EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003761 (Gene tree)
Gene ID: 102789130
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA-binding protein 25-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 9986 bases
Position: chrJH422330.1:754774-764759
Accession: 102789130
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004800	RRM_1	PF00076.22	1.4e-08	1	1
ENSNBRP00000004781	RRM_1	PF00076.22	1.5e-08	1	1
ENSNBRP00000004800	PWI	PF01480.17	9.4e-14	1	1
ENSNBRP00000004781	PWI	PF01480.17	1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004946	-	2337	-	ENSNBRP00000004800	778 (aa)	-	-
ENSNBRT00000004925	-	3113	XM_006798607	ENSNBRP00000004781	819 (aa)	XP_006798670	-

Gene Model

Click here to download ENSNBRG00000003761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003761	rbm25a	56	75.699	ENSAPOG00000015321	rbm25b	56	78.681	Acanthochromis_polyacanthus
ENSNBRG00000003761	rbm25a	58	88.210	ENSAPOG00000017757	rbm25a	56	89.011	Acanthochromis_polyacanthus
ENSNBRG00000003761	rbm25a	100	90.920	ENSACIG00000019482	rbm25a	55	97.357	Amphilophus_citrinellus
ENSNBRG00000003761	rbm25a	57	73.207	ENSAOCG00000019308	rbm25b	55	73.742	Amphiprion_ocellaris
ENSNBRG00000003761	rbm25a	57	87.846	ENSAOCG00000013695	rbm25a	83	90.932	Amphiprion_ocellaris
ENSNBRG00000003761	rbm25a	58	76.151	ENSAPEG00000009666	rbm25b	58	76.872	Amphiprion_percula
ENSNBRG00000003761	rbm25a	100	92.131	ENSAPEG00000007514	rbm25a	56	90.652	Amphiprion_percula
ENSNBRG00000003761	rbm25a	58	75.417	ENSATEG00000017312	rbm25b	55	76.586	Anabas_testudineus
ENSNBRG00000003761	rbm25a	57	92.949	ENSATEG00000020676	rbm25a	63	93.188	Anabas_testudineus
ENSNBRG00000003761	rbm25a	57	76.956	ENSACLG00000024359	rbm25b	55	78.462	Astatotilapia_calliptera
ENSNBRG00000003761	rbm25a	100	83.157	ENSACLG00000027482	rbm25a	100	85.340	Astatotilapia_calliptera
ENSNBRG00000003761	rbm25a	54	76.540	ENSAMXG00000024525	rbm25b	52	77.176	Astyanax_mexicanus
ENSNBRG00000003761	rbm25a	54	34.598	WBGene00012245	W04D2.6	54	33.255	Caenorhabditis_elegans
ENSNBRG00000003761	rbm25a	50	66.076	ENSCHIG00000021190	-	99	73.522	Capra_hircus
ENSNBRG00000003761	rbm25a	66	78.261	ENSCAPG00000005239	RBM25	75	79.121	Cavia_aperea
ENSNBRG00000003761	rbm25a	61	86.486	ENSCHOG00000008903	RBM25	63	86.301	Choloepus_hoffmanni
ENSNBRG00000003761	rbm25a	61	70.588	ENSCSEG00000020737	rbm25b	56	75.274	Cynoglossus_semilaevis
ENSNBRG00000003761	rbm25a	55	85.746	ENSCSEG00000009430	rbm25a	56	85.903	Cynoglossus_semilaevis
ENSNBRG00000003761	rbm25a	70	79.741	ENSCVAG00000005498	rbm25a	99	83.120	Cyprinodon_variegatus
ENSNBRG00000003761	rbm25a	56	65.668	ENSDARG00000039266	rbm25a	99	98.734	Danio_rerio
ENSNBRG00000003761	rbm25a	63	79.383	ENSDARG00000006395	rbm25b	51	74.419	Danio_rerio
ENSNBRG00000003761	rbm25a	91	70.690	FBgn0028474	CG4119	58	72.973	Drosophila_melanogaster
ENSNBRG00000003761	rbm25a	56	70.933	ENSELUG00000021847	rbm25a	51	69.757	Esox_lucius
ENSNBRG00000003761	rbm25a	57	73.196	ENSELUG00000007730	rbm25b	56	74.786	Esox_lucius
ENSNBRG00000003761	rbm25a	100	82.225	ENSFHEG00000005318	rbm25a	58	80.040	Fundulus_heteroclitus
