EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000003818 (Gene tree)
Gene ID: 102787425
Gene Symbol: htatsf1
Alias: zgc:66252
Full Name: HIV Tat-specific factor 1 homolog
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 3497 bases
Position: chrJH422280.1:866809-870305
Accession: 102787425
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004816	RRM_1	PF00076.22	2e-15	1	2
ENSNBRP00000004816	RRM_1	PF00076.22	2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000004966	-	1359	XM_006784907	ENSNBRP00000004816	452 (aa)	XP_006784970	UPI0003EC021A

Gene Model

Click here to download ENSNBRG00000003818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003818	htatsf1	95	58.784	ENSG00000102241	HTATSF1	100	55.600	Homo_sapiens
ENSNBRG00000003818	htatsf1	100	82.237	ENSAPOG00000009823	htatsf1	100	82.237	Acanthochromis_polyacanthus
ENSNBRG00000003818	htatsf1	100	88.938	ENSACIG00000020459	htatsf1	100	88.938	Amphilophus_citrinellus
ENSNBRG00000003818	htatsf1	100	80.994	ENSAOCG00000020994	htatsf1	100	81.425	Amphiprion_ocellaris
ENSNBRG00000003818	htatsf1	100	82.391	ENSAPEG00000016432	htatsf1	100	82.391	Amphiprion_percula
ENSNBRG00000003818	htatsf1	93	82.464	ENSATEG00000008903	htatsf1	94	82.464	Anabas_testudineus
ENSNBRG00000003818	htatsf1	92	62.824	ENSAPLG00000012401	HTATSF1	99	62.736	Anas_platyrhynchos
ENSNBRG00000003818	htatsf1	86	60.101	ENSACAG00000009346	HTATSF1	99	60.099	Anolis_carolinensis
ENSNBRG00000003818	htatsf1	86	58.505	ENSANAG00000025458	-	51	59.103	Aotus_nancymaae
ENSNBRG00000003818	htatsf1	100	98.673	ENSACLG00000008096	htatsf1	100	98.673	Astatotilapia_calliptera
ENSNBRG00000003818	htatsf1	99	69.444	ENSAMXG00000008387	htatsf1	99	69.703	Astyanax_mexicanus
ENSNBRG00000003818	htatsf1	95	58.389	ENSBTAG00000032711	HTATSF1	54	60.238	Bos_taurus
ENSNBRG00000003818	htatsf1	78	38.268	WBGene00022025	Y65B4A.1	77	37.158	Caenorhabditis_elegans
ENSNBRG00000003818	htatsf1	96	58.389	ENSCAFG00000023294	HTATSF1	54	59.677	Canis_familiaris
ENSNBRG00000003818	htatsf1	95	58.864	ENSTSYG00000028876	HTATSF1	50	63.384	Carlito_syrichta
ENSNBRG00000003818	htatsf1	81	62.466	ENSCCAG00000025329	-	54	63.171	Cebus_capucinus
ENSNBRG00000003818	htatsf1	95	58.784	ENSCATG00000029963	HTATSF1	54	59.770	Cercocebus_atys
ENSNBRG00000003818	htatsf1	95	58.864	ENSCLAG00000002718	HTATSF1	52	60.817	Chinchilla_lanigera
ENSNBRG00000003818	htatsf1	95	58.784	ENSCSAG00000007505	HTATSF1	54	59.770	Chlorocebus_sabaeus
ENSNBRG00000003818	htatsf1	99	61.822	ENSCPBG00000026092	HTATSF1	98	61.752	Chrysemys_picta_bellii
ENSNBRG00000003818	htatsf1	91	41.866	ENSCING00000005914	-	91	45.333	Ciona_intestinalis
ENSNBRG00000003818	htatsf1	88	41.485	ENSCSAVG00000000371	-	98	40.175	Ciona_savignyi
ENSNBRG00000003818	htatsf1	95	58.784	ENSCANG00000028495	HTATSF1	54	59.770	Colobus_angolensis_palliatus
ENSNBRG00000003818	htatsf1	91	61.268	ENSCGRG00001021602	Htatsf1	51	61.033	Cricetulus_griseus_chok1gshd
