EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003346 (Gene tree)
Gene ID: 102788763
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding protein fox-1 homolog 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 12043 bases
Position: chrJH422369.1:2285924-2297966
Accession: 102788763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004314	Fox-1_C	PF12414.8	7.3e-33	1	1
ENSNBRP00000004314	RRM_1	PF00076.22	8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004451	-	1134	XM_006802968	ENSNBRP00000004314	377 (aa)	XP_006803031	-

Gene Model

Click here to download ENSNBRG00000003346's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003346's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003346	rbfox1l	85	52.147	ENSNBRG00000022885	-	60	65.198
ENSNBRG00000003346	rbfox1l	97	46.561	ENSNBRG00000010102	rbfox3b	59	72.197
ENSNBRG00000003346	rbfox1l	91	41.787	ENSNBRG00000011084	rbfox1	67	51.064
ENSNBRG00000003346	rbfox1l	62	62.403	ENSNBRG00000018155	rbfox2	68	56.270

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003346	rbfox1l	97	88.140	ENSAPOG00000016304	rbfox1l	98	88.949	Acanthochromis_polyacanthus
ENSNBRG00000003346	rbfox1l	100	88.095	ENSACIG00000006441	rbfox1l	100	88.095	Amphilophus_citrinellus
ENSNBRG00000003346	rbfox1l	83	83.648	ENSAOCG00000020938	rbfox1l	94	81.562	Amphiprion_ocellaris
ENSNBRG00000003346	rbfox1l	100	88.512	ENSAPEG00000008232	rbfox1l	100	89.295	Amphiprion_percula
ENSNBRG00000003346	rbfox1l	100	86.842	ENSATEG00000022649	rbfox1l	100	86.842	Anabas_testudineus
ENSNBRG00000003346	rbfox1l	64	72.984	ENSACAG00000011931	-	89	74.486	Anolis_carolinensis
ENSNBRG00000003346	rbfox1l	100	98.421	ENSACLG00000021394	rbfox1l	100	98.421	Astatotilapia_calliptera
ENSNBRG00000003346	rbfox1l	100	86.423	ENSAMXG00000010470	rbfox1l	100	86.423	Astyanax_mexicanus
ENSNBRG00000003346	rbfox1l	100	54.103	ENSCPBG00000010944	-	100	55.784	Chrysemys_picta_bellii
ENSNBRG00000003346	rbfox1l	100	87.664	ENSCSEG00000018898	rbfox1l	100	87.927	Cynoglossus_semilaevis
ENSNBRG00000003346	rbfox1l	100	87.728	ENSCVAG00000007986	rbfox1l	100	87.206	Cyprinodon_variegatus
ENSNBRG00000003346	rbfox1l	100	84.856	ENSDARG00000021184	rbfox1l	100	85.117	Danio_rerio
ENSNBRG00000003346	rbfox1l	100	81.102	ENSELUG00000015077	rbfox1l	100	82.443	Esox_lucius
ENSNBRG00000003346	rbfox1l	79	85.366	ENSFHEG00000016557	rbfox1l	95	85.366	Fundulus_heteroclitus
ENSNBRG00000003346	rbfox1l	100	82.507	ENSGMOG00000005040	rbfox1l	100	82.507	Gadus_morhua
ENSNBRG00000003346	rbfox1l	92	86.723	ENSGAFG00000013211	rbfox1l	97	86.723	Gambusia_affinis
ENSNBRG00000003346	rbfox1l	100	87.728	ENSGACG00000010757	rbfox1l	100	87.728	Gasterosteus_aculeatus
ENSNBRG00000003346	rbfox1l	65	68.548	ENSGAGG00000012440	-	84	72.385	Gopherus_agassizii
ENSNBRG00000003346	rbfox1l	100	98.421	ENSHBUG00000013406	rbfox1l	100	98.421	Haplochromis_burtoni
