EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003429 (Gene tree)
Gene ID: 102790332
Gene Symbol: -
Alias: -
Full Name: probable threonine--tRNA ligase 2%2C cytoplasmic-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 14613 bases
Position: chrJH422404.1:546586-561198
Accession: 102790332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004302	HGTP_anticodon	PF03129.20	3.3e-18	1	1
ENSNBRP00000004302	tRNA-synt_2b	PF00587.25	5.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004439	-	2225	XM_006804846	ENSNBRP00000004302	684 (aa)	XP_006804909	UPI0003EC4BD6

Gene Model

Click here to download ENSNBRG00000003429's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003429's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003429	-	52	45.055	ENSNBRG00000008049	-	76	45.055
ENSNBRG00000003429	-	96	52.861	ENSNBRG00000022198	tars	92	52.861

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003429	-	96	54.273	ENSG00000185418	TARSL2	99	49.315	Homo_sapiens
ENSNBRG00000003429	-	62	80.706	ENSAPOG00000015706	-	100	80.706	Acanthochromis_polyacanthus
ENSNBRG00000003429	-	96	53.471	ENSAMEG00000003074	TARSL2	86	53.471	Ailuropoda_melanoleuca
ENSNBRG00000003429	-	65	95.475	ENSACIG00000007759	-	95	95.475	Amphilophus_citrinellus
ENSNBRG00000003429	-	63	86.449	ENSAOCG00000012359	-	99	86.449	Amphiprion_ocellaris
ENSNBRG00000003429	-	62	82.824	ENSAPEG00000007512	-	100	82.824	Amphiprion_percula
ENSNBRG00000003429	-	97	86.767	ENSATEG00000023568	-	96	86.767	Anabas_testudineus
ENSNBRG00000003429	-	96	53.582	ENSAPLG00000008485	TARSL2	93	53.662	Anas_platyrhynchos
ENSNBRG00000003429	-	78	53.247	ENSACAG00000000199	TARSL2	77	53.247	Anolis_carolinensis
ENSNBRG00000003429	-	96	52.749	ENSACAG00000003076	-	99	52.749	Anolis_carolinensis
ENSNBRG00000003429	-	96	50.825	ENSANAG00000020687	TARSL2	85	51.741	Aotus_nancymaae
ENSNBRG00000003429	-	97	99.249	ENSACLG00000020262	-	96	99.249	Astatotilapia_calliptera
ENSNBRG00000003429	-	97	74.063	ENSAMXG00000012533	-	96	74.063	Astyanax_mexicanus
ENSNBRG00000003429	-	96	51.846	ENSBTAG00000007651	TARSL2	84	51.846	Bos_taurus
ENSNBRG00000003429	-	97	62.814	ENSCJAG00000017350	TARSL2	77	62.814	Callithrix_jacchus
ENSNBRG00000003429	-	96	53.858	ENSCAFG00000010453	TARSL2	83	53.107	Canis_familiaris
ENSNBRG00000003429	-	99	51.585	ENSCAFG00020020868	TARSL2	97	55.980	Canis_lupus_dingo
ENSNBRG00000003429	-	85	52.246	ENSCHIG00000015264	TARSL2	82	52.246	Capra_hircus
ENSNBRG00000003429	-	96	52.252	ENSTSYG00000004538	TARSL2	95	52.252	Carlito_syrichta
ENSNBRG00000003429	-	90	48.000	ENSCAPG00000004815	TARSL2	93	48.000	Cavia_aperea
ENSNBRG00000003429	-	96	53.153	ENSCPOG00000008850	TARSL2	95	53.153	Cavia_porcellus
ENSNBRG00000003429	-	96	53.973	ENSCCAG00000030068	TARSL2	81	55.360	Cebus_capucinus
ENSNBRG00000003429	-	96	53.502	ENSCATG00000037383	TARSL2	86	53.502	Cercocebus_atys
ENSNBRG00000003429	-	96	53.153	ENSCLAG00000016873	TARSL2	87	53.153	Chinchilla_lanigera
ENSNBRG00000003429	-	96	53.502	ENSCSAG00000016828	TARSL2	83	53.502	Chlorocebus_sabaeus
ENSNBRG00000003429	-	90	52.773	ENSCHOG00000001319	TARSL2	96	52.773	Choloepus_hoffmanni
