EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSNBRG00000004053 (Gene tree)
Gene ID: -
Gene Symbol: trmt1l
Alias: im:7142104|si:dkeyp-11g8.5
Full Name: tRNA methyltransferase 1-like
Gene Type: protein_coding
Species: Neolamprologus_brichardi
Status: putative
Strand: Plus strand
Length: 19369 bases
Position: chrJH422378.1:593127-612495
Accession: ZDB-GENE-041014-189
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSNBRP00000005194	TRM	PF02005.16	1.8e-42	1	1
ENSNBRP00000005164	TRM	PF02005.16	9e-18	1	2
ENSNBRP00000005164	TRM	PF02005.16	9e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSNBRT00000005364	-	474	-	ENSNBRP00000005207	157 (aa)	-	-
ENSNBRT00000005321	-	1359	-	ENSNBRP00000005164	453 (aa)	-	-
ENSNBRT00000005351	-	1590	-	ENSNBRP00000005194	529 (aa)	-	-

Gene Model

Click here to download ENSNBRG00000004053's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSNBRG00000004053's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSNBRG00000004053	trmt1l	93	65.101	ENSG00000121486	TRMT1L	95	69.802	Homo_sapiens
ENSNBRG00000004053	trmt1l	100	88.889	ENSAPOG00000011807	trmt1l	74	88.889	Acanthochromis_polyacanthus
ENSNBRG00000004053	trmt1l	93	66.443	ENSAMEG00000013538	TRMT1L	65	63.235	Ailuropoda_melanoleuca
ENSNBRG00000004053	trmt1l	65	88.950	ENSACIG00000012049	trmt1l	74	88.950	Amphilophus_citrinellus
ENSNBRG00000004053	trmt1l	100	87.654	ENSAOCG00000018112	trmt1l	78	83.740	Amphiprion_ocellaris
ENSNBRG00000004053	trmt1l	100	88.272	ENSAPEG00000021433	trmt1l	78	84.458	Amphiprion_percula
ENSNBRG00000004053	trmt1l	97	90.123	ENSATEG00000004573	trmt1l	79	85.892	Anabas_testudineus
ENSNBRG00000004053	trmt1l	94	68.790	ENSAPLG00000008394	TRMT1L	64	69.565	Anas_platyrhynchos
ENSNBRG00000004053	trmt1l	84	64.195	ENSACAG00000002342	TRMT1L	65	64.195	Anolis_carolinensis
ENSNBRG00000004053	trmt1l	93	66.443	ENSANAG00000038162	TRMT1L	62	66.667	Aotus_nancymaae
ENSNBRG00000004053	trmt1l	100	96.914	ENSACLG00000021625	trmt1l	74	96.914	Astatotilapia_calliptera
ENSNBRG00000004053	trmt1l	86	76.923	ENSAMXG00000009602	trmt1l	74	77.844	Astyanax_mexicanus
ENSNBRG00000004053	trmt1l	94	68.919	ENSBTAG00000011285	TRMT1L	61	69.032	Bos_taurus
ENSNBRG00000004053	trmt1l	93	65.101	ENSCJAG00000005456	TRMT1L	66	62.004	Callithrix_jacchus
ENSNBRG00000004053	trmt1l	93	67.114	ENSCAFG00000013518	TRMT1L	60	67.308	Canis_familiaris
ENSNBRG00000004053	trmt1l	93	67.114	ENSCAFG00020015640	TRMT1L	61	67.308	Canis_lupus_dingo
ENSNBRG00000004053	trmt1l	93	68.456	ENSCHIG00000016522	TRMT1L	61	68.590	Capra_hircus
ENSNBRG00000004053	trmt1l	94	65.132	ENSTSYG00000010465	TRMT1L	63	66.026	Carlito_syrichta
ENSNBRG00000004053	trmt1l	76	62.774	ENSCAPG00000012562	TRMT1L	56	63.235	Cavia_aperea
ENSNBRG00000004053	trmt1l	93	65.772	ENSCPOG00000001567	TRMT1L	63	66.026	Cavia_porcellus