ENSNBRG00000003761	rbm25a	57	76.200	ENSFHEG00000003513	rbm25b	56	78.289	Fundulus_heteroclitus
ENSNBRG00000003761	rbm25a	80	87.059	ENSGMOG00000014070	rbm25a	87	76.974	Gadus_morhua
ENSNBRG00000003761	rbm25a	84	73.246	ENSGMOG00000014097	rbm25b	63	73.246	Gadus_morhua
ENSNBRG00000003761	rbm25a	98	71.259	ENSGAFG00000001092	rbm25b	50	77.273	Gambusia_affinis
ENSNBRG00000003761	rbm25a	100	83.012	ENSGAFG00000018036	rbm25a	54	82.895	Gambusia_affinis
ENSNBRG00000003761	rbm25a	100	99.878	ENSHBUG00000016908	rbm25a	100	99.878	Haplochromis_burtoni
ENSNBRG00000003761	rbm25a	57	76.956	ENSHBUG00000018499	rbm25b	55	78.681	Haplochromis_burtoni
ENSNBRG00000003761	rbm25a	100	69.498	ENSHCOG00000000142	rbm25b	55	72.893	Hippocampus_comes
ENSNBRG00000003761	rbm25a	56	76.824	ENSKMAG00000018826	rbm25b	55	77.802	Kryptolebias_marmoratus
ENSNBRG00000003761	rbm25a	60	77.778	ENSKMAG00000016242	rbm25a	90	83.883	Kryptolebias_marmoratus
ENSNBRG00000003761	rbm25a	100	72.859	ENSLBEG00000010667	rbm25b	56	76.316	Labrus_bergylta
ENSNBRG00000003761	rbm25a	50	66.076	ENSMMUG00000002332	RBM25	98	73.522	Macaca_mulatta
ENSNBRG00000003761	rbm25a	58	77.035	ENSMAMG00000004524	rbm25b	55	78.097	Mastacembelus_armatus
ENSNBRG00000003761	rbm25a	57	80.728	ENSMAMG00000000165	rbm25a	51	86.396	Mastacembelus_armatus
ENSNBRG00000003761	rbm25a	100	99.756	ENSMZEG00005011183	rbm25a	100	99.756	Maylandia_zebra
ENSNBRG00000003761	rbm25a	57	76.956	ENSMZEG00005001453	rbm25b	55	78.462	Maylandia_zebra
ENSNBRG00000003761	rbm25a	100	66.028	ENSMMOG00000015545	rbm25b	61	76.484	Mola_mola
ENSNBRG00000003761	rbm25a	57	86.966	ENSMMOG00000009065	rbm25a	55	87.033	Mola_mola
ENSNBRG00000003761	rbm25a	58	76.132	ENSMALG00000020441	rbm25b	86	78.337	Monopterus_albus
ENSNBRG00000003761	rbm25a	50	93.590	ENSMALG00000020459	rbm25a	90	93.590	Monopterus_albus
ENSNBRG00000003761	rbm25a	52	82.222	MGP_CAROLIEiJ_G0017921	Rbm25	92	72.626	Mus_caroli
ENSNBRG00000003761	rbm25a	52	82.222	ENSMUSG00000010608	Rbm25	92	72.626	Mus_musculus
ENSNBRG00000003761	rbm25a	52	82.222	MGP_PahariEiJ_G0029677	Rbm25	92	72.626	Mus_pahari
ENSNBRG00000003761	rbm25a	52	82.222	MGP_SPRETEiJ_G0018766	-	92	72.626	Mus_spretus
ENSNBRG00000003761	rbm25a	100	63.182	ENSOCUG00000013737	RBM25	83	74.058	Oryctolagus_cuniculus
ENSNBRG00000003761	rbm25a	58	75.158	ENSORLG00000011874	rbm25b	55	77.753	Oryzias_latipes
ENSNBRG00000003761	rbm25a	50	82.143	ENSORLG00000009958	rbm25a	100	81.888	Oryzias_latipes
ENSNBRG00000003761	rbm25a	58	74.737	ENSORLG00020016422	rbm25b	55	77.533	Oryzias_latipes_hni
ENSNBRG00000003761	rbm25a	58	75.368	ENSORLG00015011269	rbm25b	55	77.974	Oryzias_latipes_hsok
ENSNBRG00000003761	rbm25a	57	83.503	ENSOMEG00000022138	rbm25a	57	84.000	Oryzias_melastigma
ENSNBRG00000003761	rbm25a	58	74.686	ENSOMEG00000023172	rbm25b	55	77.753	Oryzias_melastigma
ENSNBRG00000003761	rbm25a	57	79.036	ENSPKIG00000003203	rbm25b	55	79.431	Paramormyrops_kingsleyae
ENSNBRG00000003761	rbm25a	54	68.810	ENSPMGG00000001791	rbm25a	97	70.093	Periophthalmus_magnuspinnatus
