EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004013 (Gene tree)
Gene ID: -
Gene Symbol: prpf38a
Alias: fa04h11|fc83e08|wu:fa04h11|wu:fc83e08|zgc:92059
Full Name: pre-mRNA-splicing factor 38A-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 8242 bases
Position: chrJH422378.1:582123-590364
Accession: 102798869
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005053	PRP38	PF03371.15	3.5e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005207	-	923	XM_006803609	ENSNBRP00000005053	307 (aa)	XP_006803672	-

Gene Model

Click here to download ENSNBRG00000004013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004013's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004013	prpf38a	74	84.416	ENSG00000134748	PRPF38A	71	85.068	Homo_sapiens
ENSNBRG00000004013	prpf38a	98	94.822	ENSAPOG00000011652	prpf38a	100	94.822	Acanthochromis_polyacanthus
ENSNBRG00000004013	prpf38a	74	84.416	ENSAMEG00000009319	PRPF38A	71	85.068	Ailuropoda_melanoleuca
ENSNBRG00000004013	prpf38a	98	95.695	ENSACIG00000012292	prpf38a	100	95.695	Amphilophus_citrinellus
ENSNBRG00000004013	prpf38a	98	94.822	ENSAOCG00000018004	prpf38a	100	94.822	Amphiprion_ocellaris
ENSNBRG00000004013	prpf38a	98	94.822	ENSAPEG00000021414	prpf38a	100	94.822	Amphiprion_percula
ENSNBRG00000004013	prpf38a	71	92.308	ENSATEG00000004608	prpf38a	72	92.308	Anabas_testudineus
ENSNBRG00000004013	prpf38a	53	81.928	ENSAPLG00000005827	PRPF38A	63	82.692	Anas_platyrhynchos
ENSNBRG00000004013	prpf38a	98	75.000	ENSACAG00000008249	PRPF38A	71	85.973	Anolis_carolinensis
ENSNBRG00000004013	prpf38a	98	55.663	ENSANAG00000029204	-	70	54.464	Aotus_nancymaae
ENSNBRG00000004013	prpf38a	74	84.416	ENSANAG00000027839	PRPF38A	71	85.068	Aotus_nancymaae
ENSNBRG00000004013	prpf38a	98	97.735	ENSACLG00000021595	prpf38a	100	97.735	Astatotilapia_calliptera
ENSNBRG00000004013	prpf38a	73	92.478	ENSAMXG00000029274	prpf38a	72	92.478	Astyanax_mexicanus
ENSNBRG00000004013	prpf38a	82	80.695	ENSBTAG00000002720	PRPF38A	75	85.068	Bos_taurus
ENSNBRG00000004013	prpf38a	63	62.051	WBGene00008380	prp-38	68	58.904	Caenorhabditis_elegans
ENSNBRG00000004013	prpf38a	82	80.695	ENSCJAG00000021594	PRPF38A	74	85.068	Callithrix_jacchus
ENSNBRG00000004013	prpf38a	74	84.416	ENSCAFG00000003740	PRPF38A	71	85.068	Canis_familiaris
ENSNBRG00000004013	prpf38a	74	84.416	ENSCAFG00020010939	PRPF38A	71	85.068	Canis_lupus_dingo
ENSNBRG00000004013	prpf38a	74	84.416	ENSCHIG00000024730	PRPF38A	71	85.068	Capra_hircus
ENSNBRG00000004013	prpf38a	61	80.319	ENSTSYG00000031994	-	63	80.899	Carlito_syrichta
