EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000003877 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 5081 bases
Position: chrJH422414.1:813811-818891
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000004891	PARP	PF00644.20	8.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005044	-	885	-	ENSNBRP00000004891	294 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000003877's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000003877's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000003877	-	88	42.366	ENSNBRG00000005232	-	55	42.366
ENSNBRG00000003877	-	60	31.414	ENSNBRG00000005708	parp11	68	31.414
ENSNBRG00000003877	-	68	37.186	ENSNBRG00000003116	-	63	37.186
ENSNBRG00000003877	-	65	78.534	ENSNBRG00000004048	-	100	78.534
ENSNBRG00000003877	-	85	38.889	ENSNBRG00000002998	-	71	41.414
ENSNBRG00000003877	-	98	78.276	ENSNBRG00000004017	-	100	78.276
ENSNBRG00000003877	-	62	33.333	ENSNBRG00000010331	-	79	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000003877	-	87	44.487	ENSAPOG00000021642	-	54	44.487	Acanthochromis_polyacanthus
ENSNBRG00000003877	-	86	57.874	ENSAPOG00000007412	-	84	57.874	Acanthochromis_polyacanthus
ENSNBRG00000003877	-	98	39.100	ENSACIG00000003944	si:ch211-219a4.3	75	39.100	Amphilophus_citrinellus
ENSNBRG00000003877	-	68	46.766	ENSACIG00000020176	-	72	46.766	Amphilophus_citrinellus
ENSNBRG00000003877	-	97	83.451	ENSACIG00000009912	-	89	83.451	Amphilophus_citrinellus
ENSNBRG00000003877	-	68	82.000	ENSACIG00000009927	-	97	82.000	Amphilophus_citrinellus
ENSNBRG00000003877	-	88	59.542	ENSAOCG00000002980	-	83	59.542	Amphiprion_ocellaris
ENSNBRG00000003877	-	88	71.642	ENSAPEG00000003728	-	50	71.642	Amphiprion_percula
ENSNBRG00000003877	-	87	42.748	ENSAPEG00000001687	-	54	42.748	Amphiprion_percula
ENSNBRG00000003877	-	88	41.445	ENSACLG00000005418	-	81	41.445	Astatotilapia_calliptera
ENSNBRG00000003877	-	95	79.211	ENSACLG00000013093	-	85	79.211	Astatotilapia_calliptera
ENSNBRG00000003877	-	88	39.535	ENSACLG00000001129	-	52	39.535	Astatotilapia_calliptera
ENSNBRG00000003877	-	68	77.387	ENSACLG00000013170	-	91	77.387	Astatotilapia_calliptera
ENSNBRG00000003877	-	89	45.283	ENSCSEG00000020071	-	73	45.283	Cynoglossus_semilaevis
ENSNBRG00000003877	-	96	44.162	ENSCSEG00000017936	si:ch211-219a4.3	76	41.522	Cynoglossus_semilaevis
ENSNBRG00000003877	-	67	45.685	ENSCVAG00000017520	-	83	45.685	Cyprinodon_variegatus
ENSNBRG00000003877	-	88	68.077	ENSCVAG00000014329	-	81	68.077	Cyprinodon_variegatus
ENSNBRG00000003877	-	68	63.317	ENSFHEG00000008820	-	87	63.317	Fundulus_heteroclitus
ENSNBRG00000003877	-	85	39.015	ENSGMOG00000011231	-	79	39.015	Gadus_morhua
ENSNBRG00000003877	-	88	66.279	ENSGAFG00000002533	-	82	66.279	Gambusia_affinis
ENSNBRG00000003877	-	87	42.424	ENSGAFG00000001814	-	70	42.424	Gambusia_affinis
ENSNBRG00000003877	-	88	42.748	ENSHBUG00000018235	-	55	42.748	Haplochromis_burtoni
ENSNBRG00000003877	-	85	44.400	ENSHBUG00000005369	-	72	44.400	Haplochromis_burtoni
ENSNBRG00000003877	-	94	63.571	ENSKMAG00000012870	-	81	63.571	Kryptolebias_marmoratus
ENSNBRG00000003877	-	95	63.958	ENSKMAG00000003908	-	89	63.958	Kryptolebias_marmoratus
ENSNBRG00000003877	-	67	43.719	ENSLACG00000009107	-	97	43.719	Latimeria_chalumnae
ENSNBRG00000003877	-	86	42.520	ENSMZEG00005025678	si:ch211-219a4.3	72	42.520	Maylandia_zebra
ENSNBRG00000003877	-	87	63.672	ENSMZEG00005026601	-	79	63.672	Maylandia_zebra