ENSNBRG00000003761	rbm25a	57	75.992	ENSPMGG00000015740	rbm25b	56	75.983	Periophthalmus_magnuspinnatus
ENSNBRG00000003761	rbm25a	58	75.413	ENSPFOG00000018808	rbm25b	55	77.440	Poecilia_formosa
ENSNBRG00000003761	rbm25a	100	82.394	ENSPFOG00000017931	rbm25a	90	87.179	Poecilia_formosa
ENSNBRG00000003761	rbm25a	100	83.233	ENSPLAG00000018338	rbm25a	90	87.179	Poecilia_latipinna
ENSNBRG00000003761	rbm25a	58	75.207	ENSPMEG00000019161	rbm25b	55	77.440	Poecilia_mexicana
ENSNBRG00000003761	rbm25a	50	76.866	ENSPMEG00000012262	rbm25b	100	77.750	Poecilia_mexicana
ENSNBRG00000003761	rbm25a	100	83.112	ENSPMEG00000024470	rbm25a	90	87.179	Poecilia_mexicana
ENSNBRG00000003761	rbm25a	58	75.514	ENSPREG00000008522	rbm25b	83	77.907	Poecilia_reticulata
ENSNBRG00000003761	rbm25a	100	84.512	ENSPREG00000009228	rbm25a	90	87.179	Poecilia_reticulata
ENSNBRG00000003761	rbm25a	51	76.966	ENSPCAG00000006226	RBM25	77	75.000	Procavia_capensis
ENSNBRG00000003761	rbm25a	60	87.905	ENSPNYG00000022596	rbm25a	100	91.222	Pundamilia_nyererei
ENSNBRG00000003761	rbm25a	59	68.134	ENSPNAG00000012024	rbm25b	51	76.941	Pygocentrus_nattereri
ENSNBRG00000003761	rbm25a	54	67.265	ENSRNOG00000002871	Rbm25l1	51	74.393	Rattus_norvegicus
ENSNBRG00000003761	rbm25a	54	62.889	ENSRROG00000035556	RBM25	96	73.522	Rhinopithecus_roxellana
ENSNBRG00000003761	rbm25a	57	80.342	ENSSFOG00015007093	rbm25	56	81.579	Scleropages_formosus
ENSNBRG00000003761	rbm25a	58	72.141	ENSSMAG00000002520	rbm25b	57	74.784	Scophthalmus_maximus
ENSNBRG00000003761	rbm25a	57	91.489	ENSSMAG00000009745	rbm25a	56	91.685	Scophthalmus_maximus
ENSNBRG00000003761	rbm25a	57	93.376	ENSSDUG00000017984	rbm25a	57	93.626	Seriola_dumerili
ENSNBRG00000003761	rbm25a	56	76.940	ENSSLDG00000024573	rbm25b	98	78.681	Seriola_lalandi_dorsalis
ENSNBRG00000003761	rbm25a	57	93.376	ENSSLDG00000010342	rbm25a	56	93.626	Seriola_lalandi_dorsalis
ENSNBRG00000003761	rbm25a	58	76.569	ENSSPAG00000016168	rbm25b	56	78.118	Stegastes_partitus
ENSNBRG00000003761	rbm25a	58	85.745	ENSSPAG00000011114	rbm25a	85	90.323	Stegastes_partitus
ENSNBRG00000003761	rbm25a	57	75.636	ENSTRUG00000017964	rbm25b	56	76.872	Takifugu_rubripes
ENSNBRG00000003761	rbm25a	56	83.226	ENSTRUG00000003076	rbm25a	59	83.333	Takifugu_rubripes
ENSNBRG00000003761	rbm25a	50	80.000	ENSTNIG00000004673	rbm25a	99	80.000	Tetraodon_nigroviridis
ENSNBRG00000003761	rbm25a	91	66.965	ENSTNIG00000012222	rbm25b	63	74.584	Tetraodon_nigroviridis
ENSNBRG00000003761	rbm25a	62	79.327	ENSTBEG00000010538	-	55	79.327	Tupaia_belangeri
ENSNBRG00000003761	rbm25a	52	67.511	ENSVPAG00000009052	RBM25	77	74.558	Vicugna_pacos
ENSNBRG00000003761	rbm25a	56	60.404	ENSXETG00000021857	rbm25	54	74.614	Xenopus_tropicalis
ENSNBRG00000003761	rbm25a	100	82.874	ENSXCOG00000004043	RBM25	50	83.175	Xiphophorus_couchianus
ENSNBRG00000003761	rbm25a	100	67.947	ENSXCOG00000002222	rbm25b	53	70.925	Xiphophorus_couchianus
ENSNBRG00000003761	rbm25a	100	71.765	ENSXMAG00000017290	rbm25b	83	77.262	Xiphophorus_maculatus
ENSNBRG00000003761	rbm25a	100	83.314	ENSXMAG00000009077	RBM25	58	81.466	Xiphophorus_maculatus