ENSNBRG00000004013	prpf38a	74	84.416	ENSTSYG00000009868	-	71	85.068	Carlito_syrichta
ENSNBRG00000004013	prpf38a	98	82.581	ENSCPOG00000005079	PRPF38A	71	85.068	Cavia_porcellus
ENSNBRG00000004013	prpf38a	74	84.416	ENSCCAG00000026502	PRPF38A	71	85.068	Cebus_capucinus
ENSNBRG00000004013	prpf38a	98	53.896	ENSCATG00000044190	-	57	54.545	Cercocebus_atys
ENSNBRG00000004013	prpf38a	74	84.416	ENSCATG00000032296	PRPF38A	71	85.068	Cercocebus_atys
ENSNBRG00000004013	prpf38a	74	84.416	ENSCLAG00000005816	PRPF38A	71	85.068	Chinchilla_lanigera
ENSNBRG00000004013	prpf38a	74	84.848	ENSCPBG00000014791	PRPF38A	71	85.520	Chrysemys_picta_bellii
ENSNBRG00000004013	prpf38a	74	68.803	ENSCSAVG00000009580	-	71	70.968	Ciona_savignyi
ENSNBRG00000004013	prpf38a	74	84.416	ENSCANG00000032608	PRPF38A	74	85.068	Colobus_angolensis_palliatus
ENSNBRG00000004013	prpf38a	83	69.767	ENSCGRG00001002557	-	74	72.273	Cricetulus_griseus_chok1gshd
ENSNBRG00000004013	prpf38a	74	84.416	ENSCGRG00001018502	-	71	85.068	Cricetulus_griseus_chok1gshd
ENSNBRG00000004013	prpf38a	74	84.416	ENSCGRG00000014868	Prpf38a	71	85.068	Cricetulus_griseus_crigri
ENSNBRG00000004013	prpf38a	94	95.486	ENSCSEG00000001269	prpf38a	97	95.324	Cynoglossus_semilaevis
ENSNBRG00000004013	prpf38a	72	92.857	ENSCVAG00000012305	prpf38a	72	92.857	Cyprinodon_variegatus
ENSNBRG00000004013	prpf38a	73	90.708	ENSDARG00000039213	prpf38a	72	90.708	Danio_rerio
ENSNBRG00000004013	prpf38a	74	84.416	ENSDNOG00000042326	PRPF38A	72	85.068	Dasypus_novemcinctus
ENSNBRG00000004013	prpf38a	74	68.996	ENSDORG00000023857	-	66	68.950	Dipodomys_ordii
ENSNBRG00000004013	prpf38a	83	72.031	ENSDORG00000023691	-	75	77.523	Dipodomys_ordii
ENSNBRG00000004013	prpf38a	83	72.031	ENSDORG00000025371	-	75	77.523	Dipodomys_ordii
ENSNBRG00000004013	prpf38a	64	69.652	FBgn0050342	Prp38	57	71.809	Drosophila_melanogaster
ENSNBRG00000004013	prpf38a	76	78.243	ENSEBUG00000012588	prpf38a	71	78.027	Eptatretus_burgeri
ENSNBRG00000004013	prpf38a	74	84.416	ENSEASG00005014427	PRPF38A	71	85.068	Equus_asinus_asinus
ENSNBRG00000004013	prpf38a	74	84.416	ENSECAG00000022628	PRPF38A	71	85.068	Equus_caballus
ENSNBRG00000004013	prpf38a	71	91.892	ENSELUG00000021094	prpf38a	75	91.892	Esox_lucius
ENSNBRG00000004013	prpf38a	74	84.416	ENSFCAG00000002518	PRPF38A	71	85.068	Felis_catus
ENSNBRG00000004013	prpf38a	61	83.511	ENSFALG00000005598	-	66	84.270	Ficedula_albicollis
ENSNBRG00000004013	prpf38a	98	74.183	ENSFALG00000003612	-	73	81.651	Ficedula_albicollis