ENSNBRG00000003877	-	68	36.318	ENSMODG00000007157	-	63	36.318	Monodelphis_domestica
ENSNBRG00000003877	-	54	66.456	ENSMALG00000017146	-	77	66.456	Monopterus_albus
ENSNBRG00000003877	-	60	62.500	ENSMALG00000000434	-	86	62.500	Monopterus_albus
ENSNBRG00000003877	-	88	71.756	ENSONIG00000017776	-	77	71.756	Oreochromis_niloticus
ENSNBRG00000003877	-	98	44.949	ENSORLG00000008781	-	55	44.949	Oryzias_latipes
ENSNBRG00000003877	-	87	70.039	ENSORLG00015003387	-	75	70.039	Oryzias_latipes_hsok
ENSNBRG00000003877	-	98	45.455	ENSORLG00015021971	si:ch211-219a4.3	80	42.160	Oryzias_latipes_hsok
ENSNBRG00000003877	-	87	67.188	ENSOMEG00000016369	-	75	67.188	Oryzias_melastigma
ENSNBRG00000003877	-	98	42.215	ENSOMEG00000019715	si:ch211-219a4.3	81	42.215	Oryzias_melastigma
ENSNBRG00000003877	-	68	65.829	ENSOMEG00000016408	-	60	65.829	Oryzias_melastigma
ENSNBRG00000003877	-	89	70.992	ENSOMEG00000016395	-	82	70.992	Oryzias_melastigma
ENSNBRG00000003877	-	90	70.189	ENSOMEG00000016380	-	78	70.189	Oryzias_melastigma
ENSNBRG00000003877	-	67	46.465	ENSPKIG00000004135	-	56	46.465	Paramormyrops_kingsleyae
ENSNBRG00000003877	-	85	41.313	ENSPMGG00000004482	-	69	41.313	Periophthalmus_magnuspinnatus
ENSNBRG00000003877	-	68	56.500	ENSPMGG00000017987	-	91	56.500	Periophthalmus_magnuspinnatus
ENSNBRG00000003877	-	67	45.685	ENSPFOG00000021893	-	51	45.685	Poecilia_formosa
ENSNBRG00000003877	-	69	44.554	ENSPLAG00000023515	-	71	44.554	Poecilia_latipinna
ENSNBRG00000003877	-	88	62.121	ENSPLAG00000004362	-	92	62.121	Poecilia_latipinna
ENSNBRG00000003877	-	88	67.500	ENSPMEG00000012524	-	53	67.500	Poecilia_mexicana
ENSNBRG00000003877	-	69	45.050	ENSPMEG00000004356	-	71	45.050	Poecilia_mexicana
ENSNBRG00000003877	-	98	38.567	ENSPREG00000007470	-	91	44.086	Poecilia_reticulata
ENSNBRG00000003877	-	85	37.849	ENSPREG00000019242	-	66	37.849	Poecilia_reticulata
ENSNBRG00000003877	-	95	62.724	ENSPREG00000003560	-	86	62.724	Poecilia_reticulata
ENSNBRG00000003877	-	96	78.292	ENSPNYG00000021303	-	88	78.292	Pundamilia_nyererei
ENSNBRG00000003877	-	88	41.313	ENSPNYG00000001714	-	72	41.313	Pundamilia_nyererei
ENSNBRG00000003877	-	87	63.281	ENSPNYG00000021378	-	79	63.281	Pundamilia_nyererei
ENSNBRG00000003877	-	86	42.126	ENSPNYG00000013937	-	72	42.126	Pundamilia_nyererei
ENSNBRG00000003877	-	85	36.491	ENSSFOG00015001605	-	67	47.716	Scleropages_formosus
ENSNBRG00000003877	-	85	49.213	ENSSFOG00015012828	-	63	49.213	Scleropages_formosus
ENSNBRG00000003877	-	93	75.500	ENSSMAG00000007826	-	52	75.500	Scophthalmus_maximus
ENSNBRG00000003877	-	87	42.803	ENSSDUG00000001575	-	64	42.803	Seriola_dumerili
ENSNBRG00000003877	-	87	35.331	ENSSLDG00000005702	-	53	35.331	Seriola_lalandi_dorsalis
ENSNBRG00000003877	-	68	78.000	ENSSLDG00000005960	-	55	78.000	Seriola_lalandi_dorsalis
ENSNBRG00000003877	-	85	44.223	ENSTRUG00000004579	-	72	44.223	Takifugu_rubripes
ENSNBRG00000003877	-	84	40.000	ENSUAMG00000004120	-	64	40.000	Ursus_americanus
ENSNBRG00000003877	-	67	43.500	ENSXETG00000010161	parp14.3	65	43.500	Xenopus_tropicalis
ENSNBRG00000003877	-	98	40.404	ENSXCOG00000014707	-	83	40.404	Xiphophorus_couchianus
ENSNBRG00000003877	-	88	30.671	ENSXCOG00000006581	-	61	30.671	Xiphophorus_couchianus
ENSNBRG00000003877	-	56	41.818	ENSXCOG00000014714	-	76	41.818	Xiphophorus_couchianus
ENSNBRG00000003877	-	65	64.062	ENSXMAG00000010352	-	82	64.062	Xiphophorus_maculatus