EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003707 (Gene tree)
Gene ID: 102793222
Gene Symbol: polr3c
Alias: zgc:56348
Full Name: DNA-directed RNA polymerase III subunit RPC3-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Minus strand
Length: 4928 bases
Position: chrJH422404.1:729855-734782
Accession: 102793222
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004689	RNA_pol_Rpc82	PF05645.13	6.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004830	-	1644	XM_006804856	ENSNBRP00000004689	547 (aa)	XP_006804919	UPI0003EBDB31

Gene Model

Click here to download ENSNBRG00000003707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003707's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003707	polr3c	99	64.351	ENSG00000186141	POLR3C	99	64.182	Homo_sapiens
ENSNBRG00000003707	polr3c	100	88.525	ENSAPOG00000008722	polr3c	99	88.665	Acanthochromis_polyacanthus
ENSNBRG00000003707	polr3c	99	64.351	ENSAMEG00000017531	POLR3C	99	64.364	Ailuropoda_melanoleuca
ENSNBRG00000003707	polr3c	99	93.613	ENSACIG00000008064	polr3c	100	93.613	Amphilophus_citrinellus
ENSNBRG00000003707	polr3c	100	87.751	ENSAOCG00000011695	polr3c	99	88.342	Amphiprion_ocellaris
ENSNBRG00000003707	polr3c	100	87.751	ENSAPEG00000004426	polr3c	99	88.342	Amphiprion_percula
ENSNBRG00000003707	polr3c	100	86.654	ENSATEG00000023618	polr3c	92	86.654	Anabas_testudineus
ENSNBRG00000003707	polr3c	99	64.534	ENSANAG00000036434	POLR3C	99	64.364	Aotus_nancymaae
ENSNBRG00000003707	polr3c	100	99.452	ENSACLG00000019970	polr3c	100	99.452	Astatotilapia_calliptera
ENSNBRG00000003707	polr3c	99	74.040	ENSAMXG00000008273	polr3c	99	74.317	Astyanax_mexicanus
ENSNBRG00000003707	polr3c	99	65.091	ENSBTAG00000021637	POLR3C	99	65.091	Bos_taurus
ENSNBRG00000003707	polr3c	99	64.351	ENSCJAG00000002314	POLR3C	99	64.182	Callithrix_jacchus
ENSNBRG00000003707	polr3c	99	64.534	ENSCAFG00000011257	POLR3C	99	63.818	Canis_familiaris
ENSNBRG00000003707	polr3c	95	63.810	ENSCAFG00020020066	POLR3C	99	63.068	Canis_lupus_dingo
ENSNBRG00000003707	polr3c	99	65.082	ENSCHIG00000022431	POLR3C	99	64.727	Capra_hircus
ENSNBRG00000003707	polr3c	99	64.168	ENSTSYG00000002292	POLR3C	99	63.818	Carlito_syrichta
ENSNBRG00000003707	polr3c	95	50.000	ENSCAPG00000011559	POLR3C	100	49.526	Cavia_aperea
ENSNBRG00000003707	polr3c	99	63.620	ENSCPOG00000004654	POLR3C	99	63.091	Cavia_porcellus
ENSNBRG00000003707	polr3c	99	64.717	ENSCCAG00000027077	POLR3C	99	64.364	Cebus_capucinus
ENSNBRG00000003707	polr3c	99	64.168	ENSCATG00000040166	POLR3C	99	64.000	Cercocebus_atys
ENSNBRG00000003707	polr3c	88	74.694	ENSCLAG00000001652	POLR3C	99	74.694	Chinchilla_lanigera
ENSNBRG00000003707	polr3c	99	64.534	ENSCSAG00000001762	POLR3C	99	64.364	Chlorocebus_sabaeus
