889	ENSVVUG00000024015	RNASEH2B	81	50.000	Vulpes_vulpes
ENSNBRG00000003253	rnaseh2b	99	53.896	ENSXETG00000020720	rnaseh2b	100	53.896	Xenopus_tropicalis
ENSNBRG00000003253	rnaseh2b	100	78.502	ENSXCOG00000018732	rnaseh2b	100	78.502	Xiphophorus_couchianus
ENSNBRG00000003253	rnaseh2b	100	80.719	ENSXMAG00000022554	rnaseh2b	100	80.719	Xiphophorus_maculatus