EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004017 (Gene tree)
Gene ID: 102789170
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 8097 bases
Position: chrJH422414.1:911715-919811
Accession: 102789170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005073	PARP	PF00644.20	2.3e-28	1	1
ENSNBRP00000005061	PARP	PF00644.20	7.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005227	-	645	XM_006805524	ENSNBRP00000005073	214 (aa)	XP_006805587	-
ENSNBRT00000005215	-	834	-	ENSNBRP00000005061	277 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000004017's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004017's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004017	-	89	85.864	ENSNBRG00000004048	-	100	85.864
ENSNBRG00000004017	-	90	39.896	ENSNBRG00000003116	-	63	39.086
ENSNBRG00000004017	-	90	44.845	ENSNBRG00000002998	-	72	42.289
ENSNBRG00000004017	-	82	32.292	ENSNBRG00000005708	parp11	77	30.769
ENSNBRG00000004017	-	91	30.047	ENSNBRG00000005665	PARP11	71	30.516
ENSNBRG00000004017	-	86	31.892	ENSNBRG00000010331	-	79	31.892
ENSNBRG00000004017	-	100	78.276	ENSNBRG00000003877	-	98	78.276
ENSNBRG00000004017	-	91	48.454	ENSNBRG00000005232	-	55	42.748

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004017	-	88	67.623	ENSAPOG00000007412	-	85	67.623	Acanthochromis_polyacanthus
ENSNBRG00000004017	-	91	50.000	ENSAPOG00000021642	-	54	43.182	Acanthochromis_polyacanthus
ENSNBRG00000004017	-	91	48.980	ENSACIG00000020176	-	70	48.980	Amphilophus_citrinellus
ENSNBRG00000004017	-	91	84.615	ENSACIG00000009912	-	89	77.465	Amphilophus_citrinellus
ENSNBRG00000004017	-	91	83.590	ENSACIG00000009927	-	95	83.590	Amphilophus_citrinellus
ENSNBRG00000004017	-	99	38.062	ENSACIG00000003944	si:ch211-219a4.3	67	39.921	Amphilophus_citrinellus
ENSNBRG00000004017	-	90	66.667	ENSAOCG00000002980	-	83	64.479	Amphiprion_ocellaris
ENSNBRG00000004017	-	91	49.744	ENSAPEG00000001687	-	54	42.205	Amphiprion_percula
ENSNBRG00000004017	-	100	77.674	ENSACLG00000013170	-	99	77.674	Astatotilapia_calliptera
ENSNBRG00000004017	-	91	44.845	ENSACLG00000005418	-	79	41.732	Astatotilapia_calliptera
ENSNBRG00000004017	-	91	48.969	ENSACLG00000001129	-	52	41.767	Astatotilapia_calliptera
ENSNBRG00000004017	-	91	86.154	ENSACLG00000013093	-	86	76.241	Astatotilapia_calliptera
ENSNBRG00000004017	-	90	48.087	ENSCSEG00000017936	si:ch211-219a4.3	69	42.748	Cynoglossus_semilaevis
ENSNBRG00000004017	-	90	53.368	ENSCSEG00000020071	-	73	46.538	Cynoglossus_semilaevis
ENSNBRG00000004017	-	91	72.308	ENSCVAG00000014329	-	81	66.148	Cyprinodon_variegatus
ENSNBRG00000004017	-	91	47.423	ENSCVAG00000017520	-	82	47.423	Cyprinodon_variegatus
ENSNBRG00000004017	-	91	63.590	ENSDARG00000099377	si:cabz01030277.1	50	62.162	Danio_rerio
ENSNBRG00000004017	-	91	63.077	ENSDARG00000105415	si:ch211-163c2.1	51	62.703	Danio_rerio
ENSNBRG00000004017	-	91	67.526	ENSFHEG00000008820	-	85	67.526	Fundulus_heteroclitus
ENSNBRG00000004017	-	91	42.647	ENSGMOG00000011231	-	79	37.262	Gadus_morhua
ENSNBRG00000004017	-	91	47.423	ENSGAFG00000001814	-	70	39.544	Gambusia_affinis
ENSNBRG00000004017	-	91	70.256	ENSGAFG00000002533	-	82	62.452	Gambusia_affinis
ENSNBRG00000004017	-	91	46.392	ENSHBUG00000005369	-	72	42.629	Haplochromis_burtoni
ENSNBRG00000004017	-	91	48.454	ENSHBUG00000018235	-	55	42.748	Haplochromis_burtoni
ENSNBRG00000004017	-	87	78.075	ENSKMAG00000012870	-	81	69.373	Kryptolebias_marmoratus