ENSNBRG00000004013	prpf38a	98	82.524	ENSFDAG00000011287	PRPF38A	72	85.068	Fukomys_damarensis
ENSNBRG00000004013	prpf38a	73	92.478	ENSFHEG00000014317	prpf38a	77	92.478	Fundulus_heteroclitus
ENSNBRG00000004013	prpf38a	53	95.181	ENSGMOG00000011384	prpf38a	54	95.181	Gadus_morhua
ENSNBRG00000004013	prpf38a	98	75.321	ENSGALG00000010627	PRPF38A	71	86.425	Gallus_gallus
ENSNBRG00000004013	prpf38a	71	92.760	ENSGAFG00000012422	prpf38a	72	92.760	Gambusia_affinis
ENSNBRG00000004013	prpf38a	71	92.377	ENSGACG00000005423	prpf38a	72	92.377	Gasterosteus_aculeatus
ENSNBRG00000004013	prpf38a	74	84.848	ENSGAGG00000020547	PRPF38A	71	85.520	Gopherus_agassizii
ENSNBRG00000004013	prpf38a	74	84.416	ENSGGOG00000003940	PRPF38A	71	85.068	Gorilla_gorilla
ENSNBRG00000004013	prpf38a	65	98.039	ENSHBUG00000020572	prpf38a	87	98.039	Haplochromis_burtoni
ENSNBRG00000004013	prpf38a	74	84.416	ENSHGLG00000000475	PRPF38A	71	85.068	Heterocephalus_glaber_female
ENSNBRG00000004013	prpf38a	98	73.616	ENSHGLG00000007918	-	71	73.636	Heterocephalus_glaber_female
ENSNBRG00000004013	prpf38a	98	73.616	ENSHGLG00100003928	-	71	73.636	Heterocephalus_glaber_male
ENSNBRG00000004013	prpf38a	74	84.416	ENSHGLG00100008935	PRPF38A	71	85.068	Heterocephalus_glaber_male
ENSNBRG00000004013	prpf38a	58	92.308	ENSHCOG00000020781	prpf38a	59	92.553	Hippocampus_comes
ENSNBRG00000004013	prpf38a	74	88.793	ENSIPUG00000005757	prpf38a	71	88.739	Ictalurus_punctatus
ENSNBRG00000004013	prpf38a	74	84.416	ENSSTOG00000015610	PRPF38A	71	85.068	Ictidomys_tridecemlineatus
ENSNBRG00000004013	prpf38a	74	83.983	ENSJJAG00000015811	Prpf38a	71	84.615	Jaculus_jaculus
ENSNBRG00000004013	prpf38a	71	92.793	ENSKMAG00000006588	prpf38a	72	92.793	Kryptolebias_marmoratus
ENSNBRG00000004013	prpf38a	94	86.395	ENSLBEG00000020585	prpf38a	72	91.892	Labrus_bergylta
ENSNBRG00000004013	prpf38a	73	85.841	ENSLACG00000011495	PRPF38A	72	85.841	Latimeria_chalumnae
ENSNBRG00000004013	prpf38a	98	84.790	ENSLOCG00000006262	prpf38a	73	87.665	Lepisosteus_oculatus
ENSNBRG00000004013	prpf38a	74	84.416	ENSLAFG00000025862	PRPF38A	71	85.068	Loxodonta_africana
ENSNBRG00000004013	prpf38a	82	80.695	ENSMFAG00000039449	PRPF38A	74	85.068	Macaca_fascicularis
ENSNBRG00000004013	prpf38a	61	81.383	ENSMMUG00000014333	PRPF38A	64	82.022	Macaca_mulatta
ENSNBRG00000004013	prpf38a	98	53.896	ENSMNEG00000040242	-	65	56.311	Macaca_nemestrina
ENSNBRG00000004013	prpf38a	74	84.416	ENSMNEG00000031221	PRPF38A	71	85.068	Macaca_nemestrina
ENSNBRG00000004013	prpf38a	74	84.416	ENSMLEG00000041105	PRPF38A	71	85.068	Mandrillus_leucophaeus