ENSNBRG00000003429	-	96	53.614	ENSCPBG00000010792	TARSL2	84	53.614	Chrysemys_picta_bellii
ENSNBRG00000003429	-	96	53.651	ENSCANG00000035438	TARSL2	94	53.651	Colobus_angolensis_palliatus
ENSNBRG00000003429	-	96	53.443	ENSCGRG00001020827	Tarsl2	84	53.443	Cricetulus_griseus_chok1gshd
ENSNBRG00000003429	-	96	53.443	ENSCGRG00000011398	Tarsl2	93	53.443	Cricetulus_griseus_crigri
ENSNBRG00000003429	-	97	81.448	ENSCSEG00000002562	-	99	86.620	Cynoglossus_semilaevis
ENSNBRG00000003429	-	63	90.487	ENSCVAG00000009253	-	100	90.487	Cyprinodon_variegatus
ENSNBRG00000003429	-	62	78.622	ENSDARG00000075385	LO017852.1	99	78.622	Danio_rerio
ENSNBRG00000003429	-	96	51.946	ENSDNOG00000046161	TARSL2	95	51.946	Dasypus_novemcinctus
ENSNBRG00000003429	-	96	53.544	ENSDORG00000009653	Tarsl2	95	53.544	Dipodomys_ordii
ENSNBRG00000003429	-	96	53.323	ENSEASG00005017718	TARSL2	84	53.323	Equus_asinus_asinus
ENSNBRG00000003429	-	96	53.323	ENSECAG00000024315	TARSL2	84	53.323	Equus_caballus
ENSNBRG00000003429	-	87	55.333	ENSEEUG00000014117	TARSL2	98	55.333	Erinaceus_europaeus
ENSNBRG00000003429	-	97	78.163	ENSELUG00000013552	-	96	78.163	Esox_lucius
ENSNBRG00000003429	-	96	53.651	ENSFCAG00000008836	TARSL2	83	54.849	Felis_catus
ENSNBRG00000003429	-	96	54.600	ENSFALG00000012444	TARSL2	89	54.600	Ficedula_albicollis
ENSNBRG00000003429	-	97	50.673	ENSFDAG00000002767	TARSL2	95	50.673	Fukomys_damarensis
ENSNBRG00000003429	-	65	90.519	ENSFHEG00000021877	-	81	90.519	Fundulus_heteroclitus
ENSNBRG00000003429	-	97	78.176	ENSGMOG00000006184	-	96	78.176	Gadus_morhua
ENSNBRG00000003429	-	98	53.028	ENSGALG00000043416	-	91	63.959	Gallus_gallus
ENSNBRG00000003429	-	96	53.846	ENSGALG00000003985	TARSL2	84	53.846	Gallus_gallus
ENSNBRG00000003429	-	97	84.314	ENSGAFG00000012691	-	96	84.314	Gambusia_affinis
ENSNBRG00000003429	-	97	86.145	ENSGACG00000011734	-	97	86.015	Gasterosteus_aculeatus
ENSNBRG00000003429	-	96	53.313	ENSGAGG00000010775	TARSL2	84	53.313	Gopherus_agassizii
ENSNBRG00000003429	-	96	54.123	ENSGGOG00000007839	TARSL2	86	54.123	Gorilla_gorilla
ENSNBRG00000003429	-	100	99.561	ENSHBUG00000003411	-	100	99.561	Haplochromis_burtoni
ENSNBRG00000003429	-	96	52.632	ENSHGLG00000011618	TARSL2	85	52.632	Heterocephalus_glaber_female
ENSNBRG00000003429	-	96	52.632	ENSHGLG00100016769	TARSL2	95	52.632	Heterocephalus_glaber_male
ENSNBRG00000003429	-	97	79.279	ENSHCOG00000014119	-	95	79.279	Hippocampus_comes
ENSNBRG00000003429	-	62	74.353	ENSIPUG00000000099	-	100	74.353	Ictalurus_punctatus
ENSNBRG00000003429	-	96	53.604	ENSSTOG00000032725	TARSL2	84	53.604	Ictidomys_tridecemlineatus
ENSNBRG00000003429	-	100	85.526	ENSKMAG00000001354	-	98	85.526	Kryptolebias_marmoratus
ENSNBRG00000003429	-	62	87.059	ENSLBEG00000026238	-	100	87.059	Labrus_bergylta
ENSNBRG00000003429	-	96	53.453	ENSLAFG00000011941	TARSL2	98	53.453	Loxodonta_africana
ENSNBRG00000003429	-	96	53.353	ENSMFAG00000001902	TARSL2	84	53.353	Macaca_fascicularis
ENSNBRG00000003429	-	96	53.502	ENSMMUG00000000278	TARSL2	84	53.502	Macaca_mulatta
ENSNBRG00000003429	-	96	53.353	ENSMNEG00000034952	TARSL2	84	53.353	Macaca_nemestrina