ENSNBRG00000003707	polr3c	99	62.340	ENSCHOG00000006911	POLR3C	99	62.000	Choloepus_hoffmanni
ENSNBRG00000003707	polr3c	99	64.717	ENSCPBG00000007883	POLR3C	99	64.545	Chrysemys_picta_bellii
ENSNBRG00000003707	polr3c	99	41.198	ENSCING00000007024	-	100	41.379	Ciona_intestinalis
ENSNBRG00000003707	polr3c	99	42.960	ENSCSAVG00000008586	-	99	42.162	Ciona_savignyi
ENSNBRG00000003707	polr3c	99	64.351	ENSCANG00000032538	POLR3C	99	64.182	Colobus_angolensis_palliatus
ENSNBRG00000003707	polr3c	99	63.919	ENSCGRG00001005471	Polr3c	99	63.752	Cricetulus_griseus_chok1gshd
ENSNBRG00000003707	polr3c	99	63.919	ENSCGRG00000016787	Polr3c	99	63.752	Cricetulus_griseus_crigri
ENSNBRG00000003707	polr3c	99	85.083	ENSCSEG00000002425	polr3c	98	85.083	Cynoglossus_semilaevis
ENSNBRG00000003707	polr3c	99	85.714	ENSCVAG00000009443	polr3c	100	85.714	Cyprinodon_variegatus
ENSNBRG00000003707	polr3c	99	85.714	ENSCVAG00000022458	polr3c	100	85.714	Cyprinodon_variegatus
ENSNBRG00000003707	polr3c	99	77.879	ENSDARG00000057562	polr3c	99	77.331	Danio_rerio
ENSNBRG00000003707	polr3c	71	66.497	ENSDNOG00000012149	POLR3C	99	66.247	Dasypus_novemcinctus
ENSNBRG00000003707	polr3c	99	63.934	ENSDORG00000013430	Polr3c	99	63.934	Dipodomys_ordii
ENSNBRG00000003707	polr3c	99	31.934	FBgn0038057	CG12267	97	31.627	Drosophila_melanogaster
ENSNBRG00000003707	polr3c	99	56.673	ENSETEG00000017696	POLR3C	99	56.545	Echinops_telfairi
ENSNBRG00000003707	polr3c	99	64.168	ENSEASG00005007417	POLR3C	99	64.000	Equus_asinus_asinus
ENSNBRG00000003707	polr3c	99	62.340	ENSECAG00000023713	POLR3C	99	62.182	Equus_caballus
ENSNBRG00000003707	polr3c	99	62.271	ENSEEUG00000011124	POLR3C	99	61.931	Erinaceus_europaeus
ENSNBRG00000003707	polr3c	99	81.651	ENSELUG00000013209	polr3c	99	81.284	Esox_lucius
ENSNBRG00000003707	polr3c	99	64.534	ENSFCAG00000013360	POLR3C	99	64.545	Felis_catus
ENSNBRG00000003707	polr3c	99	63.803	ENSFDAG00000021078	POLR3C	99	63.455	Fukomys_damarensis
ENSNBRG00000003707	polr3c	99	86.264	ENSFHEG00000000872	polr3c	100	86.264	Fundulus_heteroclitus
ENSNBRG00000003707	polr3c	99	80.699	ENSGMOG00000018937	polr3c	99	80.699	Gadus_morhua
ENSNBRG00000003707	polr3c	86	59.748	ENSGALG00000052515	-	100	59.583	Gallus_gallus
ENSNBRG00000003707	polr3c	99	86.813	ENSGAFG00000014721	polr3c	100	86.813	Gambusia_affinis
ENSNBRG00000003707	polr3c	100	87.751	ENSGACG00000011829	polr3c	100	88.665	Gasterosteus_aculeatus
ENSNBRG00000003707	polr3c	99	64.899	ENSGAGG00000010176	POLR3C	99	64.182	Gopherus_agassizii
ENSNBRG00000003707	polr3c	99	64.168	ENSGGOG00000007279	POLR3C	99	64.000	Gorilla_gorilla
ENSNBRG00000003707	polr3c	100	99.452	ENSHBUG00000003619	polr3c	100	99.452	Haplochromis_burtoni