ENSNBRG00000004013	prpf38a	71	95.023	ENSMAMG00000015431	prpf38a	100	94.822	Mastacembelus_armatus
ENSNBRG00000004013	prpf38a	98	97.735	ENSMZEG00005017838	prpf38a	100	97.735	Maylandia_zebra
ENSNBRG00000004013	prpf38a	74	85.714	ENSMGAG00000011176	PRPF38A	74	86.425	Meleagris_gallopavo
ENSNBRG00000004013	prpf38a	84	75.379	ENSMAUG00000018029	-	84	80.995	Mesocricetus_auratus
ENSNBRG00000004013	prpf38a	74	84.416	ENSMICG00000014193	PRPF38A	71	85.068	Microcebus_murinus
ENSNBRG00000004013	prpf38a	74	84.416	ENSMOCG00000013080	Prpf38a	71	85.068	Microtus_ochrogaster
ENSNBRG00000004013	prpf38a	83	91.051	ENSMMOG00000016972	prpf38a	90	91.051	Mola_mola
ENSNBRG00000004013	prpf38a	74	82.328	ENSMODG00000000644	PRPF38A	71	82.883	Monodelphis_domestica
ENSNBRG00000004013	prpf38a	71	94.595	ENSMALG00000019363	prpf38a	70	94.595	Monopterus_albus
ENSNBRG00000004013	prpf38a	74	83.983	MGP_CAROLIEiJ_G0026269	Prpf38a	71	84.615	Mus_caroli
ENSNBRG00000004013	prpf38a	74	83.983	ENSMUSG00000063800	Prpf38a	71	84.615	Mus_musculus
ENSNBRG00000004013	prpf38a	74	83.983	MGP_PahariEiJ_G0028602	Prpf38a	71	84.615	Mus_pahari
ENSNBRG00000004013	prpf38a	74	83.983	MGP_SPRETEiJ_G0027238	Prpf38a	93	88.830	Mus_spretus
ENSNBRG00000004013	prpf38a	74	84.416	ENSMPUG00000006896	PRPF38A	71	85.068	Mustela_putorius_furo
ENSNBRG00000004013	prpf38a	98	83.442	ENSNGAG00000011884	Prpf38a	72	85.068	Nannospalax_galili
ENSNBRG00000004013	prpf38a	99	52.244	ENSNLEG00000033398	-	60	49.770	Nomascus_leucogenys
ENSNBRG00000004013	prpf38a	95	56.146	ENSNLEG00000012592	-	67	55.000	Nomascus_leucogenys
ENSNBRG00000004013	prpf38a	67	83.173	ENSNLEG00000017999	PRPF38A	63	83.838	Nomascus_leucogenys
ENSNBRG00000004013	prpf38a	74	80.952	ENSMEUG00000003860	PRPF38A	71	81.448	Notamacropus_eugenii
ENSNBRG00000004013	prpf38a	73	84.649	ENSOPRG00000008985	PRPF38A	92	85.068	Ochotona_princeps
ENSNBRG00000004013	prpf38a	74	84.416	ENSODEG00000005869	PRPF38A	71	85.068	Octodon_degus
ENSNBRG00000004013	prpf38a	98	96.764	ENSONIG00000007816	prpf38a	100	96.764	Oreochromis_niloticus
ENSNBRG00000004013	prpf38a	74	45.259	ENSOANG00000009541	-	71	43.946	Ornithorhynchus_anatinus
ENSNBRG00000004013	prpf38a	74	84.416	ENSOCUG00000000963	PRPF38A	71	85.068	Oryctolagus_cuniculus
ENSNBRG00000004013	prpf38a	94	85.714	ENSORLG00000013485	prpf38a	79	91.441	Oryzias_latipes
ENSNBRG00000004013	prpf38a	94	85.714	ENSORLG00020002130	prpf38a	79	91.441	Oryzias_latipes_hni
ENSNBRG00000004013	prpf38a	94	85.374	ENSORLG00015021393	prpf38a	75	90.991	Oryzias_latipes_hsok