ENSNBRG00000003429	-	96	53.353	ENSMLEG00000035535	TARSL2	95	53.353	Mandrillus_leucophaeus
ENSNBRG00000003429	-	97	86.787	ENSMAMG00000015032	-	96	86.787	Mastacembelus_armatus
ENSNBRG00000003429	-	97	99.249	ENSMZEG00005015989	-	96	99.249	Maylandia_zebra
ENSNBRG00000003429	-	87	62.428	ENSMGAG00000004951	TARSL2	95	62.428	Meleagris_gallopavo
ENSNBRG00000003429	-	87	61.942	ENSMAUG00000015756	Tarsl2	82	61.942	Mesocricetus_auratus
ENSNBRG00000003429	-	96	53.303	ENSMICG00000013039	TARSL2	97	53.303	Microcebus_murinus
ENSNBRG00000003429	-	96	53.383	ENSMOCG00000014909	Tarsl2	84	53.383	Microtus_ochrogaster
ENSNBRG00000003429	-	64	87.472	ENSMMOG00000016135	-	100	87.472	Mola_mola
ENSNBRG00000003429	-	96	52.410	ENSMODG00000011941	TARSL2	83	52.410	Monodelphis_domestica
ENSNBRG00000003429	-	96	84.674	ENSMALG00000007340	-	94	84.674	Monopterus_albus
ENSNBRG00000003429	-	96	53.233	MGP_CAROLIEiJ_G0029834	Tarsl2	84	53.233	Mus_caroli
ENSNBRG00000003429	-	96	53.083	ENSMUSG00000030515	Tarsl2	84	53.083	Mus_musculus
ENSNBRG00000003429	-	96	52.782	MGP_PahariEiJ_G0013059	Tarsl2	84	52.782	Mus_pahari
ENSNBRG00000003429	-	97	54.038	ENSMPUG00000011032	TARSL2	87	54.038	Mustela_putorius_furo
ENSNBRG00000003429	-	81	53.345	ENSMLUG00000024482	-	95	53.345	Myotis_lucifugus
ENSNBRG00000003429	-	96	52.252	ENSMLUG00000012870	-	83	52.252	Myotis_lucifugus
ENSNBRG00000003429	-	96	52.232	ENSNGAG00000020451	Tarsl2	84	52.232	Nannospalax_galili
ENSNBRG00000003429	-	96	53.343	ENSNLEG00000000541	TARSL2	85	53.343	Nomascus_leucogenys
ENSNBRG00000003429	-	82	49.823	ENSMEUG00000002935	TARSL2	70	49.823	Notamacropus_eugenii
ENSNBRG00000003429	-	72	46.092	ENSOPRG00000002689	-	62	46.092	Ochotona_princeps
ENSNBRG00000003429	-	96	53.233	ENSODEG00000014454	TARSL2	84	53.233	Octodon_degus
ENSNBRG00000003429	-	97	97.451	ENSONIG00000006402	-	99	97.451	Oreochromis_niloticus
ENSNBRG00000003429	-	96	52.266	ENSOANG00000013263	TARSL2	98	52.266	Ornithorhynchus_anatinus
ENSNBRG00000003429	-	96	53.153	ENSOCUG00000010740	TARSL2	93	53.153	Oryctolagus_cuniculus
ENSNBRG00000003429	-	99	81.406	ENSORLG00000010391	-	98	81.406	Oryzias_latipes
ENSNBRG00000003429	-	97	83.459	ENSORLG00020008928	-	97	83.459	Oryzias_latipes_hni
ENSNBRG00000003429	-	97	83.459	ENSORLG00015014897	-	97	83.459	Oryzias_latipes_hsok
ENSNBRG00000003429	-	97	84.384	ENSOMEG00000009022	-	97	84.384	Oryzias_melastigma
ENSNBRG00000003429	-	96	52.711	ENSOGAG00000014311	TARSL2	82	52.711	Otolemur_garnettii
ENSNBRG00000003429	-	96	52.142	ENSOARG00000016573	TARSL2	95	52.142	Ovis_aries
ENSNBRG00000003429	-	96	53.973	ENSPPAG00000040066	TARSL2	96	53.973	Pan_paniscus
ENSNBRG00000003429	-	96	53.353	ENSPPRG00000017275	TARSL2	83	54.531	Panthera_pardus
ENSNBRG00000003429	-	96	53.353	ENSPTIG00000015184	TARSL2	84	53.353	Panthera_tigris_altaica
ENSNBRG00000003429	-	96	54.123	ENSPTRG00000007516	TARSL2	83	54.123	Pan_troglodytes
ENSNBRG00000003429	-	96	51.613	ENSPANG00000022401	TARSL2	84	51.613	Papio_anubis
ENSNBRG00000003429	-	97	69.115	ENSPKIG00000010658	-	99	76.596	Paramormyrops_kingsleyae
