EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003307 (Gene tree)
Gene ID: 102796397
Gene Symbol: mrpl42
Alias: -
Full Name: 39S ribosomal protein L42%2C mitochondrial-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3664 bases
Position: chrJH422274.1:5925722-5929385
Accession: 102796397
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004152	MRP-S32	PF10210.9	1.4e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004286	-	1052	XM_006780665	ENSNBRP00000004152	144 (aa)	XP_006780728	UPI0003EBC8B5

Gene Model

Click here to download ENSNBRG00000003307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003307's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003307	mrpl42	100	79.452	ENSAPOG00000010677	mrpl42	100	79.452	Acanthochromis_polyacanthus
ENSNBRG00000003307	mrpl42	100	80.000	ENSAOCG00000011620	mrpl42	100	80.000	Amphiprion_ocellaris
ENSNBRG00000003307	mrpl42	100	80.690	ENSAPEG00000019516	mrpl42	100	80.690	Amphiprion_percula
ENSNBRG00000003307	mrpl42	90	78.626	ENSATEG00000014106	mrpl42	100	78.626	Anabas_testudineus
ENSNBRG00000003307	mrpl42	100	53.103	ENSACAG00000012606	MRPL42	99	53.103	Anolis_carolinensis
ENSNBRG00000003307	mrpl42	100	96.528	ENSACLG00000026856	mrpl42	100	96.528	Astatotilapia_calliptera
ENSNBRG00000003307	mrpl42	85	45.736	ENSAMXG00000035149	mrpl42	94	45.736	Astyanax_mexicanus
ENSNBRG00000003307	mrpl42	99	64.336	ENSCSEG00000010067	mrpl42	98	64.336	Cynoglossus_semilaevis
ENSNBRG00000003307	mrpl42	100	73.103	ENSCVAG00000002612	mrpl42	100	73.103	Cyprinodon_variegatus
ENSNBRG00000003307	mrpl42	100	53.793	ENSDARG00000079391	mrpl42	100	53.793	Danio_rerio
ENSNBRG00000003307	mrpl42	78	43.697	ENSEBUG00000005581	mrpl42	88	43.697	Eptatretus_burgeri
ENSNBRG00000003307	mrpl42	99	59.722	ENSELUG00000001973	mrpl42	99	59.722	Esox_lucius
ENSNBRG00000003307	mrpl42	100	74.658	ENSFHEG00000018696	mrpl42	100	74.658	Fundulus_heteroclitus
ENSNBRG00000003307	mrpl42	67	78.351	ENSGMOG00000002972	mrpl42	100	78.351	Gadus_morhua
ENSNBRG00000003307	mrpl42	100	73.793	ENSGAFG00000018373	mrpl42	100	73.793	Gambusia_affinis
ENSNBRG00000003307	mrpl42	67	80.412	ENSGACG00000018811	mrpl42	100	80.412	Gasterosteus_aculeatus
ENSNBRG00000003307	mrpl42	100	96.528	ENSHBUG00000015960	mrpl42	100	96.528	Haplochromis_burtoni
ENSNBRG00000003307	mrpl42	100	64.384	ENSHCOG00000014046	mrpl42	100	64.384	Hippocampus_comes
ENSNBRG00000003307	mrpl42	83	52.419	ENSIPUG00000015395	mrpl42	84	52.419	Ictalurus_punctatus
ENSNBRG00000003307	mrpl42	100	68.276	ENSKMAG00000013671	mrpl42	100	68.276	Kryptolebias_marmoratus
ENSNBRG00000003307	mrpl42	100	68.966	ENSLBEG00000028618	mrpl42	99	68.966	Labrus_bergylta
ENSNBRG00000003307	mrpl42	100	74.483	ENSMAMG00000009737	mrpl42	100	74.483	Mastacembelus_armatus
ENSNBRG00000003307	mrpl42	100	96.528	ENSMZEG00005008545	mrpl42	96	96.528	Maylandia_zebra
ENSNBRG00000003307	mrpl42	74	72.897	ENSMMOG00000002317	mrpl42	70	72.897	Mola_mola
ENSNBRG00000003307	mrpl42	100	65.806	ENSMALG00000015794	mrpl42	96	65.806	Monopterus_albus
ENSNBRG00000003307	mrpl42	100	96.528	ENSONIG00000011753	mrpl42	100	96.528	Oreochromis_niloticus
ENSNBRG00000003307	mrpl42	93	48.148	ENSOANG00000019984	-	92	48.148	Ornithorhynchus_anatinus
ENSNBRG00000003307	mrpl42	100	68.276	ENSORLG00000013500	mrpl42	85	68.276	Oryzias_latipes
ENSNBRG00000003307	mrpl42	100	70.345	ENSORLG00020000548	mrpl42	100	70.345	Oryzias_latipes_hni
ENSNBRG00000003307	mrpl42	100	68.750	ENSORLG00015016984	mrpl42	100	68.750	Oryzias_latipes_hsok
ENSNBRG00000003307	mrpl42	100	70.345	ENSOMEG00000010700	mrpl42	100	70.345	Oryzias_melastigma
ENSNBRG00000003307	mrpl42	100	58.784	ENSPKIG00000025457	mrpl42	100	58.784	Paramormyrops_kingsleyae
ENSNBRG00000003307	mrpl42	69	74.257	ENSPMGG00000019705	mrpl42	71	74.257	Periophthalmus_magnuspinnatus
ENSNBRG00000003307	mrpl42	70	52.381	ENSPMAG00000008091	mrpl42	68	52.381	Petromyzon_marinus
ENSNBRG00000003307	mrpl42	100	73.793	ENSPFOG00000016539	mrpl42	99	73.793	Poecilia_formosa
ENSNBRG00000003307	mrpl42	100	73.103	ENSPLAG00000001255	mrpl42	100	73.103	Poecilia_latipinna
ENSNBRG00000003307	mrpl42	100	73.793	ENSPMEG00000016462	mrpl42	100	73.793	Poecilia_mexicana
ENSNBRG00000003307	mrpl42	92	65.672	ENSPREG00000012053	mrpl42	96	65.672	Poecilia_reticulata
ENSNBRG00000003307	mrpl42	100	96.528	ENSPNYG00000009586	mrpl42	100	96.528	Pundamilia_nyererei
ENSNBRG00000003307	mrpl42	98	50.704	ENSPNAG00000020753	mrpl42	97	50.704	Pygocentrus_nattereri
ENSNBRG00000003307	mrpl42	100	73.793	ENSSMAG00000000262	mrpl42	100	73.793	Scophthalmus_maximus
ENSNBRG00000003307	mrpl42	100	77.241	ENSSDUG00000005949	mrpl42	100	77.241	Seriola_dumerili
ENSNBRG00000003307	mrpl42	100	77.241	ENSSLDG00000010159	mrpl42	100	77.241	Seriola_lalandi_dorsalis
ENSNBRG00000003307	mrpl42	100	71.724	ENSTRUG00000025949	mrpl42	99	71.724	Takifugu_rubripes
ENSNBRG00000003307	mrpl42	75	56.481	ENSXETG00000032902	mrpl42	88	56.481	Xenopus_tropicalis
ENSNBRG00000003307	mrpl42	100	65.753	ENSXCOG00000013875	mrpl42	98	65.753	Xiphophorus_couchianus