ENSNBRG00000004013	prpf38a	94	86.054	ENSOMEG00000016333	prpf38a	72	91.892	Oryzias_melastigma
ENSNBRG00000004013	prpf38a	74	84.416	ENSOGAG00000005423	PRPF38A	71	85.068	Otolemur_garnettii
ENSNBRG00000004013	prpf38a	74	84.416	ENSOARG00000005373	PRPF38A	71	85.068	Ovis_aries
ENSNBRG00000004013	prpf38a	98	65.916	ENSPPAG00000033867	-	68	66.818	Pan_paniscus
ENSNBRG00000004013	prpf38a	74	84.416	ENSPPAG00000030905	PRPF38A	71	85.068	Pan_paniscus
ENSNBRG00000004013	prpf38a	74	84.416	ENSPPRG00000013268	PRPF38A	71	85.068	Panthera_pardus
ENSNBRG00000004013	prpf38a	74	84.416	ENSPTIG00000015419	PRPF38A	71	85.068	Panthera_tigris_altaica
ENSNBRG00000004013	prpf38a	82	80.695	ENSPTRG00000000739	PRPF38A	74	85.068	Pan_troglodytes
ENSNBRG00000004013	prpf38a	74	84.416	ENSPANG00000015483	PRPF38A	71	85.068	Papio_anubis
ENSNBRG00000004013	prpf38a	98	85.714	ENSPKIG00000011439	prpf38a	72	90.991	Paramormyrops_kingsleyae
ENSNBRG00000004013	prpf38a	74	85.281	ENSPSIG00000017487	PRPF38A	71	85.973	Pelodiscus_sinensis
ENSNBRG00000004013	prpf38a	70	91.628	ENSPMGG00000021352	prpf38a	76	91.324	Periophthalmus_magnuspinnatus
ENSNBRG00000004013	prpf38a	98	73.248	ENSPEMG00000011212	-	70	78.829	Peromyscus_maniculatus_bairdii
ENSNBRG00000004013	prpf38a	74	84.416	ENSPEMG00000023277	-	71	85.068	Peromyscus_maniculatus_bairdii
ENSNBRG00000004013	prpf38a	74	81.897	ENSPCIG00000022369	-	71	82.432	Phascolarctos_cinereus
ENSNBRG00000004013	prpf38a	82	83.398	ENSPFOG00000004248	prpf38a	72	92.760	Poecilia_formosa
ENSNBRG00000004013	prpf38a	83	80.989	ENSPLAG00000010328	prpf38a	72	92.760	Poecilia_latipinna
ENSNBRG00000004013	prpf38a	83	80.989	ENSPMEG00000011804	prpf38a	72	92.760	Poecilia_mexicana
ENSNBRG00000004013	prpf38a	83	79.323	ENSPREG00000002835	prpf38a	58	94.681	Poecilia_reticulata
ENSNBRG00000004013	prpf38a	74	73.729	ENSPPYG00000001348	PRPF38A	71	73.894	Pongo_abelii
ENSNBRG00000004013	prpf38a	74	84.848	ENSPCAG00000013328	PRPF38A	71	85.520	Procavia_capensis
ENSNBRG00000004013	prpf38a	98	65.033	ENSPCOG00000020709	-	73	71.946	Propithecus_coquereli
ENSNBRG00000004013	prpf38a	74	84.416	ENSPCOG00000016387	-	71	85.068	Propithecus_coquereli
ENSNBRG00000004013	prpf38a	74	84.416	ENSPVAG00000009803	PRPF38A	71	85.068	Pteropus_vampyrus
ENSNBRG00000004013	prpf38a	98	97.735	ENSPNYG00000005571	prpf38a	100	97.735	Pundamilia_nyererei
ENSNBRG00000004013	prpf38a	73	92.035	ENSPNAG00000010399	prpf38a	72	92.035	Pygocentrus_nattereri
ENSNBRG00000004013	prpf38a	74	84.848	ENSRNOG00000009451	Prpf38a	71	85.520	Rattus_norvegicus