ENSNBRG00000003818	htatsf1	100	80.531	ENSCVAG00000014070	htatsf1	99	81.195	Cyprinodon_variegatus
ENSNBRG00000003818	htatsf1	100	66.811	ENSDARG00000056649	htatsf1	100	67.028	Danio_rerio
ENSNBRG00000003818	htatsf1	88	43.424	FBgn0037081	barc	70	43.176	Drosophila_melanogaster
ENSNBRG00000003818	htatsf1	66	46.129	ENSETEG00000006377	-	52	37.221	Echinops_telfairi
ENSNBRG00000003818	htatsf1	90	53.774	ENSEBUG00000001534	htatsf1	83	54.245	Eptatretus_burgeri
ENSNBRG00000003818	htatsf1	95	59.773	ENSEASG00005003440	HTATSF1	53	60.789	Equus_asinus_asinus
ENSNBRG00000003818	htatsf1	95	59.773	ENSECAG00000009156	HTATSF1	53	60.789	Equus_caballus
ENSNBRG00000003818	htatsf1	99	62.766	ENSELUG00000005486	htatsf1	90	64.530	Esox_lucius
ENSNBRG00000003818	htatsf1	95	59.091	ENSFCAG00000031924	HTATSF1	50	63.636	Felis_catus
ENSNBRG00000003818	htatsf1	87	65.586	ENSFALG00000003728	HTATSF1	88	63.923	Ficedula_albicollis
ENSNBRG00000003818	htatsf1	100	81.099	ENSFHEG00000020286	htatsf1	100	80.131	Fundulus_heteroclitus
ENSNBRG00000003818	htatsf1	81	74.731	ENSGMOG00000016444	htatsf1	100	74.728	Gadus_morhua
ENSNBRG00000003818	htatsf1	99	60.907	ENSGALG00000006410	HTATSF1	99	60.475	Gallus_gallus
ENSNBRG00000003818	htatsf1	100	81.498	ENSGAFG00000003041	htatsf1	98	80.525	Gambusia_affinis
ENSNBRG00000003818	htatsf1	100	77.313	ENSGACG00000020459	htatsf1	100	76.432	Gasterosteus_aculeatus
ENSNBRG00000003818	htatsf1	95	58.784	ENSGGOG00000026072	HTATSF1	54	59.770	Gorilla_gorilla
ENSNBRG00000003818	htatsf1	100	98.451	ENSHBUG00000004392	htatsf1	100	98.451	Haplochromis_burtoni
ENSNBRG00000003818	htatsf1	99	69.180	ENSHCOG00000009056	htatsf1	99	69.556	Hippocampus_comes
ENSNBRG00000003818	htatsf1	99	65.618	ENSIPUG00000017828	htatsf1	99	66.387	Ictalurus_punctatus
ENSNBRG00000003818	htatsf1	99	56.757	ENSSTOG00000012505	HTATSF1	62	56.757	Ictidomys_tridecemlineatus
ENSNBRG00000003818	htatsf1	100	83.260	ENSKMAG00000007622	htatsf1	100	82.159	Kryptolebias_marmoratus
ENSNBRG00000003818	htatsf1	100	79.393	ENSLBEG00000001154	htatsf1	100	78.959	Labrus_bergylta
ENSNBRG00000003818	htatsf1	99	61.555	ENSLACG00000015989	HTATSF1	99	60.475	Latimeria_chalumnae
ENSNBRG00000003818	htatsf1	99	47.789	ENSLOCG00000015118	htatsf1	99	47.390	Lepisosteus_oculatus
ENSNBRG00000003818	htatsf1	94	59.677	ENSLAFG00000014307	HTATSF1	55	61.209	Loxodonta_africana
ENSNBRG00000003818	htatsf1	95	58.784	ENSMFAG00000044705	HTATSF1	54	59.770	Macaca_fascicularis
ENSNBRG00000003818	htatsf1	95	58.784	ENSMMUG00000006450	HTATSF1	54	59.770	Macaca_mulatta
ENSNBRG00000003818	htatsf1	95	58.784	ENSMNEG00000024084	HTATSF1	60	59.770	Macaca_nemestrina
ENSNBRG00000003818	htatsf1	95	58.784	ENSMLEG00000035511	HTATSF1	54	59.770	Mandrillus_leucophaeus
ENSNBRG00000003818	htatsf1	99	78.936	ENSMAMG00000021225	htatsf1	99	78.936	Mastacembelus_armatus