ENSNBRG00000003707	polr3c	99	63.620	ENSHGLG00000014978	POLR3C	99	63.273	Heterocephalus_glaber_female
ENSNBRG00000003707	polr3c	99	63.620	ENSHGLG00100015620	POLR3C	99	63.273	Heterocephalus_glaber_male
ENSNBRG00000003707	polr3c	100	80.804	ENSHCOG00000000823	polr3c	99	80.292	Hippocampus_comes
ENSNBRG00000003707	polr3c	99	76.000	ENSIPUG00000008657	polr3c	99	75.818	Ictalurus_punctatus
ENSNBRG00000003707	polr3c	99	64.899	ENSSTOG00000014601	POLR3C	99	64.364	Ictidomys_tridecemlineatus
ENSNBRG00000003707	polr3c	99	65.138	ENSJJAG00000011447	Polr3c	99	64.781	Jaculus_jaculus
ENSNBRG00000003707	polr3c	99	85.897	ENSKMAG00000001574	polr3c	99	85.792	Kryptolebias_marmoratus
ENSNBRG00000003707	polr3c	100	87.751	ENSLBEG00000026567	polr3c	99	87.751	Labrus_bergylta
ENSNBRG00000003707	polr3c	99	64.771	ENSLACG00000017216	POLR3C	99	64.220	Latimeria_chalumnae
ENSNBRG00000003707	polr3c	99	64.209	ENSLOCG00000006400	polr3c	99	65.217	Lepisosteus_oculatus
ENSNBRG00000003707	polr3c	99	64.899	ENSLAFG00000029485	POLR3C	99	64.727	Loxodonta_africana
ENSNBRG00000003707	polr3c	99	64.351	ENSMFAG00000040338	POLR3C	99	64.182	Macaca_fascicularis
ENSNBRG00000003707	polr3c	99	64.351	ENSMMUG00000016735	POLR3C	99	64.182	Macaca_mulatta
ENSNBRG00000003707	polr3c	99	64.351	ENSMNEG00000040944	POLR3C	99	64.182	Macaca_nemestrina
ENSNBRG00000003707	polr3c	99	64.351	ENSMLEG00000031091	POLR3C	99	64.182	Mandrillus_leucophaeus
ENSNBRG00000003707	polr3c	100	87.386	ENSMAMG00000014770	polr3c	99	87.386	Mastacembelus_armatus
ENSNBRG00000003707	polr3c	100	98.720	ENSMZEG00005015882	polr3c	100	98.720	Maylandia_zebra
ENSNBRG00000003707	polr3c	78	53.488	ENSMAUG00000021521	-	98	53.023	Mesocricetus_auratus
ENSNBRG00000003707	polr3c	99	63.736	ENSMAUG00000001454	-	99	63.570	Mesocricetus_auratus
ENSNBRG00000003707	polr3c	99	65.265	ENSMICG00000034253	POLR3C	99	64.364	Microcebus_murinus
ENSNBRG00000003707	polr3c	99	60.037	ENSMOCG00000000997	Polr3c	99	59.669	Microtus_ochrogaster
ENSNBRG00000003707	polr3c	99	87.729	ENSMMOG00000003989	polr3c	100	87.363	Mola_mola
ENSNBRG00000003707	polr3c	99	65.209	ENSMODG00000018745	-	74	64.855	Monodelphis_domestica
ENSNBRG00000003707	polr3c	99	88.029	ENSMALG00000000156	polr3c	99	88.029	Monopterus_albus
ENSNBRG00000003707	polr3c	99	63.919	MGP_CAROLIEiJ_G0025390	Polr3c	99	63.388	Mus_caroli
ENSNBRG00000003707	polr3c	99	63.553	ENSMUSG00000028099	Polr3c	99	63.206	Mus_musculus
ENSNBRG00000003707	polr3c	99	63.736	MGP_PahariEiJ_G0026835	Polr3c	99	63.206	Mus_pahari
ENSNBRG00000003707	polr3c	99	63.553	MGP_SPRETEiJ_G0026337	Polr3c	99	63.024	Mus_spretus
ENSNBRG00000003707	polr3c	99	64.899	ENSMPUG00000000656	POLR3C	99	64.182	Mustela_putorius_furo
ENSNBRG00000003707	polr3c	99	64.545	ENSMLUG00000004060	POLR3C	99	63.555	Myotis_lucifugus