ENSNBRG00000004053	trmt1l	93	66.443	ENSCCAG00000018699	TRMT1L	62	66.667	Cebus_capucinus
ENSNBRG00000004053	trmt1l	93	66.443	ENSCATG00000043114	TRMT1L	65	63.048	Cercocebus_atys
ENSNBRG00000004053	trmt1l	94	41.818	ENSCLAG00000010853	-	60	50.655	Chinchilla_lanigera
ENSNBRG00000004053	trmt1l	93	67.114	ENSCLAG00000010801	-	63	67.308	Chinchilla_lanigera
ENSNBRG00000004053	trmt1l	93	66.443	ENSCSAG00000012880	TRMT1L	65	63.048	Chlorocebus_sabaeus
ENSNBRG00000004053	trmt1l	58	75.294	ENSCHOG00000011164	TRMT1L	56	69.388	Choloepus_hoffmanni
ENSNBRG00000004053	trmt1l	97	69.872	ENSCPBG00000015694	TRMT1L	70	64.612	Chrysemys_picta_bellii
ENSNBRG00000004053	trmt1l	94	65.789	ENSCANG00000031107	TRMT1L	65	63.048	Colobus_angolensis_palliatus
ENSNBRG00000004053	trmt1l	94	66.447	ENSCGRG00001019297	Trmt1l	62	67.308	Cricetulus_griseus_chok1gshd
ENSNBRG00000004053	trmt1l	94	66.447	ENSCGRG00000005036	Trmt1l	64	67.308	Cricetulus_griseus_crigri
ENSNBRG00000004053	trmt1l	100	84.568	ENSCSEG00000001248	trmt1l	74	84.568	Cynoglossus_semilaevis
ENSNBRG00000004053	trmt1l	99	86.076	ENSCVAG00000012274	trmt1l	74	86.420	Cyprinodon_variegatus
ENSNBRG00000004053	trmt1l	86	77.328	ENSDARG00000042057	trmt1l	75	76.907	Danio_rerio
ENSNBRG00000004053	trmt1l	93	65.772	ENSDNOG00000005239	TRMT1L	65	63.025	Dasypus_novemcinctus
ENSNBRG00000004053	trmt1l	94	64.331	ENSDORG00000003298	Trmt1l	61	65.217	Dipodomys_ordii
ENSNBRG00000004053	trmt1l	93	52.703	ENSEBUG00000010301	trmt1l	70	53.947	Eptatretus_burgeri
ENSNBRG00000004053	trmt1l	94	67.105	ENSEASG00005005551	TRMT1L	61	68.276	Equus_asinus_asinus
ENSNBRG00000004053	trmt1l	94	67.105	ENSECAG00000020999	TRMT1L	58	67.949	Equus_caballus
ENSNBRG00000004053	trmt1l	79	74.118	ENSEEUG00000014110	TRMT1L	57	75.281	Erinaceus_europaeus
ENSNBRG00000004053	trmt1l	99	77.711	ENSELUG00000020587	trmt1l	75	77.711	Esox_lucius
ENSNBRG00000004053	trmt1l	94	66.225	ENSFCAG00000011285	TRMT1L	62	67.097	Felis_catus
ENSNBRG00000004053	trmt1l	94	69.565	ENSFALG00000003177	TRMT1L	76	62.600	Ficedula_albicollis
ENSNBRG00000004053	trmt1l	94	65.789	ENSFDAG00000008822	TRMT1L	63	66.667	Fukomys_damarensis
ENSNBRG00000004053	trmt1l	77	87.975	ENSFHEG00000014328	trmt1l	77	83.659	Fundulus_heteroclitus
ENSNBRG00000004053	trmt1l	94	79.747	ENSGMOG00000009535	trmt1l	79	78.439	Gadus_morhua
ENSNBRG00000004053	trmt1l	98	66.460	ENSGALG00000033077	TRMT1L	61	66.460	Gallus_gallus
ENSNBRG00000004053	trmt1l	99	85.987	ENSGAFG00000012445	trmt1l	74	86.335	Gambusia_affinis
ENSNBRG00000004053	trmt1l	94	87.179	ENSGACG00000005050	trmt1l	77	84.848	Gasterosteus_aculeatus
ENSNBRG00000004053	trmt1l	97	69.231	ENSGAGG00000007441	TRMT1L	61	70.886	Gopherus_agassizii
ENSNBRG00000004053	trmt1l	93	66.443	ENSGGOG00000011778	TRMT1L	62	66.667	Gorilla_gorilla
ENSNBRG00000004053	trmt1l	100	96.296	ENSHBUG00000000622	trmt1l	80	93.501	Haplochromis_burtoni