ENSNBRG00000004013	prpf38a	98	51.780	ENSRBIG00000034053	-	64	71.311	Rhinopithecus_bieti
ENSNBRG00000004013	prpf38a	74	84.416	ENSRBIG00000036442	PRPF38A	74	85.068	Rhinopithecus_bieti
ENSNBRG00000004013	prpf38a	96	67.987	ENSRROG00000040003	-	72	69.231	Rhinopithecus_roxellana
ENSNBRG00000004013	prpf38a	74	84.416	ENSRROG00000032788	PRPF38A	71	85.068	Rhinopithecus_roxellana
ENSNBRG00000004013	prpf38a	74	84.416	ENSSBOG00000019515	PRPF38A	71	85.068	Saimiri_boliviensis_boliviensis
ENSNBRG00000004013	prpf38a	79	70.732	ENSSHAG00000006029	-	74	74.661	Sarcophilus_harrisii
ENSNBRG00000004013	prpf38a	61	78.836	ENSSHAG00000006906	-	66	79.330	Sarcophilus_harrisii
ENSNBRG00000004013	prpf38a	98	85.113	ENSSFOG00015013572	prpf38a	72	89.189	Scleropages_formosus
ENSNBRG00000004013	prpf38a	71	93.243	ENSSMAG00000015379	prpf38a	72	93.243	Scophthalmus_maximus
ENSNBRG00000004013	prpf38a	71	94.144	ENSSDUG00000001324	prpf38a	100	94.175	Seriola_dumerili
ENSNBRG00000004013	prpf38a	71	94.144	ENSSLDG00000014803	prpf38a	100	94.175	Seriola_lalandi_dorsalis
ENSNBRG00000004013	prpf38a	57	97.674	ENSSARG00000014458	PRPF38A	71	62.896	Sorex_araneus
ENSNBRG00000004013	prpf38a	74	87.013	ENSSPUG00000013259	PRPF38A	71	87.783	Sphenodon_punctatus
ENSNBRG00000004013	prpf38a	98	83.775	ENSSPAG00000010449	prpf38a	100	83.775	Stegastes_partitus
ENSNBRG00000004013	prpf38a	74	84.416	ENSSSCG00000028288	PRPF38A	71	85.068	Sus_scrofa
ENSNBRG00000004013	prpf38a	74	81.385	ENSTGUG00000008995	PRPF38A	71	81.900	Taeniopygia_guttata
ENSNBRG00000004013	prpf38a	71	91.892	ENSTRUG00000003374	prpf38a	68	91.892	Takifugu_rubripes
ENSNBRG00000004013	prpf38a	71	91.071	ENSTNIG00000005533	prpf38a	72	91.071	Tetraodon_nigroviridis
ENSNBRG00000004013	prpf38a	74	84.416	ENSTBEG00000000725	PRPF38A	71	85.068	Tupaia_belangeri
ENSNBRG00000004013	prpf38a	74	84.416	ENSTTRG00000016139	PRPF38A	71	85.068	Tursiops_truncatus
ENSNBRG00000004013	prpf38a	74	84.416	ENSUAMG00000000625	PRPF38A	71	85.068	Ursus_americanus
ENSNBRG00000004013	prpf38a	74	84.416	ENSUMAG00000022674	PRPF38A	71	85.068	Ursus_maritimus
ENSNBRG00000004013	prpf38a	74	83.983	ENSVPAG00000000907	PRPF38A	71	84.615	Vicugna_pacos
ENSNBRG00000004013	prpf38a	74	84.416	ENSVVUG00000004475	PRPF38A	71	85.068	Vulpes_vulpes
ENSNBRG00000004013	prpf38a	71	85.068	ENSXETG00000008060	prpf38a	71	85.068	Xenopus_tropicalis
ENSNBRG00000004013	prpf38a	71	93.182	ENSXCOG00000007393	prpf38a	74	93.182	Xiphophorus_couchianus
ENSNBRG00000004013	prpf38a	71	92.760	ENSXMAG00000026143	prpf38a	72	92.760	Xiphophorus_maculatus