ENSNBRG00000003346	rbfox1l	100	83.854	ENSHCOG00000020771	rbfox1l	100	84.115	Hippocampus_comes
ENSNBRG00000003346	rbfox1l	99	78.515	ENSIPUG00000000065	rbfox1l	99	79.887	Ictalurus_punctatus
ENSNBRG00000003346	rbfox1l	100	86.494	ENSKMAG00000005146	rbfox1l	100	86.753	Kryptolebias_marmoratus
ENSNBRG00000003346	rbfox1l	100	89.556	ENSLBEG00000017089	rbfox1l	100	89.556	Labrus_bergylta
ENSNBRG00000003346	rbfox1l	100	89.034	ENSMAMG00000019480	rbfox1l	100	89.034	Mastacembelus_armatus
ENSNBRG00000003346	rbfox1l	100	98.421	ENSMZEG00005016374	rbfox1l	100	98.421	Maylandia_zebra
ENSNBRG00000003346	rbfox1l	100	89.737	ENSMMOG00000016530	rbfox1l	100	89.737	Mola_mola
ENSNBRG00000003346	rbfox1l	100	86.316	ENSMALG00000009384	rbfox1l	100	86.316	Monopterus_albus
ENSNBRG00000003346	rbfox1l	100	98.158	ENSONIG00000012754	rbfox1l	100	98.158	Oreochromis_niloticus
ENSNBRG00000003346	rbfox1l	100	87.990	ENSORLG00000011269	rbfox1l	100	88.773	Oryzias_latipes
ENSNBRG00000003346	rbfox1l	100	88.773	ENSORLG00020000162	rbfox1l	100	89.556	Oryzias_latipes_hni
ENSNBRG00000003346	rbfox1l	100	88.512	ENSORLG00015013464	rbfox1l	100	89.295	Oryzias_latipes_hsok
ENSNBRG00000003346	rbfox1l	100	88.512	ENSOMEG00000010584	rbfox1l	100	89.295	Oryzias_melastigma
ENSNBRG00000003346	rbfox1l	100	87.927	ENSPKIG00000012029	rbfox1l	100	87.927	Paramormyrops_kingsleyae
ENSNBRG00000003346	rbfox1l	100	80.840	ENSPMGG00000012082	rbfox1l	100	80.315	Periophthalmus_magnuspinnatus
ENSNBRG00000003346	rbfox1l	100	87.467	ENSPFOG00000009338	rbfox1l	100	87.467	Poecilia_formosa
ENSNBRG00000003346	rbfox1l	85	78.593	ENSPLAG00000012816	rbfox1l	99	78.593	Poecilia_latipinna
ENSNBRG00000003346	rbfox1l	100	83.551	ENSPMEG00000017597	rbfox1l	100	83.551	Poecilia_mexicana
ENSNBRG00000003346	rbfox1l	100	83.551	ENSPREG00000007940	rbfox1l	100	83.551	Poecilia_reticulata
ENSNBRG00000003346	rbfox1l	100	98.158	ENSPNYG00000002098	rbfox1l	100	98.158	Pundamilia_nyererei
ENSNBRG00000003346	rbfox1l	100	83.594	ENSPNAG00000001620	rbfox1l	100	83.594	Pygocentrus_nattereri
ENSNBRG00000003346	rbfox1l	100	84.031	ENSSFOG00015000675	rbfox1l	100	84.293	Scleropages_formosus
ENSNBRG00000003346	rbfox1l	100	86.945	ENSSMAG00000013090	rbfox1l	100	86.945	Scophthalmus_maximus
ENSNBRG00000003346	rbfox1l	100	88.342	ENSSDUG00000008705	rbfox1l	100	88.083	Seriola_dumerili
ENSNBRG00000003346	rbfox1l	100	88.312	ENSSLDG00000022256	rbfox1l	100	88.052	Seriola_lalandi_dorsalis
ENSNBRG00000003346	rbfox1l	100	89.556	ENSSPAG00000016620	rbfox1l	100	90.339	Stegastes_partitus
ENSNBRG00000003346	rbfox1l	96	84.741	ENSTRUG00000015905	rbfox1l	100	85.014	Takifugu_rubripes
ENSNBRG00000003346	rbfox1l	64	81.955	ENSTNIG00000008088	rbfox1l	97	84.170	Tetraodon_nigroviridis
ENSNBRG00000003346	rbfox1l	100	87.467	ENSXMAG00000023471	rbfox1l	100	87.467	Xiphophorus_maculatus