ENSNBRG00000004053	trmt1l	93	65.772	ENSHGLG00000003135	-	64	62.132	Heterocephalus_glaber_female
ENSNBRG00000004053	trmt1l	94	39.147	ENSHGLG00000012595	-	63	53.412	Heterocephalus_glaber_female
ENSNBRG00000004053	trmt1l	94	39.147	ENSHGLG00100004569	-	63	53.412	Heterocephalus_glaber_male
ENSNBRG00000004053	trmt1l	93	65.772	ENSHGLG00100019412	-	66	63.048	Heterocephalus_glaber_male
ENSNBRG00000004053	trmt1l	100	63.774	ENSIPUG00000008873	trmt1l	73	77.365	Ictalurus_punctatus
ENSNBRG00000004053	trmt1l	94	64.474	ENSSTOG00000010332	TRMT1L	66	62.213	Ictidomys_tridecemlineatus
ENSNBRG00000004053	trmt1l	94	63.158	ENSJJAG00000010929	Trmt1l	64	64.103	Jaculus_jaculus
ENSNBRG00000004053	trmt1l	94	81.851	ENSKMAG00000010310	trmt1l	73	85.138	Kryptolebias_marmoratus
ENSNBRG00000004053	trmt1l	99	85.443	ENSLBEG00000003487	trmt1l	74	85.802	Labrus_bergylta
ENSNBRG00000004053	trmt1l	99	85.443	ENSLBEG00000007982	-	81	85.802	Labrus_bergylta
ENSNBRG00000004053	trmt1l	84	64.496	ENSLACG00000008447	TRMT1L	70	64.496	Latimeria_chalumnae
ENSNBRG00000004053	trmt1l	95	77.352	ENSLOCG00000001781	trmt1l	71	75.506	Lepisosteus_oculatus
ENSNBRG00000004053	trmt1l	95	62.179	ENSLAFG00000004339	TRMT1L	65	62.658	Loxodonta_africana
ENSNBRG00000004053	trmt1l	93	66.443	ENSMFAG00000037592	TRMT1L	65	63.048	Macaca_fascicularis
ENSNBRG00000004053	trmt1l	94	65.789	ENSMMUG00000013879	TRMT1L	69	63.048	Macaca_mulatta
ENSNBRG00000004053	trmt1l	93	66.443	ENSMNEG00000041637	TRMT1L	65	63.048	Macaca_nemestrina
ENSNBRG00000004053	trmt1l	93	66.443	ENSMLEG00000004840	TRMT1L	65	63.048	Mandrillus_leucophaeus
ENSNBRG00000004053	trmt1l	99	87.179	ENSMAMG00000015305	trmt1l	81	83.636	Mastacembelus_armatus
ENSNBRG00000004053	trmt1l	100	96.914	ENSMZEG00005017822	trmt1l	74	96.914	Maylandia_zebra
ENSNBRG00000004053	trmt1l	94	66.460	ENSMGAG00000000930	TRMT1L	76	61.078	Meleagris_gallopavo
ENSNBRG00000004053	trmt1l	94	57.516	ENSMAUG00000019870	Trmt1l	65	58.824	Mesocricetus_auratus
ENSNBRG00000004053	trmt1l	93	67.114	ENSMICG00000009494	TRMT1L	62	67.308	Microcebus_murinus
ENSNBRG00000004053	trmt1l	94	66.887	ENSMOCG00000016453	Trmt1l	62	67.742	Microtus_ochrogaster
ENSNBRG00000004053	trmt1l	100	89.873	ENSMMOG00000016961	trmt1l	75	89.873	Mola_mola
ENSNBRG00000004053	trmt1l	95	69.872	ENSMODG00000007454	TRMT1L	53	70.000	Monodelphis_domestica
ENSNBRG00000004053	trmt1l	99	88.535	ENSMALG00000019306	trmt1l	74	88.820	Monopterus_albus
ENSNBRG00000004053	trmt1l	94	65.132	MGP_CAROLIEiJ_G0014693	Trmt1l	62	66.026	Mus_caroli
ENSNBRG00000004053	trmt1l	94	65.132	ENSMUSG00000053286	Trmt1l	62	66.026	Mus_musculus
ENSNBRG00000004053	trmt1l	93	65.772	MGP_PahariEiJ_G0027929	Trmt1l	61	66.667	Mus_pahari
ENSNBRG00000004053	trmt1l	75	79.661	MGP_SPRETEiJ_G0015500	Trmt1l	57	80.952	Mus_spretus