ENSNBRG00000004017	-	96	68.613	ENSKMAG00000003908	-	89	68.613	Kryptolebias_marmoratus
ENSNBRG00000004017	-	89	45.312	ENSLACG00000009107	-	93	45.312	Latimeria_chalumnae
ENSNBRG00000004017	-	91	67.526	ENSMZEG00005026601	-	79	60.618	Maylandia_zebra
ENSNBRG00000004017	-	91	47.692	ENSMZEG00005025678	si:ch211-219a4.3	72	43.307	Maylandia_zebra
ENSNBRG00000004017	-	91	38.265	ENSMODG00000007157	-	67	35.981	Monodelphis_domestica
ENSNBRG00000004017	-	74	69.620	ENSMALG00000017146	-	82	66.467	Monopterus_albus
ENSNBRG00000004017	-	82	65.909	ENSMALG00000000434	-	86	65.909	Monopterus_albus
ENSNBRG00000004017	-	99	49.171	ENSONIG00000004517	-	51	49.171	Oreochromis_niloticus
ENSNBRG00000004017	-	90	78.462	ENSONIG00000017776	-	77	78.462	Oreochromis_niloticus
ENSNBRG00000004017	-	91	77.436	ENSORLG00015003387	-	75	69.884	Oryzias_latipes_hsok
ENSNBRG00000004017	-	90	46.739	ENSORLG00015021971	si:ch211-219a4.3	73	41.985	Oryzias_latipes_hsok
ENSNBRG00000004017	-	92	75.127	ENSOMEG00000016380	-	77	68.966	Oryzias_melastigma
ENSNBRG00000004017	-	91	76.923	ENSOMEG00000016395	-	82	68.561	Oryzias_melastigma
ENSNBRG00000004017	-	91	69.072	ENSOMEG00000016408	-	59	69.072	Oryzias_melastigma
ENSNBRG00000004017	-	83	75.706	ENSOMEG00000016369	-	75	68.145	Oryzias_melastigma
ENSNBRG00000004017	-	91	45.641	ENSOMEG00000019715	si:ch211-219a4.3	72	41.732	Oryzias_melastigma
ENSNBRG00000004017	-	90	46.907	ENSPKIG00000004135	-	54	46.907	Paramormyrops_kingsleyae
ENSNBRG00000004017	-	90	48.705	ENSPMGG00000004482	-	69	40.310	Periophthalmus_magnuspinnatus
ENSNBRG00000004017	-	91	57.436	ENSPMGG00000017987	-	89	57.436	Periophthalmus_magnuspinnatus
ENSNBRG00000004017	-	91	47.179	ENSPFOG00000021893	-	50	47.179	Poecilia_formosa
ENSNBRG00000004017	-	87	72.193	ENSPLAG00000004362	-	92	68.093	Poecilia_latipinna
ENSNBRG00000004017	-	91	47.423	ENSPLAG00000023515	-	68	47.423	Poecilia_latipinna
ENSNBRG00000004017	-	91	47.938	ENSPMEG00000004356	-	68	47.938	Poecilia_mexicana
ENSNBRG00000004017	-	91	47.692	ENSPREG00000019242	-	66	40.000	Poecilia_reticulata
ENSNBRG00000004017	-	91	47.938	ENSPREG00000007470	-	88	48.045	Poecilia_reticulata
ENSNBRG00000004017	-	92	69.388	ENSPREG00000003560	-	80	63.019	Poecilia_reticulata
ENSNBRG00000004017	-	91	67.010	ENSPNYG00000021378	-	79	60.232	Pundamilia_nyererei
ENSNBRG00000004017	-	86	47.027	ENSPNYG00000001714	-	70	44.628	Pundamilia_nyererei
ENSNBRG00000004017	-	91	47.179	ENSPNYG00000013937	-	72	42.913	Pundamilia_nyererei
ENSNBRG00000004017	-	91	84.615	ENSPNYG00000021303	-	89	74.296	Pundamilia_nyererei
ENSNBRG00000004017	-	92	48.485	ENSSFOG00015001605	-	68	48.485	Scleropages_formosus
ENSNBRG00000004017	-	91	54.872	ENSSFOG00015012828	-	63	47.471	Scleropages_formosus
ENSNBRG00000004017	-	91	81.026	ENSSMAG00000007826	-	51	79.459	Scophthalmus_maximus
ENSNBRG00000004017	-	90	48.187	ENSSDUG00000001575	-	64	41.132	Seriola_dumerili
ENSNBRG00000004017	-	91	81.538	ENSSLDG00000005960	-	54	81.538	Seriola_lalandi_dorsalis
ENSNBRG00000004017	-	91	47.179	ENSTRUG00000004579	-	72	43.426	Takifugu_rubripes
ENSNBRG00000004017	-	91	45.128	ENSUAMG00000004120	-	66	41.473	Ursus_americanus
ENSNBRG00000004017	-	94	45.854	ENSXETG00000010161	parp14.3	67	45.854	Xenopus_tropicalis
ENSNBRG00000004017	-	77	43.636	ENSXCOG00000014714	-	76	43.636	Xiphophorus_couchianus
ENSNBRG00000004017	-	91	48.718	ENSXCOG00000014707	-	71	43.307	Xiphophorus_couchianus
ENSNBRG00000004017	-	87	67.742	ENSXMAG00000010352	-	80	67.742	Xiphophorus_maculatus