EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSNBRG00000004048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 2589 bases
Position: chrJH422414.1:953874-956462
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005092	PARP	PF00644.20	4.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005246	-	567	-	ENSNBRP00000005092	188 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000004048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSNBRG00000004048	-	100	85.864	ENSNBRG00000004017	-	89	85.864
ENSNBRG00000004048	-	95	41.341	ENSNBRG00000003116	-	57	41.341
ENSNBRG00000004048	-	96	43.243	ENSNBRG00000002998	-	67	43.243
ENSNBRG00000004048	-	83	33.758	ENSNBRG00000010331	-	67	33.758
ENSNBRG00000004048	-	91	34.375	ENSNBRG00000005708	parp11	68	34.375
ENSNBRG00000004048	-	99	32.367	ENSNBRG00000005665	PARP11	70	32.850
ENSNBRG00000004048	-	100	78.534	ENSNBRG00000003877	-	65	78.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004048	-	82	79.355	ENSAPOG00000007412	-	57	79.355	Acanthochromis_polyacanthus
ENSNBRG00000004048	-	95	46.703	ENSACIG00000020176	-	65	46.703	Amphilophus_citrinellus
ENSNBRG00000004048	-	100	80.628	ENSACIG00000009912	-	60	80.628	Amphilophus_citrinellus
ENSNBRG00000004048	-	100	79.058	ENSACIG00000009927	-	93	79.058	Amphilophus_citrinellus
ENSNBRG00000004048	-	97	66.667	ENSAOCG00000002980	-	60	66.667	Amphiprion_ocellaris
ENSNBRG00000004048	-	100	90.957	ENSACLG00000013170	-	87	90.957	Astatotilapia_calliptera
ENSNBRG00000004048	-	100	43.229	ENSACLG00000005418	-	57	43.784	Astatotilapia_calliptera
ENSNBRG00000004048	-	100	90.052	ENSACLG00000013093	-	58	90.052	Astatotilapia_calliptera
ENSNBRG00000004048	-	100	44.271	ENSCSEG00000017936	si:ch211-219a4.3	51	44.271	Cynoglossus_semilaevis
ENSNBRG00000004048	-	97	52.941	ENSCSEG00000020071	-	53	52.941	Cynoglossus_semilaevis
ENSNBRG00000004048	-	97	45.699	ENSCVAG00000017520	-	79	45.699	Cyprinodon_variegatus
ENSNBRG00000004048	-	100	75.000	ENSCVAG00000014329	-	59	75.000	Cyprinodon_variegatus
ENSNBRG00000004048	-	99	62.632	ENSFHEG00000008820	-	83	62.632	Fundulus_heteroclitus
ENSNBRG00000004048	-	98	40.102	ENSGMOG00000011231	-	59	40.102	Gadus_morhua
ENSNBRG00000004048	-	100	70.157	ENSGAFG00000002533	-	61	70.157	Gambusia_affinis
ENSNBRG00000004048	-	100	44.792	ENSHBUG00000005369	-	55	44.792	Haplochromis_burtoni
ENSNBRG00000004048	-	97	77.838	ENSKMAG00000012870	-	56	77.838	Kryptolebias_marmoratus
ENSNBRG00000004048	-	97	77.297	ENSKMAG00000003908	-	60	77.297	Kryptolebias_marmoratus
ENSNBRG00000004048	-	96	43.478	ENSLACG00000009107	-	89	43.478	Latimeria_chalumnae
ENSNBRG00000004048	-	99	64.737	ENSMZEG00005026601	-	66	64.737	Maylandia_zebra
ENSNBRG00000004048	-	95	47.253	ENSMZEG00005025678	si:ch211-219a4.3	52	46.995	Maylandia_zebra
ENSNBRG00000004048	-	95	36.216	ENSMODG00000007157	-	58	36.216	Monodelphis_domestica
ENSNBRG00000004048	-	92	65.318	ENSMALG00000000434	-	86	65.318	Monopterus_albus
ENSNBRG00000004048	-	89	65.868	ENSMALG00000017146	-	82	65.868	Monopterus_albus
ENSNBRG00000004048	-	100	74.869	ENSORLG00015003387	-	56	74.869	Oryzias_latipes_hsok
ENSNBRG00000004048	-	100	45.312	ENSORLG00015021971	si:ch211-219a4.3	52	46.486	Oryzias_latipes_hsok
ENSNBRG00000004048	-	100	44.503	ENSOMEG00000019715	si:ch211-219a4.3	54	44.503	Oryzias_melastigma
ENSNBRG00000004048	-	93	72.881	ENSOMEG00000016369	-	55	72.881	Oryzias_melastigma
ENSNBRG00000004048	-	100	73.822	ENSOMEG00000016395	-	60	73.822	Oryzias_melastigma
ENSNBRG00000004048	-	99	67.368	ENSOMEG00000016408	-	58	67.368	Oryzias_melastigma
ENSNBRG00000004048	-	100	73.298	ENSOMEG00000016380	-	57	73.298	Oryzias_melastigma
ENSNBRG00000004048	-	99	45.026	ENSPKIG00000004135	-	54	45.026	Paramormyrops_kingsleyae
ENSNBRG00000004048	-	100	56.614	ENSPMGG00000017987	-	87	56.614	Periophthalmus_magnuspinnatus
ENSNBRG00000004048	-	97	71.892	ENSPLAG00000004362	-	67	71.892	Poecilia_latipinna
ENSNBRG00000004048	-	95	45.304	ENSPLAG00000023515	-	64	45.304	Poecilia_latipinna
ENSNBRG00000004048	-	95	45.856	ENSPMEG00000004356	-	64	45.856	Poecilia_mexicana
ENSNBRG00000004048	-	100	70.157	ENSPREG00000003560	-	59	70.157	Poecilia_reticulata
ENSNBRG00000004048	-	95	45.856	ENSPREG00000007470	-	87	44.318	Poecilia_reticulata
ENSNBRG00000004048	-	100	90.052	ENSPNYG00000021303	-	60	90.052	Pundamilia_nyererei
ENSNBRG00000004048	-	99	64.737	ENSPNYG00000021378	-	58	64.737	Pundamilia_nyererei
ENSNBRG00000004048	-	96	46.154	ENSPNYG00000001714	-	52	46.154	Pundamilia_nyererei
ENSNBRG00000004048	-	95	46.703	ENSPNYG00000013937	-	52	46.448	Pundamilia_nyererei
ENSNBRG00000004048	-	95	48.901	ENSSFOG00015001605	-	63	48.901	Scleropages_formosus
ENSNBRG00000004048	-	100	78.010	ENSSLDG00000005960	-	53	78.010	Seriola_lalandi_dorsalis
ENSNBRG00000004048	-	95	43.407	ENSTRUG00000004579	-	52	43.407	Takifugu_rubripes
ENSNBRG00000004048	-	96	45.989	ENSXETG00000010161	parp14.3	61	45.989	Xenopus_tropicalis
ENSNBRG00000004048	-	82	45.161	ENSXCOG00000014714	-	71	45.161	Xiphophorus_couchianus
ENSNBRG00000004048	-	100	44.503	ENSXCOG00000014707	-	53	44.503	Xiphophorus_couchianus
ENSNBRG00000004048	-	96	66.667	ENSXMAG00000010352	-	79	66.667	Xiphophorus_maculatus