ENSNBRG00000004053	trmt1l	89	61.832	ENSMPUG00000011859	TRMT1L	65	59.244	Mustela_putorius_furo
ENSNBRG00000004053	trmt1l	93	68.456	ENSMLUG00000001136	TRMT1L	63	68.590	Myotis_lucifugus
ENSNBRG00000004053	trmt1l	94	65.132	ENSNGAG00000011685	Trmt1l	66	62.395	Nannospalax_galili
ENSNBRG00000004053	trmt1l	93	66.443	ENSNLEG00000018030	TRMT1L	62	66.667	Nomascus_leucogenys
ENSNBRG00000004053	trmt1l	74	81.356	ENSMEUG00000011344	TRMT1L	52	82.540	Notamacropus_eugenii
ENSNBRG00000004053	trmt1l	80	60.927	ENSOPRG00000000680	TRMT1L	65	61.682	Ochotona_princeps
ENSNBRG00000004053	trmt1l	93	66.667	ENSODEG00000000826	TRMT1L	61	67.532	Octodon_degus
ENSNBRG00000004053	trmt1l	100	96.914	ENSONIG00000007823	trmt1l	74	96.914	Oreochromis_niloticus
ENSNBRG00000004053	trmt1l	94	68.790	ENSOANG00000001010	TRMT1L	69	69.565	Ornithorhynchus_anatinus
ENSNBRG00000004053	trmt1l	94	63.158	ENSOCUG00000004896	TRMT1L	67	61.364	Oryctolagus_cuniculus
ENSNBRG00000004053	trmt1l	100	88.889	ENSORLG00000029610	trmt1l	78	83.402	Oryzias_latipes
ENSNBRG00000004053	trmt1l	100	88.889	ENSORLG00020002203	trmt1l	74	85.882	Oryzias_latipes_hni
ENSNBRG00000004053	trmt1l	100	88.889	ENSORLG00015021512	trmt1l	74	85.882	Oryzias_latipes_hsok
ENSNBRG00000004053	trmt1l	88	91.111	ENSOMEG00000016275	trmt1l	69	94.737	Oryzias_melastigma
ENSNBRG00000004053	trmt1l	79	75.294	ENSOGAG00000016186	TRMT1L	70	59.770	Otolemur_garnettii
ENSNBRG00000004053	trmt1l	93	68.456	ENSOARG00000003786	TRMT1L	61	68.590	Ovis_aries
ENSNBRG00000004053	trmt1l	93	65.101	ENSPPAG00000029141	TRMT1L	62	65.385	Pan_paniscus
ENSNBRG00000004053	trmt1l	94	66.225	ENSPPRG00000023981	TRMT1L	62	67.097	Panthera_pardus
ENSNBRG00000004053	trmt1l	94	66.225	ENSPTIG00000021754	TRMT1L	62	67.097	Panthera_tigris_altaica
ENSNBRG00000004053	trmt1l	93	65.101	ENSPTRG00000001776	TRMT1L	62	65.385	Pan_troglodytes
ENSNBRG00000004053	trmt1l	93	66.443	ENSPANG00000020890	TRMT1L	61	66.667	Papio_anubis
ENSNBRG00000004053	trmt1l	99	73.006	ENSPKIG00000005941	trmt1l	74	73.653	Paramormyrops_kingsleyae
ENSNBRG00000004053	trmt1l	94	68.085	ENSPSIG00000010011	TRMT1L	70	66.034	Pelodiscus_sinensis
ENSNBRG00000004053	trmt1l	91	70.741	ENSPMGG00000021359	trmt1l	87	70.332	Periophthalmus_magnuspinnatus
ENSNBRG00000004053	trmt1l	94	66.447	ENSPEMG00000000031	Trmt1l	62	67.308	Peromyscus_maniculatus_bairdii
ENSNBRG00000004053	trmt1l	91	62.238	ENSPMAG00000005838	trmt1l	77	57.438	Petromyzon_marinus
ENSNBRG00000004053	trmt1l	95	70.513	ENSPCIG00000002409	TRMT1L	61	71.034	Phascolarctos_cinereus
ENSNBRG00000004053	trmt1l	99	86.709	ENSPFOG00000003872	trmt1l	74	87.037	Poecilia_formosa
ENSNBRG00000004053	trmt1l	99	86.709	ENSPLAG00000010387	trmt1l	74	87.037	Poecilia_latipinna
ENSNBRG00000004053	trmt1l	99	87.342	ENSPMEG00000011828	trmt1l	79	83.402	Poecilia_mexicana
ENSNBRG00000004053	trmt1l	99	86.709	ENSPREG00000002866	trmt1l	74	87.037	Poecilia_reticulata