ENSNBRG00000003818	htatsf1	100	98.894	ENSMZEG00005000485	htatsf1	100	98.894	Maylandia_zebra
ENSNBRG00000003818	htatsf1	93	61.982	ENSMGAG00000003558	HTATSF1	97	61.894	Meleagris_gallopavo
ENSNBRG00000003818	htatsf1	82	62.205	ENSMAUG00000007235	Htatsf1	52	61.985	Mesocricetus_auratus
ENSNBRG00000003818	htatsf1	95	58.333	ENSMICG00000009348	HTATSF1	55	59.310	Microcebus_murinus
ENSNBRG00000003818	htatsf1	82	61.640	ENSMOCG00000022370	-	52	59.811	Microtus_ochrogaster
ENSNBRG00000003818	htatsf1	82	63.395	ENSMOCG00000023007	-	51	63.081	Microtus_ochrogaster
ENSNBRG00000003818	htatsf1	100	79.249	ENSMMOG00000011013	htatsf1	100	79.029	Mola_mola
ENSNBRG00000003818	htatsf1	100	61.422	ENSMODG00000014087	-	98	61.422	Monodelphis_domestica
ENSNBRG00000003818	htatsf1	57	58.801	ENSMODG00000000199	-	91	56.911	Monodelphis_domestica
ENSNBRG00000003818	htatsf1	100	79.515	ENSMALG00000019977	htatsf1	100	79.295	Monopterus_albus
ENSNBRG00000003818	htatsf1	82	62.434	MGP_CAROLIEiJ_G0033094	Htatsf1	50	63.131	Mus_caroli
ENSNBRG00000003818	htatsf1	96	57.955	ENSMLUG00000009234	-	54	60.000	Myotis_lucifugus
ENSNBRG00000003818	htatsf1	82	62.599	ENSNGAG00000017831	Htatsf1	51	63.544	Nannospalax_galili
ENSNBRG00000003818	htatsf1	95	59.009	ENSNLEG00000002746	HTATSF1	54	60.000	Nomascus_leucogenys
ENSNBRG00000003818	htatsf1	90	63.527	ENSMEUG00000004133	-	94	63.527	Notamacropus_eugenii
ENSNBRG00000003818	htatsf1	100	97.124	ENSONIG00000008638	htatsf1	100	97.124	Oreochromis_niloticus
ENSNBRG00000003818	htatsf1	91	61.137	ENSOANG00000011674	-	98	61.137	Ornithorhynchus_anatinus
ENSNBRG00000003818	htatsf1	96	58.296	ENSOCUG00000012570	HTATSF1	54	59.584	Oryctolagus_cuniculus
ENSNBRG00000003818	htatsf1	100	77.074	ENSORLG00000002356	htatsf1	100	75.328	Oryzias_latipes
ENSNBRG00000003818	htatsf1	100	76.304	ENSORLG00020017818	htatsf1	97	76.304	Oryzias_latipes_hni
ENSNBRG00000003818	htatsf1	100	77.193	ENSORLG00015002268	htatsf1	100	76.096	Oryzias_latipes_hsok
ENSNBRG00000003818	htatsf1	100	79.212	ENSOMEG00000007564	htatsf1	100	77.243	Oryzias_melastigma
ENSNBRG00000003818	htatsf1	88	59.902	ENSOARG00000000481	-	50	60.147	Ovis_aries
ENSNBRG00000003818	htatsf1	95	58.784	ENSPPAG00000024268	HTATSF1	54	59.770	Pan_paniscus
ENSNBRG00000003818	htatsf1	95	59.318	ENSPPRG00000014209	HTATSF1	50	63.889	Panthera_pardus
ENSNBRG00000003818	htatsf1	95	58.784	ENSPTRG00000044591	HTATSF1	54	59.770	Pan_troglodytes
ENSNBRG00000003818	htatsf1	99	68.026	ENSPKIG00000024852	htatsf1	99	67.164	Paramormyrops_kingsleyae
ENSNBRG00000003818	htatsf1	72	68.437	ENSPSIG00000010192	HTATSF1	98	66.573	Pelodiscus_sinensis
ENSNBRG00000003818	htatsf1	100	73.581	ENSPMGG00000006172	htatsf1	100	72.926	Periophthalmus_magnuspinnatus
ENSNBRG00000003818	htatsf1	99	56.989	ENSPCIG00000018896	-	99	55.361	Phascolarctos_cinereus
ENSNBRG00000003818	htatsf1	90	63.221	ENSPCIG00000030173	-	91	63.221	Phascolarctos_cinereus
ENSNBRG00000003818	htatsf1	100	81.416	ENSPFOG00000007871	htatsf1	97	80.531	Poecilia_formosa