ENSNBRG00000003429	-	83	55.575	ENSPSIG00000008419	TARSL2	99	55.575	Pelodiscus_sinensis
ENSNBRG00000003429	-	63	85.714	ENSPMGG00000007785	-	99	85.714	Periophthalmus_magnuspinnatus
ENSNBRG00000003429	-	96	52.481	ENSPEMG00000019852	Tarsl2	90	52.481	Peromyscus_maniculatus_bairdii
ENSNBRG00000003429	-	96	52.861	ENSPCIG00000022481	TARSL2	82	52.861	Phascolarctos_cinereus
ENSNBRG00000003429	-	96	84.962	ENSPFOG00000013444	-	100	84.962	Poecilia_formosa
ENSNBRG00000003429	-	97	85.219	ENSPLAG00000018145	-	96	85.219	Poecilia_latipinna
ENSNBRG00000003429	-	97	85.822	ENSPMEG00000023625	-	96	85.822	Poecilia_mexicana
ENSNBRG00000003429	-	62	88.235	ENSPREG00000017312	-	100	88.235	Poecilia_reticulata
ENSNBRG00000003429	-	85	62.162	ENSPPYG00000006830	TARSL2	81	62.162	Pongo_abelii
ENSNBRG00000003429	-	88	51.244	ENSPCAG00000011132	TARSL2	75	51.244	Procavia_capensis
ENSNBRG00000003429	-	89	62.857	ENSPCOG00000026095	TARSL2	81	62.857	Propithecus_coquereli
ENSNBRG00000003429	-	88	52.368	ENSPVAG00000012240	TARSL2	77	52.368	Pteropus_vampyrus
ENSNBRG00000003429	-	97	99.399	ENSPNYG00000004232	-	96	99.399	Pundamilia_nyererei
ENSNBRG00000003429	-	97	73.273	ENSPNAG00000002308	-	96	73.273	Pygocentrus_nattereri
ENSNBRG00000003429	-	60	47.867	ENSRNOG00000024460	Tarsl2	76	47.867	Rattus_norvegicus
ENSNBRG00000003429	-	96	53.800	ENSRBIG00000035707	TARSL2	86	53.800	Rhinopithecus_bieti
ENSNBRG00000003429	-	96	53.651	ENSRROG00000029492	TARSL2	86	53.651	Rhinopithecus_roxellana
ENSNBRG00000003429	-	96	53.673	ENSSBOG00000029807	TARSL2	97	53.412	Saimiri_boliviensis_boliviensis
ENSNBRG00000003429	-	96	53.233	ENSSHAG00000010266	TARSL2	88	53.233	Sarcophilus_harrisii
ENSNBRG00000003429	-	99	69.152	ENSSFOG00015022086	tars2	99	69.152	Scleropages_formosus
ENSNBRG00000003429	-	98	85.438	ENSSMAG00000015682	-	100	85.547	Scophthalmus_maximus
ENSNBRG00000003429	-	63	90.972	ENSSDUG00000007180	-	99	90.972	Seriola_dumerili
ENSNBRG00000003429	-	62	92.019	ENSSLDG00000015367	-	99	92.019	Seriola_lalandi_dorsalis
ENSNBRG00000003429	-	59	67.160	ENSSPUG00000001523	TARSL2	98	65.094	Sphenodon_punctatus
ENSNBRG00000003429	-	97	81.805	ENSSPAG00000018887	-	97	81.805	Stegastes_partitus
ENSNBRG00000003429	-	93	52.411	ENSSSCG00000005781	TARSL2	98	51.662	Sus_scrofa
ENSNBRG00000003429	-	62	60.656	ENSTGUG00000004602	-	98	60.656	Taeniopygia_guttata
ENSNBRG00000003429	-	96	53.846	ENSTGUG00000005726	TARSL2	98	53.846	Taeniopygia_guttata
ENSNBRG00000003429	-	62	90.141	ENSTRUG00000015004	-	99	90.141	Takifugu_rubripes
ENSNBRG00000003429	-	99	75.393	ENSTNIG00000008060	-	98	75.107	Tetraodon_nigroviridis
ENSNBRG00000003429	-	71	59.155	ENSTBEG00000001134	-	73	59.155	Tupaia_belangeri
ENSNBRG00000003429	-	96	51.846	ENSTTRG00000016207	TARSL2	96	51.846	Tursiops_truncatus
ENSNBRG00000003429	-	97	53.314	ENSUMAG00000024371	TARSL2	99	57.092	Ursus_maritimus
ENSNBRG00000003429	-	99	51.873	ENSVVUG00000014742	TARSL2	98	52.092	Vulpes_vulpes
ENSNBRG00000003429	-	68	86.853	ENSXCOG00000019508	-	93	90.250	Xiphophorus_couchianus
ENSNBRG00000003429	-	97	84.615	ENSXMAG00000016382	-	96	84.615	Xiphophorus_maculatus