ENSNBRG00000003707	polr3c	99	63.736	ENSNGAG00000013090	Polr3c	99	63.570	Nannospalax_galili
ENSNBRG00000003707	polr3c	99	64.351	ENSNLEG00000005645	POLR3C	99	64.182	Nomascus_leucogenys
ENSNBRG00000003707	polr3c	86	73.171	ENSMEUG00000012664	POLR3C	86	73.171	Notamacropus_eugenii
ENSNBRG00000003707	polr3c	99	62.706	ENSOPRG00000004244	POLR3C	99	62.545	Ochotona_princeps
ENSNBRG00000003707	polr3c	99	63.437	ENSODEG00000000304	POLR3C	99	63.091	Octodon_degus
ENSNBRG00000003707	polr3c	100	97.623	ENSONIG00000006370	polr3c	100	97.623	Oreochromis_niloticus
ENSNBRG00000003707	polr3c	68	46.277	ENSOANG00000000559	-	100	46.277	Ornithorhynchus_anatinus
ENSNBRG00000003707	polr3c	99	64.351	ENSOCUG00000003050	POLR3C	99	64.000	Oryctolagus_cuniculus
ENSNBRG00000003707	polr3c	99	86.004	ENSORLG00000010133	polr3c	99	85.267	Oryzias_latipes
ENSNBRG00000003707	polr3c	99	85.451	ENSORLG00020009245	polr3c	99	83.725	Oryzias_latipes_hni
ENSNBRG00000003707	polr3c	99	85.635	ENSORLG00015015223	polr3c	99	84.899	Oryzias_latipes_hsok
ENSNBRG00000003707	polr3c	100	85.558	ENSOMEG00000008558	polr3c	99	85.558	Oryzias_melastigma
ENSNBRG00000003707	polr3c	99	63.620	ENSOGAG00000000209	POLR3C	99	63.455	Otolemur_garnettii
ENSNBRG00000003707	polr3c	99	65.082	ENSOARG00000020588	POLR3C	99	64.727	Ovis_aries
ENSNBRG00000003707	polr3c	99	64.534	ENSPPAG00000025184	POLR3C	99	64.364	Pan_paniscus
ENSNBRG00000003707	polr3c	99	64.534	ENSPPRG00000008809	POLR3C	99	64.545	Panthera_pardus
ENSNBRG00000003707	polr3c	99	64.534	ENSPTIG00000009916	POLR3C	99	64.545	Panthera_tigris_altaica
ENSNBRG00000003707	polr3c	99	64.351	ENSPTRG00000001208	POLR3C	99	64.182	Pan_troglodytes
ENSNBRG00000003707	polr3c	99	64.351	ENSPANG00000019404	POLR3C	99	64.182	Papio_anubis
ENSNBRG00000003707	polr3c	99	73.333	ENSPKIG00000014883	polr3c	99	72.613	Paramormyrops_kingsleyae
ENSNBRG00000003707	polr3c	99	64.168	ENSPSIG00000004694	POLR3C	99	64.364	Pelodiscus_sinensis
ENSNBRG00000003707	polr3c	99	84.375	ENSPMGG00000007761	polr3c	99	83.364	Periophthalmus_magnuspinnatus
ENSNBRG00000003707	polr3c	99	63.553	ENSPEMG00000016322	Polr3c	99	63.388	Peromyscus_maniculatus_bairdii
ENSNBRG00000003707	polr3c	99	59.239	ENSPMAG00000006993	polr3c	99	59.239	Petromyzon_marinus
ENSNBRG00000003707	polr3c	99	65.209	ENSPCIG00000011954	POLR3C	99	64.855	Phascolarctos_cinereus
ENSNBRG00000003707	polr3c	99	84.826	ENSPFOG00000014106	polr3c	100	85.558	Poecilia_formosa
ENSNBRG00000003707	polr3c	99	86.264	ENSPLAG00000018932	polr3c	100	86.264	Poecilia_latipinna
ENSNBRG00000003707	polr3c	99	85.009	ENSPMEG00000023273	polr3c	100	85.740	Poecilia_mexicana
ENSNBRG00000003707	polr3c	99	85.348	ENSPREG00000017050	polr3c	100	85.531	Poecilia_reticulata