ENSNBRG00000003818	htatsf1	100	81.195	ENSPLAG00000007532	htatsf1	100	80.310	Poecilia_latipinna
ENSNBRG00000003818	htatsf1	100	80.973	ENSPMEG00000000352	htatsf1	100	80.088	Poecilia_mexicana
ENSNBRG00000003818	htatsf1	100	81.195	ENSPREG00000007811	htatsf1	100	80.310	Poecilia_reticulata
ENSNBRG00000003818	htatsf1	95	58.784	ENSPPYG00000020765	HTATSF1	54	59.770	Pongo_abelii
ENSNBRG00000003818	htatsf1	84	57.364	ENSPCAG00000010576	HTATSF1	51	57.364	Procavia_capensis
ENSNBRG00000003818	htatsf1	95	59.184	ENSPCOG00000021823	HTATSF1	54	60.185	Propithecus_coquereli
ENSNBRG00000003818	htatsf1	95	58.770	ENSPVAG00000010281	HTATSF1	58	59.441	Pteropus_vampyrus
ENSNBRG00000003818	htatsf1	100	98.673	ENSPNYG00000016693	htatsf1	100	98.673	Pundamilia_nyererei
ENSNBRG00000003818	htatsf1	99	68.607	ENSPNAG00000006166	htatsf1	99	68.776	Pygocentrus_nattereri
ENSNBRG00000003818	htatsf1	82	62.334	ENSRNOG00000027761	Htatsf1	50	62.103	Rattus_norvegicus
ENSNBRG00000003818	htatsf1	95	58.559	ENSRROG00000021939	HTATSF1	54	59.540	Rhinopithecus_roxellana
ENSNBRG00000003818	htatsf1	94	57.845	ENSSBOG00000017914	-	52	59.902	Saimiri_boliviensis_boliviensis
ENSNBRG00000003818	htatsf1	86	66.412	ENSSHAG00000006440	-	97	66.412	Sarcophilus_harrisii
ENSNBRG00000003818	htatsf1	99	59.570	ENSSHAG00000018908	-	88	63.702	Sarcophilus_harrisii
ENSNBRG00000003818	htatsf1	99	62.025	ENSSFOG00015012002	htatsf1	99	62.236	Scleropages_formosus
ENSNBRG00000003818	htatsf1	100	77.056	ENSSMAG00000002970	htatsf1	100	76.407	Scophthalmus_maximus
ENSNBRG00000003818	htatsf1	100	77.434	ENSSDUG00000020002	htatsf1	99	76.549	Seriola_dumerili
ENSNBRG00000003818	htatsf1	100	80.837	ENSSLDG00000016880	htatsf1	100	80.617	Seriola_lalandi_dorsalis
ENSNBRG00000003818	htatsf1	92	56.944	ENSSARG00000005193	HTATSF1	57	56.944	Sorex_araneus
ENSNBRG00000003818	htatsf1	99	59.574	ENSSPUG00000014767	HTATSF1	98	60.907	Sphenodon_punctatus
ENSNBRG00000003818	htatsf1	100	84.314	ENSSPAG00000000732	htatsf1	100	84.314	Stegastes_partitus
ENSNBRG00000003818	htatsf1	82	63.852	ENSSSCG00000023062	HTATSF1	60	60.780	Sus_scrofa
ENSNBRG00000003818	htatsf1	98	60.262	ENSTGUG00000002099	HTATSF1	98	60.262	Taeniopygia_guttata
ENSNBRG00000003818	htatsf1	100	76.106	ENSTRUG00000013383	htatsf1	100	76.106	Takifugu_rubripes
ENSNBRG00000003818	htatsf1	100	77.434	ENSTNIG00000016140	htatsf1	99	77.212	Tetraodon_nigroviridis
ENSNBRG00000003818	htatsf1	78	63.361	ENSTTRG00000002269	HTATSF1	58	62.155	Tursiops_truncatus
ENSNBRG00000003818	htatsf1	96	58.559	ENSUAMG00000012048	HTATSF1	50	63.409	Ursus_americanus
ENSNBRG00000003818	htatsf1	100	59.870	ENSXETG00000019749	htatsf1	85	59.913	Xenopus_tropicalis
ENSNBRG00000003818	htatsf1	97	78.864	ENSXCOG00000006912	htatsf1	94	80.476	Xiphophorus_couchianus
ENSNBRG00000003818	htatsf1	100	80.310	ENSXMAG00000000490	htatsf1	100	79.425	Xiphophorus_maculatus