ENSNBRG00000004053	trmt1l	93	66.443	ENSPPYG00000000416	TRMT1L	62	66.667	Pongo_abelii
ENSNBRG00000004053	trmt1l	79	74.118	ENSPCAG00000008257	TRMT1L	52	75.281	Procavia_capensis
ENSNBRG00000004053	trmt1l	92	35.076	ENSPCOG00000005682	TRMT1L	63	40.890	Propithecus_coquereli
ENSNBRG00000004053	trmt1l	70	75.000	ENSPVAG00000005961	TRMT1L	54	75.000	Pteropus_vampyrus
ENSNBRG00000004053	trmt1l	100	99.367	ENSPNYG00000005607	trmt1l	80	93.501	Pundamilia_nyererei
ENSNBRG00000004053	trmt1l	86	75.709	ENSPNAG00000004389	trmt1l	74	76.647	Pygocentrus_nattereri
ENSNBRG00000004053	trmt1l	94	65.132	ENSRNOG00000002580	Trmt1l	62	66.026	Rattus_norvegicus
ENSNBRG00000004053	trmt1l	94	65.789	ENSRBIG00000042589	TRMT1L	65	63.048	Rhinopithecus_bieti
ENSNBRG00000004053	trmt1l	94	65.789	ENSRROG00000032183	TRMT1L	65	63.048	Rhinopithecus_roxellana
ENSNBRG00000004053	trmt1l	93	67.785	ENSSBOG00000029282	TRMT1L	62	67.949	Saimiri_boliviensis_boliviensis
ENSNBRG00000004053	trmt1l	95	81.053	ENSSFOG00015004878	trmt1l	71	78.093	Scleropages_formosus
ENSNBRG00000004053	trmt1l	64	80.743	ENSSMAG00000015425	trmt1l	72	77.879	Scophthalmus_maximus
ENSNBRG00000004053	trmt1l	100	91.975	ENSSDUG00000021807	trmt1l	80	87.344	Seriola_dumerili
ENSNBRG00000004053	trmt1l	93	91.358	ENSSLDG00000016579	trmt1l	80	87.137	Seriola_lalandi_dorsalis
ENSNBRG00000004053	trmt1l	59	63.816	ENSSARG00000010135	TRMT1L	58	62.898	Sorex_araneus
ENSNBRG00000004053	trmt1l	89	71.812	ENSSPUG00000003927	TRMT1L	78	66.105	Sphenodon_punctatus
ENSNBRG00000004053	trmt1l	98	89.241	ENSSPAG00000008597	trmt1l	74	89.506	Stegastes_partitus
ENSNBRG00000004053	trmt1l	96	61.392	ENSSSCG00000021393	TRMT1L	61	63.931	Sus_scrofa
ENSNBRG00000004053	trmt1l	93	67.516	ENSTGUG00000003737	TRMT1L	74	62.400	Taeniopygia_guttata
ENSNBRG00000004053	trmt1l	86	78.431	ENSTRUG00000002396	trmt1l	86	78.431	Takifugu_rubripes
ENSNBRG00000004053	trmt1l	55	76.221	ENSTNIG00000005534	trmt1l	73	76.221	Tetraodon_nigroviridis
ENSNBRG00000004053	trmt1l	76	54.545	ENSTBEG00000016498	TRMT1L	52	58.642	Tupaia_belangeri
ENSNBRG00000004053	trmt1l	93	67.114	ENSTTRG00000005892	TRMT1L	62	67.308	Tursiops_truncatus
ENSNBRG00000004053	trmt1l	93	66.443	ENSUAMG00000020936	TRMT1L	65	63.235	Ursus_americanus
ENSNBRG00000004053	trmt1l	93	66.443	ENSUMAG00000021919	TRMT1L	61	66.667	Ursus_maritimus
ENSNBRG00000004053	trmt1l	94	65.000	ENSVPAG00000011854	TRMT1L	73	63.445	Vicugna_pacos
ENSNBRG00000004053	trmt1l	93	67.114	ENSVVUG00000009166	TRMT1L	61	67.308	Vulpes_vulpes
ENSNBRG00000004053	trmt1l	92	63.566	ENSXETG00000004539	trmt1l	93	56.067	Xenopus_tropicalis
ENSNBRG00000004053	trmt1l	88	80.000	ENSXCOG00000007372	trmt1l	74	84.513	Xiphophorus_couchianus
ENSNBRG00000004053	trmt1l	99	84.713	ENSXMAG00000003575	trmt1l	81	84.792	Xiphophorus_maculatus