ENSNBRG00000003707	polr3c	99	64.534	ENSPPYG00000000936	POLR3C	99	64.364	Pongo_abelii
ENSNBRG00000003707	polr3c	90	65.060	ENSPCAG00000010501	POLR3C	99	64.870	Procavia_capensis
ENSNBRG00000003707	polr3c	99	56.620	ENSPCOG00000024937	POLR3C	99	55.618	Propithecus_coquereli
ENSNBRG00000003707	polr3c	99	63.934	ENSPVAG00000014483	POLR3C	99	63.768	Pteropus_vampyrus
ENSNBRG00000003707	polr3c	100	99.634	ENSPNYG00000004504	polr3c	100	99.634	Pundamilia_nyererei
ENSNBRG00000003707	polr3c	98	75.881	ENSPNAG00000018675	polr3c	99	76.044	Pygocentrus_nattereri
ENSNBRG00000003707	polr3c	99	63.553	ENSRNOG00000033560	Polr3c	99	63.024	Rattus_norvegicus
ENSNBRG00000003707	polr3c	99	63.985	ENSRBIG00000035432	POLR3C	99	64.000	Rhinopithecus_bieti
ENSNBRG00000003707	polr3c	99	63.985	ENSRROG00000039959	POLR3C	99	64.000	Rhinopithecus_roxellana
ENSNBRG00000003707	polr3c	90	62.955	ENSSBOG00000028429	POLR3C	99	62.978	Saimiri_boliviensis_boliviensis
ENSNBRG00000003707	polr3c	99	64.717	ENSSHAG00000018565	POLR3C	99	64.182	Sarcophilus_harrisii
ENSNBRG00000003707	polr3c	99	74.406	ENSSFOG00015021863	polr3c	99	73.646	Scleropages_formosus
ENSNBRG00000003707	polr3c	100	86.521	ENSSMAG00000016000	polr3c	99	86.885	Scophthalmus_maximus
ENSNBRG00000003707	polr3c	100	87.569	ENSSDUG00000006590	polr3c	99	87.569	Seriola_dumerili
ENSNBRG00000003707	polr3c	100	86.703	ENSSLDG00000015614	polr3c	97	88.342	Seriola_lalandi_dorsalis
ENSNBRG00000003707	polr3c	60	71.171	ENSSARG00000014380	POLR3C	99	71.171	Sorex_araneus
ENSNBRG00000003707	polr3c	99	65.265	ENSSPUG00000001834	POLR3C	99	64.674	Sphenodon_punctatus
ENSNBRG00000003707	polr3c	100	90.311	ENSSPAG00000022520	polr3c	99	90.311	Stegastes_partitus
ENSNBRG00000003707	polr3c	99	64.534	ENSSSCG00000006691	POLR3C	99	63.818	Sus_scrofa
ENSNBRG00000003707	polr3c	99	58.727	ENSTGUG00000016941	POLR3C	99	59.307	Taeniopygia_guttata
ENSNBRG00000003707	polr3c	99	82.234	ENSTRUG00000010726	polr3c	100	82.418	Takifugu_rubripes
ENSNBRG00000003707	polr3c	99	82.601	ENSTNIG00000019501	polr3c	100	82.967	Tetraodon_nigroviridis
ENSNBRG00000003707	polr3c	74	65.848	ENSTBEG00000015610	POLR3C	98	65.122	Tupaia_belangeri
ENSNBRG00000003707	polr3c	53	65.984	ENSTTRG00000009216	POLR3C	55	65.984	Tursiops_truncatus
ENSNBRG00000003707	polr3c	99	64.351	ENSUAMG00000021906	POLR3C	99	64.364	Ursus_americanus
ENSNBRG00000003707	polr3c	99	64.351	ENSUMAG00000010180	POLR3C	99	64.364	Ursus_maritimus
ENSNBRG00000003707	polr3c	99	64.534	ENSVVUG00000007421	POLR3C	99	63.985	Vulpes_vulpes
ENSNBRG00000003707	polr3c	99	77.555	ENSXCOG00000019524	polr3c	100	77.737	Xiphophorus_couchianus
ENSNBRG00000003707	polr3c	99	85.714	ENSXMAG00000016215	polr3c	100	85.714	Xiphophorus_maculatus